Hippoglossus hippoglossus (Atlantic halibut): 117763719
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Entry
117763719 CDS
T07778
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
117763719 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117763719 (rag1)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117763719 (rag1)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117763719 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-RING_10
zf-RING_UBOX
zf-C3HC4_4
TRAF3_RING
U-box
zf-C3HC4_3
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117763719
NCBI-ProteinID:
XP_034444977
LinkDB
All DBs
Position
6:complement(9351415..9358388)
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AA seq
1069 aa
AA seq
DB search
MMEEKLETDGPRSSMPAELHHPQLKYSQWKFKLFRVKSMEKAPMPSEIQPEKEVLSEISP
LAAPNIELDNGVGPGSVMKLCLGGKSQENVEGPGRRVDKKLEEMETHMNHLRCLCRLCGT
ALRKVKGPAHEVQDDLEEASKGVLRQMGCKFTSWPEVILKVFKVDVTEDTESVHPLSFCH
RCWTAAIRGGGFCCFSRTRVPEWKPHSSSCHLCSPKKCSFQRTGRKRRKTTPRVQSLAKR
SRWEHVDNIAVGERKVLKPFGDRHPRPVLRGWRKPSIQREQWVENISHCQKHQLSTKLIS
EKLPVDFLYSFTCMVCDHLLFDPVQSPCGHLFCRSCIAKYNHALGPQCPACNLPCAPDEL
TPPAKAFLSALNSLPLLCPRGGCGERVKLDSFNAHSLDHELNDNNANKQSPELDKFLIAN
KGGRPRQHLLSLTRRAQKHRLKDLKNQVRLFTDREEGGDLKSVCQTLFLLTLRSINEHRQ
ADELEAMMQGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAE
KELLPGFHEFEWQPALSNVSTSCNVGIINGTSGWTSSVDDSPAETVTRRFRYDVSLVSAL
KDLEEDIMEGLSEAGMEDSACTSGFSVMIKECCDGMGDVSEKHGGGPPVPEKVVRFSFTV
MSVSVLADGEEGEVPIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLRPIVAERNAMKE
SRLILSIGGLPRFFRFHFRGTGYDEKMVREMEGLEASGSTYICTLCDSSRAEASQNMVLH
SITRCHEENLDRYEIWRTNPFSESADELRDRVKGVSAKPFLETQPTMDALHCDIGNATEF
YKIFQDEIGEVYAKVKPSREERRSWRAALDKQLRKKVKLKPVMRMNGNYARRLMTMEAVE
VVCELVPSEERREPLRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSSTF
KYRYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFEL
EDVLKHHWLYTSKYLQKFMEAHKGSAKALQGSINPLETLDDENVRVNDF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagaagctggagacggatggccccagatcctccatgccggctgagcttcac
catccccagcttaagtactctcagtggaagtttaagctgtttagggtgaagtccatggag
aaggcccctatgcccagtgagatacagccggagaaagaagtcttgtcagagatctcacct
cttgcagctccaaatatagagttagataatggtgtaggtccagggagtgttatgaaattg
tgccttgggggaaaaagccaggaaaatgtggagggcccaggtcggagggtagataagaag
ctggaggaaatggaaacccacatgaaccacctcaggtgtctctgtcgtctctgtggaacg
gccttgaggaaagttaaaggaccagcgcatgaagttcaggatgatctggaggaggcgagt
aaaggtgtcctgcggcaaatgggctgcaagttcacaagctggccagaggtcatcctcaaa
gtcttcaaagtggacgtgacagaggacacggagtccgtccaccctctctccttctgccat
cgctgctggacggctgccatacgaggagggggcttctgctgcttctccagaacaagagtc
ccagagtggaaaccccactcctcctcctgccacctttgctcacccaagaaatgctcattc
cagcggactgggaggaagaggaggaagactactcccagagtccagagcctcgcaaagagg
agcaggtgggagcacgtcgacaacatcgctgtcggagagcggaaggttctgaaaccattc
ggagaccgtcatccccgccccgtgctgaggggctggaggaaacccagcatccagagagag
cagtgggtggagaatatctcccactgccagaaacaccaactgagtaccaagctgatctct
gagaagctccctgtggacttcctgtattctttcacctgcatggtgtgtgaccacctgctc
tttgatccggttcagtccccctgtggacacctcttctgccgcagctgtattgcaaaatac
aaccacgctctgggacctcagtgcccggcctgcaacttgccctgtgcccctgatgagctc
accccgcccgccaaagcctttttatcagctctgaattctctgcctctgctctgccccaga
ggtggctgtggtgagcgcgttaagctcgactcgtttaacgctcactctctggaccatgag
ctcaatgacaacaatgcaaacaagcagtcaccagaacttgataagttcctgattgccaat
aaagggggacggccccgtcagcacctgctgtcgctaacccggcgtgcccagaagcatcgg
ctgaaggacctgaagaaccaggtgaggttgttcacagacagagaggaaggtggcgacctg
aagtctgtgtgtcagaccctgttcctgctcacgctgagatccataaacgagcaccggcag
gcagatgagctggaggccatgatgcaaggtagaggttttgggttgcatcctgctgtgtgc
ttggccattcgggtcaacactttcctgagctgcagccagtatcacaagatgtaccggact
gtcaaagcgaccagtggccgccagatatttcagccgctgcacaccctccgcgctgcagag
aaggagcttctccctggctttcacgagtttgaatggcagccggctctttcaaatgtgtcc
acctcttgcaatgttggcattattaacgggacctctggatggacttcctcggtggacgac
tccccggctgagactgtcactcggcggtttcgctatgatgtgtcactggtgtcagcatta
aaggacctggaggaggacatcatggaggggctgagtgaggctgggatggaagacagcgct
tgcacctcaggttttagtgtcatgatcaaggaatgctgtgacggcatgggcgatgtcagc
gagaagcacggcggaggaccgcccgttccagagaaggttgtacgtttctccttcaccgtt
atgtctgtctctgtcctggccgacggtgaagagggggaggtccccatcttcaccgagcca
aagccaaactcagaactgtcctgtaagcccctttgtctgatgttcgtggatgagtccgac
cacgagacactcacagctgtcctgaggcctatcgttgccgagcgtaatgcaatgaaagag
agcaggctcatcctatccatcggtggcctgcctcgctttttccgcttccacttccgaggc
acgggatacgatgagaagatggtgcgagagatggagggcctagaggcctcgggctccaca
tacatctgcactttgtgtgactcaagtcgagctgaggcttctcaaaacatggtgctgcat
tccatcacccgctgtcatgaggagaaccttgaccgttatgaaatatggagaacgaaccct
ttctctgagtctgcagacgagctgcgagacagagtcaaaggcgtctcggccaagcccttc
ttggagacccagcccacaatggatgcgttacactgtgacattggcaatgccactgagttc
tacaaaatcttccaggacgagatcggggaggtgtacgcgaaggtcaagcccagccgggag
gagcggcgcagctggagggcagccctggataaacagctgaggaagaaggtgaagctcaaa
ccagtaatgaggatgaatgggaactacgcccgcaggctaatgaccatggaggctgtggag
gtggtgtgtgagctggtgccctcagaggagaggcgggagcccctgagggagctgatgagg
ctctacctccagatgaagcctgtgtggcgagccacctgtccagccaaggaatgccccgac
cagctgtgccgctacagcttcaactcccagcgctttgccgacctcctctcctctaccttc
aaatacaggtacaacggcaagataaccaactacctccacaagaccctggcccacgtgcct
gagatcatagagagagacggatccatcggagcatgggccagcgaggggaacgagtcgggg
aacaaactgttcaggcgtttccggaagatgaacgcacgtcagtcgaagacctttgaactg
gaggacgtgctgaaacatcactggctctacacctccaagtacttgcagaagttcatggag
gcgcacaaaggctcagccaaagctctgcagggtagcatcaaccctttagagacactggat
gatgagaatgtgagagtgaatgatttttga
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integrated database retrieval system
