Hippoglossus hippoglossus (Atlantic halibut): 117763847
Help
Entry
117763847 CDS
T07778
Symbol
vps4a
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03250
Viral life cycle - HIV-1
hhip03272
Virion - Hepatitis viruses
hhip04144
Endocytosis
hhip04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117763847 (vps4a)
03272 Virion - Hepatitis viruses
117763847 (vps4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117763847 (vps4a)
09143 Cell growth and death
04217 Necroptosis
117763847 (vps4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117763847 (vps4a)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117763847 (vps4a)
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
117763847 (vps4a)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
Check point factors
Other check point factors
117763847 (vps4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_22
AAA_14
AAA_5
RuvB_N
AAA_25
IstB_IS21
DUF815
AAA_2
AAA_18
AAA_17
AAA_33
RNA_helicase
PhoH
nSTAND3
nSTAND_NTPase5
NPHP3_N
AAA_28
ResIII
AAA_24
YhdB
Mg_chelatase
AAA_7
Parvo_NS1
NACHT
bpMoxR
PglZ_2nd
Viral_helicase1
Sigma54_activat
TPR_2
Motif
Other DBs
NCBI-GeneID:
117763847
NCBI-ProteinID:
XP_034445187
LinkDB
All DBs
Position
6:1230540..1237265
Genome browser
AA seq
436 aa
AA seq
DB search
MTTSTLQKAIDLVTKATEEDKAKNYDEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKDYLKNKDKQGKKPVKEAQSNDKSDSDSEGENPEKKKLQEQLMGAIVMEK
PNVRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVA
TEANNSTFFSVSSSDLMSKWLGESEKLVKNLFDLARQHKPSIIFIDEVDSLCGSRNENES
EAARRIKTEFLVQMQGVGNNNDGILVLGATNIPWVLDAAIRRRFEKRIYIPLPEEPARSQ
MFRLHLGNTPRSLSEADLRQLAHKTDGYSGADISVIVRDALMQPVRKVQSATHFKKVRGP
SRSNSQIMVDDLLTPCSPGDPAAIEMTWMEVPSDKLLEPIVCMSDMLRSLSTTRPTVNTE
DLFKVKKFTDDFGMEG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcaacactgcagaaagcgatcgatcttgtgaccaaagccacagaagaagac
aaggcaaagaactatgacgaggcgctgcgcctgtaccagcacgcggtggagtacttccta
cacgccatcaagtatgaggcccacagcgacaaggcaaaggaaagcatacgagcgaaatgc
atgcagtacctggaccgggcagagaaactcaaagactacctgaagaataaagacaaacag
ggcaagaagcccgtcaaggaggcacagagcaatgacaagagtgacagtgacagcgaggga
gaaaaccccgagaagaagaagctgcaggagcaactaatgggtgctatcgtgatggagaag
cccaacgtcaggtggaacgatgtggctggactggagggagccaaggaagctctgaaggaa
gccgtcatcctgcccatcaagttccctcatctcttcacaggcaaacggactccatggaga
ggcatcctgctgttcggtcctccggggacggggaagtcttacctggccaaggccgtggcc
acagaggccaacaactccaccttcttctccgtctcctcctcagacctcatgtccaagtgg
ctgggagagagtgagaagctggtgaagaatctgtttgacttggctcgccaacacaaaccc
tcgatcatcttcattgacgaggtggactcgctgtgcggctccaggaacgagaacgagagc
gaggctgcccgccgcataaagacagagttcttggtccagatgcagggtgtgggaaacaat
aacgacggcatcttggtgctgggagccaccaacatcccctgggttttagacgctgccatt
cgcagaagatttgagaagcgaatatacatccctctgccggaggagccagctcggtctcag
atgtttcgtctccatctgggcaacacgccgcgcagcctgagcgaggccgacctgaggcag
ctcgcgcacaaaacagacggctactctggagccgacatcagcgtcattgtccgggacgcg
ctcatgcagccagtcaggaaggtccagtcggccacgcacttcaaaaaggttcgaggtccg
tcacgaagcaacagccagataatggtggacgacctcttgactccttgttcccctggcgac
cctgcagccatagagatgacctggatggaggtgccgagtgacaagctactggagcccata
gtctgcatgtcggacatgctgcgctctctgtccaccacccgtcccaccgtcaacactgaa
gacctgtttaaggtcaagaagttcacagacgactttgggatggagggctga
DBGET
integrated database retrieval system
