Hippoglossus hippoglossus (Atlantic halibut): 117764181
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Entry
117764181 CDS
T07778
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117764181
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hhip00537
]
117764181
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
Contactins
117764181
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hhip00537
]
Others
117764181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_4
Izumo-Ig
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
117764181
NCBI-ProteinID:
XP_034445652
LinkDB
All DBs
Position
7:12752846..12791061
Genome browser
AA seq
1026 aa
AA seq
DB search
MTLLWKQFLLLSIIDCLADCLDSGSYHGPRWRMEPGDLFIPVDSIEEEATLTCDAKGTPP
PQYRWSLNGTLINLGQDPRRRLSGGNLIISSLDRQQDVGVFQCMAYNTVGAILSRRASLQ
FAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLSYAWIFNEYPYFVQQDNRRFVSQQ
TGNLYISKVEPSDVGNYTCVVMNSVTKGKVHSSPTSLILRTDGVMGEYEPKIEVNFPDNV
PAAKGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDAGGYEC
LAENKMGKNTATGRLAFYAKPQWIQTMKDTALAIEERLYWECRANGKPKPSYTWLKNGQQ
LLSEGRIHVEDGVLSVSALTLSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRA
LLKAKAGSTVTLECKPQAYPIASILWKKGNLPIHTNDRITLSPDGTLRLANVSKSDAGSY
TCFARNRFGMSSTTGRLLVTDPTRIIQGPVNMEIIVGESIVLPCQVASDPVLDVSFSWAF
NGQLIAKGDGHFEHVGGRTAGDLMIRNIQLFHAGKYICVVDTDVESLSAVAVLIVKGPPS
PPDSVTVEEVTDSTAQLTWSPGRDNGSPITNYLIQTRTPFTVGWQRVNTVPEIIYGNTLT
ATVVDLNAWVEYEFRVLAKNSVGVGEPSPVSVKTRTEDAVPDAAPGDVGGGGGSRSELVI
TWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPGASRYVYRNDSILPFSPFHVKVG
TYNSKGQGPFSPVVTIYSAEIEPSGMPAGVWARSVSASEIEVNWQAISFTPERVLGYEVV
YWEDDTKPETMGKVRVPWNQTSVTVSGLAGNTQYFLTVSAFNTAGTGPFLPAINVTTKKP
PPAQPPLNIEWTLIGSQLSLYWEPVVAMESECEVTGYQLSYRRQRHKEVNTLTTSNCTAE
LTLPEDDDDYIIHIQTLSEGGLGPASDPIRIHQLSMSARGSRAWSLDISPLSLILTLAIS
TFRSTS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgctatggaaacagtttctgctgttatcaatcattgactgtctggcagattgt
ctagacagtggatcatatcacggtccaagatggaggatggagccaggtgacttgttcatt
cccgtcgactccatagaagaagaggccactctgacttgtgacgctaagggaacgcctcct
ccacagtacagatggtcactgaatgggaccctcataaatctgggccaggatccccggcgg
cgtctgtctgggggcaacctcattataagcagcctggaccgccagcaggatgtgggggtg
ttccagtgtatggcctacaacactgtaggagccatcctcagccggagagccagtctgcag
tttgcctacttagatcatttcaaagtccacaccagaagcgcggtgtcagtccgagaggga
caaggagtggtgctactttgtggaacgcccacatcctcaggagacctttcttatgcatgg
atcttcaacgagtatccatactttgttcagcaagacaatcggcgtttcgtgtcccagcag
acgggaaacctttacatttccaaggtggagccctcggatgtgggtaactacacttgcgta
gtgatgaacagcgtcacgaagggcaaagttcacagctcacctacgtctctgatcctcagg
acagacggagtgatgggtgaatacgagccaaaaatagaagttaatttcccagacaatgta
cccgccgctaaaggatcaacagttacactggagtgtttcgcccttgggaaccccgtccca
gagatcacctggaagagggcgaacggcgtgcccttccccagcaaagtcaagatgaagtac
tcgaatgccgtgctggagatccccagcttccagcaggacgacgccggagggtacgagtgc
ttggctgagaacaagatggggaagaacacagccaccggtcgacttgctttttatgccaag
cctcagtggatccagaccatgaaggacacggccctggccatagaggagagactgtactgg
gagtgtcgagccaatggcaagcccaagccctcctacacgtggctgaagaacggccaacag
cttctctccgagggcaggatccatgtggaggacggagtcctgtcagtgtccgcgctgaca
ctctctgacgccggcatgtaccagtgtgtggctgagaataaacacggtgtcatatatttc
gctgctgagctgatggttttagcttctcctccagacttcacagggaacgtcctcagagct
ttgctcaaagccaaggcaggaagtacagtgactttagagtgtaaacctcaggcctatccc
atcgccagcatcttatggaagaaaggaaacctgcccatccacaccaacgacaggatcaca
ctttctccagatggaacgctgaggcttgccaacgtgagcaagtcggacgcgggcagctat
acgtgcttcgctcggaatagatttggcatgtcgagcacgacaggacggcttctcgttacc
gatccaaccagaatcatccaggggcctgtgaacatggagatcatcgttggcgagagcatc
gtgttaccgtgtcaggtcgccagtgaccccgtccttgacgtttccttctcctgggccttc
aacggacagctcatcgccaagggagacggtcactttgagcacgtgggtgggcgcacagcg
ggagatctgatgatcagaaacattcagcttttccatgccggcaagtacatctgcgtggtg
gacacagacgtggagagcctgtcagctgtggctgtattgattgtgaaaggcccccccagc
ccaccagactctgtgacggtggaggaggtgacagacagcacagctcagctgacctggagc
ccaggcagagacaacggcagccccatcaccaattacctcatccagaccaggacccccttc
actgtgggctggcagagggtcaacacagtccctgagataatttatgggaacacgctgaca
gccactgtggtcgacctcaacgcctgggtggagtacgagtttcgggttttggccaagaac
agcgttggagtcggagaacccagccctgtgtccgtcaagaccaggacagaggacgcagtc
cctgatgcagctcccggtgacgtgggcggaggaggcggaagcagatctgaactggtcatc
acatgggagcctgtccccgaagaactgcagaatggtgagagctttggttacatcattgct
ttccgcgccttcggagaagtcagctggacccacgtggccacctccgcccccggcgcgtcg
cgctacgtgtaccgcaacgacagcatcctgcccttctctccgtttcatgtcaaggtcgga
acttacaacagcaaaggacagggtcccttcagccctgtggtcaccatctactctgcagag
atagagccaagtgggatgccagcaggagtttgggccagaagtgtctcagcctccgagatt
gaggtgaattggcaggcgatctccttcacccctgaaagagttctgggctacgaggtggtt
tactgggaggacgacacaaaaccggagaccatggggaaggtcagggtgccttggaaccaa
acctcggtcacagtgagcggcttggctggaaacacgcagtatttcctgacagtcagcgcc
ttcaacacagcggggaccggccccttcctccctgcaatcaatgttaccacaaaaaagccc
ccaccagctcagcctccactcaacattgaatggactctaattggctctcagctgtctctt
tactgggaacctgtggtggctatggaatcagagtgtgaagtaacgggctaccaactgtca
tacaggaggcagagacacaaagaggtaaacacactcacgacatccaattgtacagcagag
ctgaccctccccgaggacgacgacgactacatcatccacattcagactctgagtgaagga
gggctcggcccggcctcggaccctatacgaatccaccaattaagtatgagtgcccgtggc
tcgagagcctggagcctggacatctcgcccctctccctgatcctcaccctcgcaatatca
acattcaggtcaacgtcatga
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