Hippoglossus hippoglossus (Atlantic halibut): 117764130
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Entry
117764130 CDS
T07778
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117764130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117764130
03036 Chromosome and associated proteins [BR:
hhip03036
]
117764130
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117764130
Coactivators
SAGA/TFTC/STAGA complex
117764130
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117764130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Utp11
Motif
Other DBs
NCBI-GeneID:
117764130
NCBI-ProteinID:
XP_034445561
LinkDB
All DBs
Position
7:20583505..20595604
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AA seq
845 aa
AA seq
DB search
MDGTPSPAGPSLTPAQSQPKAAAASGVVAVSSDGLAGKPAAAGVETLNGGTVVVRCHVPA
SSPQAAVTRVNNGPVPAAASAASGAIIRTTSSPVTSPVIPPQPCVNTAPTVTLVRPPMQT
PTNASPSGGNPAPAATAPAGCVVNKWDSTKTVMQTTAATTGSIVRSPTVLQSPRTSVQIA
AAPTPGVVRAIAPQVLAPRLTQPQPNAPNIQNIQLPPGMVLVRSESGQLLMIHQQTLAQM
QAQSQSQSAMTPRPAAPTSTPPVQINSLQAPGAASLLTRSVAPTTIIKQGSTAQTTVTPT
TKLQRPPVLQNTIMLGGTAASPGQPLGTSTTVQPGSAATTVTQRAGPLRAPGASAPIAIT
AETLENVKKCRNFLSTLIKLASSGKQSSETTASVKELVKQLLEAKIEPEDFTSRLYKELN
SSPQPYLVPFLKRSLPALRQLTPDSEAFIQQSLLPQPSTQAAATASKALTAVVLRPPIST
ATTVATSSTGNKTTVISLPQMPHSKTVLQHGTIVRPQVTVAQSPMVTLRGQPHSRIIVGQ
PQVVKQLQTVPAVRHMFVPGTKGVQVVSQTLLTAAQRNKLMEAGGGTFRDDDDINDVASM
AGVNLSEESARILATNSDLVGAVTRSCKDEAFLSTSPLTRRALEIGKKFGISELGSDVIN
FISHATQQRLQSLLEKVSLVAQQKNVTFKEDERHVQVSDVRTQLRYFEQLDQVEKQRKEE
QEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREANLTALAAIGPRKKQKM
YSPVRGASAEGSGSGPCQPAGSGGGGSRQFMRQRITRVNLRDLLFCLENERGTSHSHLLY
KGFLK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaccccatcaccggcgggaccgagcctgacacccgcgcagagtcagcccaag
gcggcggcggcgagcggggtcgtcgcggtctcctccgatggactagctgggaaacctgca
gctgctggtgttgaaactttgaatggaggcaccgtggtggtgaggtgtcacgtccccgcc
agcagcccgcaggcagctgtcacgcgtgtaaacaacggacccgtccctgcagcggcgtct
gcggcatccggtgccatcatacggactacttcttcccccgtgacctcccctgtgatcccc
cctcagccctgcgtgaacactgcccccacggtcacgcttgtgaggccgcctatgcaaact
cccactaacgcctcgccaagcggagggaaccccgctccagctgcgacagcaccggccgga
tgtgttgtcaacaagtgggactccacaaagaccgtgatgcagaccactgctgccacgacg
ggctcgatcgtgaggagcccgactgttctgcagagcccgaggacttcggtgcagatagct
gccgctcctactcccggggtagtacgagccattgctccgcaggtgttggcccctcgactc
actcagccccagccaaatgccccaaatatccaaaacatccagctccctccaggcatggtc
ctggttcgcagtgagagtggacagctgctgatgattcaccagcagaccttggctcagatg
caggctcagtcgcagtcccaaagcgccatgacaccacgacctgcggcccccacaagcact
ccacctgtccagatcaattctctacaggctccaggcgcggcgtcgctgctgactcgttca
gttgcccccaccactatcattaaacaaggttccacggcccagaccactgtgacgcccacc
accaaactgcagaggccgcccgtactgcagaacaccatcatgctgggaggaacggccgcc
agcccgggtcagccgctaggaacgtccaccactgtacagcctggatctgcagccacaact
gtgacacagagggcagggcccctcagggcccctggggcctccgctccaatagctatcaca
gctgagacacttgagaatgtgaagaagtgtaggaactttttgtccacgctgatcaagctg
gcatccagtggaaaacagtcctctgagaccacagccagcgtcaaggagctggtcaagcaa
ttgctggaagcaaagatagagcctgaagatttcaccagtagattatacaaagagctgaac
tcgtcgccacagccgtaccttgtgcctttcctgaagagaagtctccctgcactgcgtcag
ttgaccccagactcagaggccttcattcagcagagcctgctgccgcagcccagcactcag
gcggctgccacagcctccaaggccctcaccgctgtggtgctgcgacctccaatctccacc
gccaccactgtagccaccagctccaccgggaacaaaaccacagtcatcagcctccctcag
atgcctcacagcaaaacagtactgcaacacgggactatagtgaggccacaggtgacagtg
gctcagtctcccatggtaacactccgaggtcaaccccacagccgcatcattgtgggccag
ccgcaggttgtcaaacagctgcagacagttccggctgtgaggcacatgtttgttccgggg
actaaaggagtgcaggtcgtcagtcagacccttctcactgccgctcagaggaacaagctg
atggaagcaggaggaggaaccttcagggatgatgatgatatcaacgacgtggcctccatg
gcaggagtcaacttgtcggaggagagtgcccgtatcttagcaaccaactctgaccttgtt
ggtgcggtgactcgctcctgcaaggatgaggccttcctctccacctctccactcacccgg
agagctctcgagatcggtaagaagtttggtatcagcgagttgggctcagatgtgatcaac
ttcatctcccatgctacgcagcagcgactgcagagcctgctggagaaggtgtcactcgtg
gcgcagcagaagaacgtaactttcaaggaggatgagcggcacgtgcaggtcagcgatgtg
cgaacccagctccgatacttcgagcagctggatcaggtggagaagcagaggaaggaggag
caggagagagagatcctcctgaaggctgccaagtcccggtcacgacaagaggaccccgag
cagctgagactcaaacaaaaggccaaagagatgcagcagcaggagctggctcagatccgg
cagagagaagccaacctcacggcgctggcagccattggcccaaggaaaaaacaaaaaatg
tactctcctgttcgaggtgccagtgcagagggctccgggtcagggccctgccagcctgcg
ggctccggtggagggggctccagacagtttatgcgacagcgcatcaccagagtcaacctc
agggacctgctcttctgcctggagaatgaaagagggaccagtcactcacacctactctat
aaaggcttcctcaaatag
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