Hippoglossus hippoglossus (Atlantic halibut): 117764330
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Entry
117764330 CDS
T07778
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117764330 (rbm39b)
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
General mRNP proteins
117764330 (rbm39b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
RSRP
Motif
Other DBs
NCBI-GeneID:
117764330
NCBI-ProteinID:
XP_034445903
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Position
7:complement(19331859..19341411)
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AA seq
520 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDEIKSSHANGHDDQNKKKRRSRSRSRSPGSKKRRSRSKDKKKG
KKRSRSRERKRSRSRERHRSGSRSKERSGRYRARKSPIRKRSKSRSPFKKEKSPISNTTS
KFDVAQMRDYQENQKTHRQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRD
VRMISDRNSRRSKGIAYIEFVDSSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANN
LQKGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADA
ECAKKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMA
RLAEGTGLKIPPAAQQALQMTGSIPFGNMSSQQSVPTPASNQALNLPSQPLATHCLQLSN
LFNPQAENDPTWATEIQDDVIEECNKHGGIVHIYVDKNSTQGNVYVKCPSIPAAMATVNA
LHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPTRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccatacagaaaggatgagatc
aagtcctctcatgcaaatggccatgatgaccagaataaaaagaaaaggaggagcagaagt
aggagccggagcccaggctctaagaaaagaagaagcagaagcaaagacaaaaagaagggt
aagaagaggagccggagccgagaaagaaaacgaagccgcagcagagagcgccatcgcagc
ggctcccggagcaaggaacgatctggccgttacagagcacgaaagagccccattcgcaaa
cgttccaaaagtcggagccccttcaaaaaggaaaagagtcccatcagcaataccaccagc
aagtttgatgtagctcagatgcgtgattatcaagaaaatcaaaagactcacaggcaacca
attgacaatctaacacctgaggagcgggatgcacgcacagttttctgtatgcagctcgct
gccagaatcagagctcgggacctggaagactttttctcagctgtcggaaaagtcagagac
gtgagaatgatctcagacagaaactcaaggaggtcaaagggcatcgcatacatcgagttt
gtggactcctcttctgtgcctctggcgatcggactgaccggccagaggcttttaggagtt
cccatcatcgtccaggcctctcaggcagagaaaaacagagctgcagcggctgctaacaat
ttacagaagggcagttcaggtccgatgcggctgtacgtgggctcgctgcatttcaacatc
accgaagaaatgcttcgagggatctttgagccctttggaaagattgagggaatccagctc
atgatggacagtgagactggacgatccaaaggatatggcttcatatcgtttgcagatgca
gaatgtgcaaaaaaggccctggagcagctgaacggcttcgagctggccgggcgtccgatg
aaggtggggcatgtgacggagcgctcagactcctcgacggccagttccttcctggacaac
gacgaactagagaggaccggcatcgacctgggcaccaccgggcgtttacagctaatggct
cgactagcagaaggaactggtctgaagatcccccccgctgctcagcaggctctgcagatg
actgggtccataccgtttggaaacatgtcttctcaacaatctgtcccaactccagcttca
aaccaagccttgaacctcccatcacagccgctggccacacactgcctccagctgtccaac
ctgttcaacccacaagcggaaaacgatcccacctgggccactgagatccaagacgatgtg
atcgaggagtgcaacaaacacggaggaatagttcacatttatgtggataagaactcaact
caaggtaatgtgtatgtgaagtgtccctcgataccagcagcgatggcaactgtaaatgca
cttcatggacgctggtttgcaggcaaaatgataacagctgcctacgttcccttacccacc
taccacaaccttttccctgattccgtaacggcgaagcagcttcttatgccgacacgtcga
tag
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