Hippoglossus hippoglossus (Atlantic halibut): 117764139
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Entry
117764139 CDS
T07778
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117764139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117764139
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117764139
GBAF(ncBAF) complex
117764139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
117764139
NCBI-ProteinID:
XP_034445573
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Position
7:complement(20570741..20579295)
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AA seq
379 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHYLIQCIMDYQSKGKTAECTQYQQVLHRNLVY
LATIADSNQNMQSLLPAPPTSSMPMGPGGMGPSGGHAPSNLNDTMAPGLAPTSMMQSQMS
NGSSHAPMQQQSGQTQSALPSTALSLPASSYGGSASASSSASGYSHAAPSSQGSMIQSPG
YGSSSSSSSSSSCSNLNMQSNQVSMMHQQSATPQYSSAQAGGQHYQGQQVMGMMGQGSQG
NSLMTQRPIGSYRSSQQGHGEFSYQQSSYGEQGYDRSFDETSQHYYEGGNSQYSQQQAQY
QQSSGQQQSFSQQQYSSQQGYTGQPQGYGPGQGGSSQYAQYQQGQSQQYGSYRSSQGGPG
AQTQRPYAYEQGQYGNFQQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttttcgtcggcgcgccccaggagtaaaggggaggtgacgcagcagacg
atccaaaagatgctggatgaaaatcattatttaatacaatgtataatggactaccaaagc
aaagggaagacagctgaatgcacacagtatcagcaggtcctgcacagaaaccttgtctac
ttggccacgatagcagattcaaatcagaacatgcagtcacttctacctgcgcctcccact
tccagtatgccaatgggtcctggagggatgggtccgagtggggggcacgctcccagcaac
ctcaacgacaccatggccccgggactggcccccacatcgatgatgcagagccagatgagc
aatggctccagccatgcccccatgcagcagcagtcgggtcagacgcagtcggcccttccc
tcgacagccctcagcctgccagccagcagttacggtggctcagcctcggcctcttcctcg
gcctccggctacagccatgctgcaccctcctcccagggcagcatgattcagagccctggt
tatggctcttcctcctcctcctcttcctcctcctcctgcagcaacctcaacatgcagtcc
aaccaagtctccatgatgcaccaacaatctgccactccgcagtactcctcagctcaggct
gggggccaacactatcagggacagcaggtcatgggcatgatgggtcagggcagtcaagga
aacagtttgatgactcagaggcccattggatcctaccgctcttcacagcaaggtcacgga
gagttctcatatcaacagtcttcatacggcgagcaaggctacgacaggtcattcgacgaa
acctcacagcactactacgaaggaggtaactctcagtacagccaacagcaagcccagtat
cagcagagctctggccagcagcagtccttcagccaacagcagtactcgtctcaacaaggc
tacacaggacagccacagggatacgggcctggccagggtggatcctcccagtatgcacag
tatcaacagggtcaaagccaacagtatggttcctaccgctcgtcccagggaggccctgga
gcacagacacagaggccctacgcttatgaacagggtcagtatgggaattttcagcaataa
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