Hippoglossus hippoglossus (Atlantic halibut): 117763891
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Entry
117763891 CDS
T07778
Symbol
capn2l
Name
(RefSeq) calpain 2, (m/II) large subunit, like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04141
Protein processing in endoplasmic reticulum
hhip04210
Apoptosis
hhip04217
Necroptosis
hhip04218
Cellular senescence
hhip04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117763891 (capn2l)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117763891 (capn2l)
04217 Necroptosis
117763891 (capn2l)
04218 Cellular senescence
117763891 (capn2l)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117763891 (capn2l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117763891 (capn2l)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
117763891 (capn2l)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C2: calpain family
117763891 (capn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117763891
NCBI-ProteinID:
XP_034445246
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All DBs
Position
1:complement(29885380..29896306)
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AA seq
701 aa
AA seq
DB search
MAGIASTLQQRRDHDRGIGTHDRAVKYLNQDYEALRQRCFESGHLFQDESFPALPSSLGF
KELGAGSYKTRGVTWKRPTELTSEPEFIVSGASRTDICQGALGDCWLLAAIASLTLNEEV
LARVVPHGQSFQEGEYAGIFHFQFWQYGDWVDVVIDDRLPVKDDELLFVHSAEGREFWSA
LLEKAYAKVNGCYEALSGGATTEGFEDFTGGIAEVHDLNKPDPHLFHIIQKALDRGSLLG
CSIDITSSSDSEAVTSQKLVKGHAYSLTGAAEVEYRGDKEKLIRVRNPWGQVEWTGAWSD
DSMNWRYISDEDRERLSHRSEDGEFWMSFTDFLRHYSRVEICNLTPDALSDEGISKWALS
KFEGSWRRGSTAGGCRNFPDTFWTNPQFVIKLEEEDDDPEDGEAGCSFVVGLIQKNRRRK
RKMGEDMHTIGFAIYEVPDEFAGQRAVHLNKNFFLRHASAARSETFINLREVCSRFCLPP
GEYLIIPSTFDPNNNGDFHVRVFSEKQAEFQELDDLIESRVKKVELDEEDVDDRFRGLFG
QLAGEDCEISAFELQKILNKVVTKRSDIQTSGFSVTTCRNMVNLLDKDGSGKLGLVEFKI
LWTKIENFLTIYREKDVDQTGTMSSTEMRVAVEEAGFSLNNPLHQVLVARYSEQDLTIDF
DNFVSCLVRLETMFDTFNTMDRDNSGTIELNIFEWLNVSLL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgcctccaccctgcagcagcgccgggaccatgaccggggtatcgggacc
cacgaccgggcggtgaagtacctgaaccaggactacgaggctctgcggcagcgctgcttc
gagtccggacacttgttccaggacgagtcgttcccggcgctgccctcctccctgggcttc
aaagaactgggggctggatcctacaagacccggggggtgacctggaagagaccgacggag
ctgacctctgagcccgagttcatcgtgtccggagcgtccaggaccgacatctgtcaggga
gctctgggtgactgctggctgctcgccgccatcgcctctctgactctgaatgaggaagtt
ctggctcgagtcgttccacacgggcagagcttccaagagggggagtatgctggaatcttc
cacttccagttctggcagtacggggactgggtggacgtggtgattgacgaccgtctgcct
gtcaaagacgacgagctgctgttcgtccactcagccgaggggagggagttctggagcgct
ctgctggagaaggcctacgccaaggtgaatggatgttacgaggctctgtctggaggagcg
accaccgagggcttcgaggatttcacaggaggcatcgctgaggtccacgacctgaacaaa
ccagatccacatctgttccacatcatccagaaagctctggaccgaggctcactgctcggc
tgctccatcgacatcacgagctcgtccgactcagaggcagttacctctcagaagctggtg
aaaggccacgcctactcattgacaggtgcagctgaggtggagtaccgtggtgacaaggaa
aagctgatccgggtcaggaatccctggggtcaagtggagtggaccggagcctggagtgat
gattcgatgaattggcgttacatcagcgacgaggacagagagcgtctgagccatcgctca
gaggacggagaattctggatgtctttcactgacttcctgcgacattactcccgggtggag
atctgtaacctgacacctgacgctctgagtgatgagggtatctcgaagtgggctctgtcc
aagttcgagggcagctggaggagaggatccactgctggaggctgcaggaattttcctgac
accttttggacgaaccctcagtttgtcattaagctggaggaggaggacgacgaccctgag
gacggcgaggctggctgcagctttgtggtcggtctgatccagaagaaccgcagacgcaag
aggaagatgggagaggacatgcacacgattggctttgccatctacgaggttcctgacgag
ttcgctggtcagagggccgtgcacctcaacaagaacttcttcctgcgtcacgcctccgcc
gctcgctccgaaaccttcatcaacctgcgagaagtctgcagccgcttctgtctgccgccc
ggagagtatctgatcatcccatccacgtttgatcccaacaacaacggagacttccatgtc
cgagtcttctctgagaaacaggccgaatttcaagagttggacgacctcatcgagtccaga
gtgaagaaggtggagctggacgaggaagatgtggacgatcggttcaggggtctcttcgga
cagctggcgggggaggactgtgagatcagcgccttcgagctgcagaagatcctcaacaaa
gtggtgacaaaacgatctgacatccagaccagcggcttcagcgtcacaacgtgtcgcaac
atggtcaacctgctggataaagacggcagcgggaaactgggtctggttgagttcaaaatt
ctgtggacaaagatcgaaaactttctgaccatttacagagaaaaggacgtggatcagacg
gggaccatgagctccacagagatgagagttgctgtggaggaagcagggttcagtctgaat
aatcctcttcatcaggtcctcgtggctcggtacagtgaacaagatctcaccatcgacttc
gacaacttcgtcagctgcttggttcgcctggagaccatgttcgacacgttcaacacaatg
gacagagacaactcaggaaccatcgagctgaacatttttgagtggctgaacgtgtctctg
ctctga
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