Hippoglossus hippoglossus (Atlantic halibut): 117764108
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Entry
117764108 CDS
T07778
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00310
Lysine degradation
hhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117764108 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117764108 (prdm2a)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117764108 (prdm2a)
Enzymes [BR:
hhip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
117764108 (prdm2a)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117764108 (prdm2a)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117764108 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2H2_11
Upf2
YscO-like
zf-C2H2_8
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-GeneID:
117764108
NCBI-ProteinID:
XP_034445500
LinkDB
All DBs
Position
7:complement(12030447..12039282)
Genome browser
AA seq
1330 aa
AA seq
DB search
MEPDVIKSLHPDLHKHPHQDTERVWEAFPCQHCERHFTSKQGLERHMHVHALANSEEHVH
ISNNSNMSSGTNQGELQPENMKPLDSVMQHYTSSPASSYTSLLTAGEHIAQPDEQGVHPQ
LAGEEKTQLPVEENLERIFSETAEQITQLGENIASATVIQNVGQHTQYMLDVSSNISENL
SFYIDGKIVSTSTVSSCETSEVHSGSSALVGLDALILDPAQISQVLNADSVTGTEIPGQP
LAKRRTATPPLLPQIKTELESEVVVSSSSSSLVSSLIENLLPLNTESTVVQKERTVFLSP
KLKQLLEKQDGLNPTLALITEGQKPCSPVSLSVLPIGTGRFKRRTGSPTSSQQQNSMSIE
ETPVSDTGNIVAERTGQMETQQISPVHLTASEKDDATPPVEEPAVKPVSTESWPPMTGGN
SCNQQPLDLSNTVRRNEDLALADAVLDLSLQRRLGESGLTINLVSQAVLTEETFNSCMMA
KPFMNIGEQNVSLGNLENSLLTDFAIVTGSDIMTSVEPIAEGLVYGLALPPSSLTPSPAL
QPASPCTIAFASPSSHRMLTSTPSLITVLASSPHITNPSNQPIQMLAPNISPDPLVICTE
NALNPSECDLTAAFAGTNPANLVTLSQPLDPTLNLQGHLFLTDQISLNPSLVESTPVSGV
PFTPTVTLSDSLLNSYNITSNTVLIECTISLETPGSVVPAAITLQESPSEAPVPTQMVVN
HIEQQQIASVPDSPSVDPTILVSSIAESVTLATTTSVVSDCPPVAESSPKPEPVVKAEPP
TTKEEEAADDTLSAPDTPSQTSPLTEKAEEDISSYNIPGDAQQQTFTKNFICNVCDKLFH
SMKELGQHVGDHADEWPYKCEFCVLLFGKPSALLDHRSSLHGVGKTYVCSACTKEFVYLC
NLKQHQEELHPCQQCTYTEEEKGKLRPQNYNNSTKVSVEPSVPHISEEAKTMVKKEESEV
DVAAEELFTTIKIMASDGGKFKGPDVRFGINQHYPSFKPPPFPYHNRSPAGLVASATNFT
THNIPQTFTTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIPLRHFAKTQN
GVLSTTNSTNGLNASNRASQSNRSKSHQDSPIKMKFKLLNKRKKKFVQRVMPQRNKSVSS
SNKATSAQVDVQVFVCPHCNREFSMRRSRTKHMAVCPKKPKEVKKRKEGGISVTKENNGR
LHRGISRGAEKQQASPQHKTRFQTSSLAKRPAILPVQTVFSNKRSKIIIKESMQPKQESP
TLNELPIVRTFNPSMRQYSRVQHGVKGIPIKITIVKPQQTAPQKDELLPAQSREEGTGAV
TSSSEQSVKT
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagacgtgatcaagtctctacacccagatcttcacaaacatccccatcaggat
actgagagagtgtgggaggcttttccctgtcagcactgtgagagacattttaccagcaaa
caaggcttggagcgacacatgcacgtccatgctttggctaacagcgaggaacatgtacat
ataagcaataacagcaacatgtcttcaggtacaaatcaaggggagttgcagcctgagaat
atgaagcctttggattctgtcatgcaacattatacttcatcccccgctagctcttatact
tccttgttgacagccggagaacacatcgctcagccggacgaacagggggtacacccgcaa
cttgctggtgaagagaaaacccagctacctgtggaggaaaatcttgagaggattttcagt
gaaacggctgaacagataacacagcttggtgaaaatatagcatctgcaactgttattcag
aatgtagggcaacacacacaatacatgctagatgtctctagcaatatttcagagaatctc
agcttctacattgatggaaagattgtgtcaacaagtacagtaagtagctgtgaaacatct
gaggttcattcaggttcctcggctttagttggactggatgccctgattctggaccctgcc
caaatcagccaggttctgaatgcagattcagtcacaggcacagagatacctggtcaacca
ctggctaagagaagaactgcaacaccacctcttttaccacaaattaaaacggaactggag
tctgaggtggtggtgtcctcttcctcatcatcgcttgtgtcatctttgattgagaatctg
cttcccctgaatacagagtccacagttgtgcagaaagaaagaacggtgtttctgtcccca
aagctgaagcagctactggagaagcaggatggccttaacccgacactcgccctgatcaca
gagggtcagaagccttgttcgcctgtctctctctccgtccttcccattggaacaggaagg
tttaaaagacggaccggatctccaacaagctctcaacagcaaaactcaatgtccatcgag
gaaacgccagtgtcagacaccggaaatattgttgctgaaagaacaggacagatggagacc
cagcagatctcccctgtgcatctaacagctagtgagaaagatgatgctacaccacctgtg
gaggagccagcagtgaaacccgtctcaacggagagctggccccccatgactggtggcaat
tcctgtaaccagcaaccactggatctctctaatacagtcagaagaaatgaagatttagcg
ttagctgatgctgtgctggatttaagtttgcagagaaggctaggcgaatctggactgaca
ataaatttagtctcacaggcagttttgacagaagaaacattcaattcatgcatgatggcg
aaaccctttatgaatatcggagagcaaaatgtaagcctgggaaatctagaaaattcttta
cttacagactttgccatagtcacagggtcagatataatgacctcggttgaacctattgca
gaaggtcttgtttatggacttgccctaccccccagttctctaaccccatcacccgccttg
caaccagcctcaccgtgcactattgcatttgcctccccatcctcacacagaatgctcact
tctactccttcattaatcacagttttggcttcatcaccacatattacaaacccttcaaac
caaccaatccagatgttagctccaaacatatctcctgaccctttggtcatctgcacagaa
aatgcactgaatccttcagagtgcgatttaaccgctgcatttgccggaacaaatcctgca
aaccttgtcactctctcccaacccctggaccccactttaaatctacagggccacttgttt
ctcactgatcagatttctctcaatccgtctctagttgaatccactcctgtgtcgggggta
ccgttcacacctactgtaactttaagtgactccctcctcaactcttataacataaccagt
aacacagtgttgatagagtgcacaatatctcttgaaaccccagggagtgtggtccctgct
gcaattaccttacaagaaagcccttctgaggctccagtacctacacagatggtcgttaat
cacatcgaacagcaacagattgcatcagtgcccgactctccatctgtggaccccactatc
cttgtgtcctccatcgcagaatcagtaactctggccaccaccacctcagtggtatctgat
tgtcctcctgtggctgaatcgagtcccaaaccggaacctgttgttaaggcagagccgccc
accacaaaagaagaggaagctgctgacgatactctttccgcacctgatacaccatcacaa
acttcacctttaactgagaaagcggaagaggacatatcctcatataacataccaggtgat
gcacaacagcagactttcaccaagaatttcatctgcaatgtgtgtgataagcttttccat
tcaatgaaagaactaggccaacatgttggtgaccatgctgatgaatggccctacaaatgt
gaattctgcgtgctgctctttggaaagccctccgctttgctcgaccatcgatcaagcctc
cacggtgttggcaagacttacgtttgcagcgcgtgtacaaaagaatttgtctacctctgc
aatctgaaacagcatcaggaggaattgcatccttgccagcagtgcacatacacagaagag
gaaaagggaaaactaagacctcagaactacaacaactcgacaaaggtcagtgtggagcct
tcagtgccccacatttcagaggaagccaagacaatggtgaaaaaggaggaaagtgaagta
gatgtggctgctgaagagttgtttacaaccataaaaataatggcctccgatggagggaaa
ttcaaagggcctgatgttcggtttggcattaaccaacactatcccagctttaagcctcct
ccatttccttaccacaataggtcgcctgccggcttggttgcttcagccaccaacttcacc
acccacaacatcccacagacctttactacagctattcgctgtaccaagtgtggaaaaagc
ttcgataacatgccagagctacacaagcatattctcgcgtgtgcaaatgccagtgataaa
aggcgatacacacccaaaaagaatcccatccctttaagacactttgcaaaaactcagaat
ggagtactgtcgactactaattctactaatgggcttaatgcttcgaacagggccagccag
tcaaacaggtccaaatctcaccaagactccccaataaagatgaaattcaaattactgaac
aaaaggaagaaaaagtttgtccaaagggtaatgccacagaggaacaagtccgtttcttct
tcaaataaagcaacgtctgcacaggtggatgtgcaggtatttgtctgcccacactgtaac
agggagttctcaatgcgtcgcagcagaaccaaacacatggccgtgtgccccaagaaacct
aaagaggtgaagaaaagaaaagaaggtggaatctctgtgacaaaggagaacaacggccgc
ctgcaccgagggatttctcgtggcgcagagaaacaacaagcctcacctcagcataaaact
agattccagacttctagcctcgccaagaggccggccatccttccagtgcagactgtcttt
tcaaacaaaagaagtaaaataatcataaaggagagcatgcagcccaaacaagagagccca
actctcaatgaacttcctattgttcgcactttcaatccctcgatgcgccagtacagccga
gtgcagcacggcgtcaaaggaatccctattaaaatcaccatagtgaaaccgcagcagact
gcaccacagaaggatgagctgcttcccgcccagagccgagaggaaggcactggagccgtt
accagcagctctgagcagagcgtgaagacttga
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