Hippoglossus hippoglossus (Atlantic halibut): 117763677
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Entry
117763677 CDS
T07778
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117763677 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117763677 (snupn)
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
117763677 (snupn)
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Ortholog
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GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
117763677
NCBI-ProteinID:
XP_034444918
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All DBs
Position
6:complement(21463425..21469927)
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AA seq
373 aa
AA seq
DB search
MDDLTKALSASFAVSKELNSTAAPHPRLAQYKSKHSVLEQSERRRRFLDLQKSKRLNYVN
HARRLADGDWTGADSDGEEDMEKQDEGEREIDSNAEEDGMEIERRKLPKHYANQLMLSEW
LVDVPSELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVDRTYYILDVMCWRGHPVYDCPTEFRFFWLQSKVGETGGLSEIAKRNP
FRFVSLQSTACTAESIQKALAAEYSFSVDGLLFYHQQTHYTPGSTPLVGWLRPYMVTDIL
GIEVPIGPLTTKPEYASLQLQQILEHKKTSSEVRPANRSGGYELEHLSTPSPDNADSLNF
LNQKPIREANMED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctgaccaaagccctctcggccagctttgctgtgtccaaggagctcaacagc
acagccgccccacaccctcgactggcccagtacaagagcaagcacagcgtcctggagcag
agcgagcggcgaaggcgcttccttgacctgcagaaaagtaaaaggttaaactacgtcaac
catgcgcggcgtctggctgatggggactggacaggggcagacagcgatggggaggaggac
atggagaaacaggacgagggggaacgggagatagacagcaatgcagaggaagatgggatg
gagattgagaggaggaagctcccaaagcattatgccaaccagctcatgctgtcagagtgg
ctggtggatgtaccatcagaactggacactgattggctgatggtggtttgtcctgttggg
aaaagatctctcattgttgcctccaagggttccactgcggcgtacactaaaagcggctat
tgtgtgaaccgtttcccctccctgctgcctggtgggaaccgacacaactctgccatggga
aaagactacacaatcttagactgcatttacagcgaagtggacagaacgtactacatcctg
gacgtcatgtgctggagaggccacccggtctacgactgcccgaccgaattccgtttcttc
tggcttcagtccaaagtcggggagacgggcggcctatcagagatcgccaaacgcaaccct
ttccggtttgtgagcctccaaagcacagcctgcacagcagaatccattcagaaagccctg
gctgctgagtacagcttcagcgtcgatggtctcctcttctaccaccagcagacccactac
actcctggcagcacccctctagttggctggcttcgcccctacatggtcactgacatcctg
ggtatagaggttcccatcgggccgctcaccaccaagcctgagtatgccagcctccagctg
cagcagatcctggaacacaaaaaaacctcaagtgaagtccgcccagccaacaggagcgga
ggctacgagttagagcacctgtccacgccgagcccggacaatgcggactctctgaatttc
ttgaatcaaaagccaataagagaagcaaacatggaggactga
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