Hippoglossus hippoglossus (Atlantic halibut): 117763611
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Entry
117763611 CDS
T07778
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117763611 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117763611 (exosc6)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117763611 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117763611
NCBI-ProteinID:
XP_034444766
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All DBs
Position
6:complement(3792575..3794391)
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AA seq
275 aa
AA seq
DB search
MPTDTKRVRGPEASQSPSLFVSKPAAAASPALGPRADGRRWDQVDVRPVFVRCGLVSQAK
GSAYMEAGSTKLLCCVYGPKETERKDETDMKCGRLTTDMRFAPFSCPERGSWIQGSQDKD
LSQMLHESLQPAVCLQKYPRSQIDVNVMVLENSGSVLAHAVTCASLALADAGIEMYDLVL
GCSIRQDGDSYVVDPSYTEQNSCSSVNSENQGNLTVAFLPSLNQISGLQSDGEMTEETLT
AGVRTCIEGCYKLYPVIQKALAKAVRRAAPPPSES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgacaccaaacgtgttcgcggcccggaggcgtcccagagcccgtctctgttc
gtgagcaagcccgcggctgctgcctctccggccctcggcccccgagcggacggccggcgc
tgggatcaggtggacgtccggcccgtgttcgtgcggtgcgggctggtgagccaggccaag
ggctccgcgtacatggaggctggaagcaccaagctgctgtgctgcgtgtacggccccaaa
gagaccgagaggaaggacgagaccgacatgaagtgtggaagattaacaactgacatgcgt
ttcgctccgttttcctgcccagagaggggctcttggattcaggggagccaggataaagac
ttatcccagatgttgcatgagagtctgcagccggcggtgtgcctccagaaatacccccga
tctcagatcgacgtcaacgtgatggttctcgagaacagcggctcagttctggcccatgcg
gtcacgtgcgcttccctcgctctcgcagacgcagggattgaaatgtacgatctggtgctc
ggctgttccatccggcaggacggcgactcttatgtggtcgacccgtcttacacggagcag
aacagctgcagctcggtcaacagcgagaatcagggaaatctgactgttgctttcctcccg
agcctgaaccagatttctgggttgcagtcggatggagaaatgactgaagagactctgacg
gcaggagttcggacctgcatcgagggatgttacaaactgtacccggtcatccaaaaagct
ctggccaaggctgtacgcagggctgcccccccaccatcagagagctga
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