KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117764197
Entry
117764197         CDS       T07778                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hhip01009]
    117764197 (kdm5bb)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hhip03036]
    117764197 (kdm5bb)
Enzymes [BR:hhip01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117764197 (kdm5bb)
Protein phosphatases and associated proteins [BR:hhip01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117764197 (kdm5bb)
Chromosome and associated proteins [BR:hhip03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117764197 (kdm5bb)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHDvar_NSD PHD-1st_NSD PHD_2
Other DBs
NCBI-GeneID: 117764197
NCBI-ProteinID: XP_034445667
LinkDB
Position
7:complement(23555853..23570743)
AA seq 1537 aa
MSQPRPDEFQPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKVRPPPGWQPPFACD
VDRLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCALKIPHVERKILDLYKLNKLV
ADDGGFDLVCQDRRWTKIAHTMGFAPGKAVGSHLRGHYEKILYPYNLFQSGANLLAPEAA
SKLMRLEADPELDECVQKPVQSVESTGSLESEDTKELKLQDPAQRPTAQTPDTCPSARRA
KRMKCEAMCVKTEPGEPGESKPNLRRRMGSFVAKPEPAEKEIPILVKVEPVEIKEPIIEA
DKSKSRYKKFIPPVPPSPVDLVVCLVCGSGGDEDRLLLCDGCDGSYHTFCLIPPLHDVPK
GDWRCPKCLAQECNKPHEAFGFEQAYRDYSLRAFGQMADAFKSDYFNMPVHMVPTELVEK
EFWRLVGAIEEDVTVEYGADIASKEFGSGFPIPNGKLKLSQADEKYLKCGWNLNNLAMMN
PSILTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAE
QLEEVMKKLAPELFESQPDLLHQLVTIMNPNTLMAYGVPIYRTNQCAGEFVITFPRAYHS
GFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRMLHRYNVFSHDEMVCNMASKAGTLDVVLA
SAVHKDMVAMLREEKEIREKVKKMGLVHCKEARYDHLQDDERQCVKCRTTCYLSAITCPC
SPGVLVCLHHINDLCSCPVSNYTLNFRYTLDKLFPMMNAVKQRSERYDEWASRVAETLEA
KLEKKRGLPVFRSLLAESETRLFPENDLLRRLRLVTKDAEKCSSVAQQLLNGKRQTRYRC
GSGKSRSQLTVEELSSFVRQLYNLSCCLPQAPKLKVLLNRIEDFQQHSEKVLADQVPSVA
EIQSLLDVSFEFDVDLPELPRLRVRLEQARWLEAVQQASAQPAALTLETMRRLIDQGVGL
SPHPSVEKAMARLQEQLTVSEHWEDKASGLLKARPPHSIETLSAAAEKASGLTAHLPNCL
LLKDTIRKAREWLQEAEELQATGCILMVDSLSDMVLRGHAIQVHLEPLDQLESLMVEVQE
WKDSAATTFLQTDSALTLLEVLSPRIDFGNIGSPKRKIKKGKESPKSNKKKTPGLNSLTD
VERALSEHKDSTSAMATLEELQVREMEAFSNLRAANESKLLPTADCMDLKVCVCQKAPMG
AMLQCELCRDAFHSVCVRDTSDPCKTQPWLCPQCQRAEKPPLNKVLSLQSSLRRIGVRLP
EGDALHHVVERTLNWQHEAQQISKMCNLPELEERPATPPTLTSWVSGSHETQDNTQAPSL
TPEWNRTSHAQTVFYTEQRCIPLQGLSRELEELMVEGLLLQVSLPEVQSLYHTLLDRATS
QQTNRCMLPPQDEAADADVHTQFNSQGKNLPLNQEGVNAMRDIMTGSEKKVKRHLDNKKH
SHKRQKINKKNLQRRTASTSSSPRSDFSQSDESDEEMAVCPAERCQLPEGDEVNWVQCDG
SCNQWFHQVCVGVTAEMAEKEDYICVRCTLSDGHMRK
NT seq 4614 nt   +upstreamnt  +downstreamnt
atgagccagcctcggccggacgagttccagcctcctccggagtgcccggtcttcgagccc
agctgggaggaattcgccgaccccttcgccttcatcaacaagatccgtcccatcgcggag
aaaacgggcatctgcaaagtccggccgcccccgggttggcagcctccatttgcctgtgat
gtggacagacttcactttgttcctcggatccagaggctcaatgaactggaggcccagacc
agagttaagctcaacttcttggaccagattgccaaattttgggatctgcagggatgtgcc
ctgaagattcctcatgtggagaggaagattttggatctgtataaactaaacaagctggta
gcagatgatggtggttttgacctcgtctgtcaggacaggcgatggactaagattgcacac
acaatgggcttcgctcctggcaaagcggtcggctcacacctgcgagggcattatgagaaa
atcctctacccgtacaatctgttccagagtggagcaaacctgctggcaccagaggcagct
tccaaactgatgcgtttggaggctgatcctgaacttgacgagtgtgttcagaagcctgtc
cagtcagtagagagcacaggaagcctggagagcgaggacaccaaggagctcaagctgcag
gacccggctcagaggccaactgcccagacgcccgacacgtgccccagtgctcgcagagcc
aagcgcatgaagtgtgaggccatgtgtgtgaagactgaaccaggagaacctggggagagc
aagcccaacctgaggcggaggatgggttcgtttgttgccaagccagaaccagcagaaaaa
gaaattcccattcttgtgaaagtggaaccagtggaaattaaagaaccaataattgaagca
gacaaatcgaaatcacggtacaagaaattcatccccccagttcctccgagtccagtggat
ctggttgtgtgtctggtgtgtggcagcgggggagatgaagaccgtctgttgctgtgtgac
ggctgtgacggcagctatcacactttctgcctgatccctcctctgcacgacgtccccaaa
ggagactggaggtgccccaagtgtctggctcaggaatgcaacaaacctcatgaggcattt
ggctttgaacaagcatacagagactactccctgcgtgcttttgggcaaatggcagatgct
tttaaatcggattacttcaacatgccagttcatatggtacccacagagctggtggagaag
gagttctggcgtttggttggagccattgaagaggatgttaccgtggaatacggagcagat
atagcctcaaaggagtttgggagtggattcccaattcccaatggaaaattaaagctctcc
caagctgatgagaaatacctcaagtgtggctggaacctcaacaacctggcgatgatgaac
ccctctatcctgactcatgtgactgctgacatctgtgggatgacgctgccatggctttat
gttggcatgtgcttctcctccttctgctggcacattgaagatcactggagctactccatc
aactacctgcactggggagaacccaaaacctggtacggagctcctggctttgcagcagaa
cagctggaggaagtgatgaagaaactggccccggagcttttcgagtctcagcctgacctg
ctgcaccaactagtcaccatcatgaaccccaacaccctgatggcctatggagtcccaatt
tacagaacaaatcagtgtgctggtgaatttgtcatcacgtttcccagagcttaccacagc
ggcttcaatcagggcttcaactttgctgaggcagtcaacttctgcactgtggattggatg
cctcttggcaggcagtgtgtggaccactatcgaatgctgcaccggtacaacgtgttctcc
catgatgagatggtgtgcaacatggcctcgaaagcaggaacacttgatgtggtcctggcc
tccgccgtccacaaggacatggtcgccatgctccgagaggagaaggaaatcagagaaaaa
gtcaagaaaatggggctggttcattgcaaggaggcaagatatgaccacctccaggatgat
gagcgacagtgtgtcaagtgcaggaccacctgctacctgtctgccatcacctgtccctgt
agcccaggggtactggtctgtctgcaccacatcaacgacctgtgctcctgccccgtctcc
aactacacactgaatttcagatacacactggacaagctgttccccatgatgaatgctgtg
aagcagcgatctgagcggtacgacgagtgggcctcccgtgtggccgagactctcgaggcc
aaactggagaagaagagaggcctgccagtctttcgctccctcctcgctgaatcagagacc
aggctgttccccgagaacgacctgctgcgtcggctgcgtctggtcacaaaagacgcagag
aagtgctcctcggtggcacagcagctgctgaacggcaagaggcaaaccaggtatcggtgt
ggaagtgggaaatcacgaagccagctgaccgtggaggagctgagttcatttgtgaggcag
ctgtacaacctctcctgctgcctccctcaggctccgaagctgaaggtactcttgaaccgt
atcgaagactttcagcagcacagcgagaaagtcctggcagaccaagttccgagcgtcgct
gagatccaaagcctgctggacgtcagctttgaatttgacgtggacctgccggagcttcct
cgcctgagagtgaggctggagcaggctcgctggctggaggcagtgcagcaggccagcgcc
cagcccgccgccctgactctggagaccatgaggaggctcatcgaccagggagtcggcctg
tcaccccatccgtccgtggagaaagccatggctcgtcttcaggagcagctcacggtgtct
gagcactgggaggacaaggcgagcggcctcctcaaagccagaccaccacactccatagag
acccttagtgctgctgcggagaaggcgtctggtctcaccgctcacctcccaaactgtctg
ctcctgaaggacaccatcagaaaggcccgggagtggcttcaagaggctgaggagcttcag
gccactggctgcattctgatggtggacagcctctctgacatggtgctacgaggacacgcc
atccaagtccacctggaacctttggaccaactggagtcgttaatggtagaagtgcaggaa
tggaaagattctgcagcaacaacttttcttcagacagactcggctcttaccttactggag
gttctgtccccaagaattgactttggaaatattggttctccaaagaggaagatcaagaaa
ggcaaagagtcaccgaaaagtaacaaaaagaaaacgccaggtctcaattctctcactgac
gtggaaagagcgctttcagagcacaaggattctacctctgcaatggcaactctggaggag
ctgcaggtgagggagatggaggctttctctaatctcagggcagcaaatgagtcaaagctc
cttcccaccgcagactgcatggacctcaaggtgtgtgtctgtcagaaggcgcccatgggt
gcaatgctgcagtgtgaactctgcagggatgccttccacagtgtgtgtgtcagagacaca
tcggacccctgcaaaacacagccgtggctctgtccgcagtgccagcgagcggaaaaaccc
cccttgaacaaagtcctctccctgcaatcctctctgcggcgcataggggtgcgcctgccg
gagggcgacgctctgcaccatgtggttgagaggacacttaactggcagcatgaagcacaa
cagatttcaaagatgtgtaacctaccggagctggaagaaagaccagcgactccccccact
ctcaccagctgggtgtcaggcagccatgaaactcaagacaacactcaggcgccctccttg
actccagagtggaacaggacaagccatgctcagactgtcttttacaccgagcagagatgt
ataccgctgcagggcttgagtcgggagctggaggagctgatggtggaggggctcctgctg
caggtgtctctgccagaggtgcagagcctctaccacacgttactggaccgagccaccagc
cagcaaacaaacagatgcatgttgcctccacaggacgaggccgcagacgctgacgtgcac
acgcagtttaactctcagggaaaaaatctgccactgaaccaggagggagtcaacgccatg
agggacattatgaccggctcagaaaagaaagtgaagcggcatttggacaacaaaaaacat
tctcacaaaagacagaagataaataagaagaatctgcagcgcagaacggcgtcgacctcg
tcctccccacgctctgatttctcccagtctgacgaatctgatgaggaaatggccgtgtgt
ccagcagagaggtgtcagctgcccgagggagatgaggtgaactgggtccagtgcgacggc
agctgtaaccagtggtttcaccaggtctgcgtcggcgtcacagctgagatggcggagaag
gaggactacatttgtgtcaggtgcacgctgagcgacggacacatgagaaaatga

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