Hippoglossus hippoglossus (Atlantic halibut): 117763923
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Entry
117763923 CDS
T07778
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04141
Protein processing in endoplasmic reticulum
hhip04210
Apoptosis
hhip04217
Necroptosis
hhip04218
Cellular senescence
hhip04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117763923
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117763923
04217 Necroptosis
117763923
04218 Cellular senescence
117763923
09144 Cellular community - eukaryotes
04510 Focal adhesion
117763923
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117763923
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
117763923
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C2: calpain family
117763923
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Ortholog
Paralog
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Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
117763923
NCBI-ProteinID:
XP_034445248
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All DBs
Position
1:29908991..29922892
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AA seq
698 aa
AA seq
DB search
MAGVASTLAKQRALAAGFGTNANAVRYLNQDFGSLRAKCRSAGRLFCDPTFAAAPESLGF
KELGQSSHKTRGVTWKRPTELVSNPEFILGGATRTDICQGALGDCWLLAAIASLTLNEYV
MARVVPTDQGFGDDYAGIFHFQFWQYGEWVDVVIDDRLPVKDGELMFVHSAEGREFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENYDLKQPPSNLFQIIKKSLEAGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGAVEVNYRGRQEKLVRIRNPWGQVEWTGAWSDG
SSEWNSVQGDCPNANAEDGEFWMSYSDFLRHYSRIEVCTLTPDTIEDDSVKHWSVSTFDG
TWRRGSTAGGCRNNPYTFWTNPQFVIKLDEEDDDPDDGEVGCSFVVGLIQKNRRKLRKQG
EDMHTIGFAIYEVPKQFQGQREVHLDKNFFLSHAQTAKSETFINLREVSSRFKMPPGEYL
IVPSTFEAHLNGDFCIRVFSEKQSETQPCDDPVEAELEDETVSDEEVDAGFRGLFSKLAG
DDMEISAVELKTIMNKIVGKRTDIKTDGFGMETCRVMVNLMDQDSGNGKLGLGEFATLWK
KVQRYLSIYKKNDSDNSGTMSTPEMRVAFKDAGFSLNNTIYQQLVARYSDPDMTIDFDNF
VGCLMRLEMMFRIFKKLDAHNSGSIELDFNQWINFAMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtggcctccactctggccaagcagcgcgccttggccgcgggcttcgggacc
aacgcgaacgcggttcggtacctgaaccaggacttcggctcgctccgggccaagtgccgc
tccgccgggcggctcttctgcgacccgacgttcgccgccgcccccgagtctctgggcttc
aaggagctgggccaaagctcccacaagacccggggcgtcacctggaagagacccacggag
ctcgtctccaatcctgagttcatcttgggcggagccaccaggacggacatctgccaggga
gctctgggtgactgctggctgttggcggccatcgcttccctgaccctgaatgaatatgtg
atggccagggttgttcccaccgaccagggcttcggtgacgattacgccggcatcttccac
ttccagttctggcagtacggggagtgggtggacgtggtgatcgatgatcgtctgcccgtc
aaagatggagagctgatgttcgtccactcagccgaggggagggagttctggagcgctctg
ctggagaaggcctacgccaaagtgaacggctgctacgaggcgttgtccggaggttcgacc
accgagggcttcgaagatttcacgggaggcatcgctgagaactacgacctcaaacaacct
ccgtccaacctgttccagatcatcaagaagtccctggaggctggagcgctgctgggctgc
tccatcgacataactagcgccgcagactctgaggccgtcactcgccagaagctggtgaaa
ggccacgcctactcactgaccggcgccgtcgaggtgaactaccgtggtcggcaggagaaa
ctggtgaggataaggaacccctggggtcaggtggagtggaccggagcctggagcgacgga
tcgtccgagtggaactctgtgcagggagactgtccaaacgcaaacgctgaggacggagag
ttctggatgtcctacagtgacttcctgcgtcactactctcgtatcgaggtttgcaccctg
acccccgacaccatcgaagacgactccgtcaaacactggagcgtcagcacgtttgacggc
acctggaggagaggatccaccgccggaggctgcagaaacaacccctacacattctggacg
aatccacagtttgtgatcaagctggatgaggaggatgatgacccagatgatggtgaggtg
ggctgcagctttgtagttggtctgatccagaagaaccgcaggaagctgcggaaacaagga
gaggacatgcacaccatcgggtttgccatctacgaggttcccaaacagttccaggggcag
cgtgaggtgcatctggataagaacttcttcttgagccacgctcagacggcgaaatcagaa
accttcatcaacctgcgcgaggtcagttctcgcttcaaaatgcctccaggagaatatctg
atcgtcccatccacattcgaggctcacctgaacggagacttctgcatccgagtgttctcc
gagaaacagtcagagactcaaccgtgtgatgatccagttgaagctgagcttgaagacgag
acggtgtcagatgaggaggtggacgcaggatttagaggcctcttctctaaactcgccgga
gatgacatggagatttctgcagtggagctgaagaccatcatgaacaagattgtcggcaaa
cgaactgacatcaaaactgacggcttcggtatggagacgtgcagggtgatggtcaacctg
atggaccaggacagcgggaacgggaagctcggtctcggagagttcgccacactgtggaag
aaggttcagagatacctgtccatttacaagaagaacgactctgacaactctgggacaatg
agcactccagagatgagagtcgccttcaaagacgcaggtttctccctcaataacaccatc
taccagcagctggtggctcgatactccgaccccgacatgaccatcgacttcgacaacttt
gtgggatgtctgatgaggctggagatgatgttcagaatcttcaagaagctcgacgctcac
aacagcggttccatcgagctcgacttcaaccagtggataaacttcgccatgatctga
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