Hippoglossus hippoglossus (Atlantic halibut): 117764347
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Entry
117764347 CDS
T07778
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04020
Calcium signaling pathway
hhip04148
Efferocytosis
hhip04218
Cellular senescence
hhip04310
Wnt signaling pathway
hhip04370
VEGF signaling pathway
hhip04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117764347 (nfatc2a)
04370 VEGF signaling pathway
117764347 (nfatc2a)
04020 Calcium signaling pathway
117764347 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117764347 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
117764347 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117764347 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117764347 (nfatc2a)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117764347 (nfatc2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
117764347
NCBI-ProteinID:
XP_034445936
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All DBs
Position
7:25559198..25576017
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AA seq
899 aa
AA seq
DB search
MSSFYDEKDLEEELSRVHYPDDDLEFEYLFEYEPPGSDFAGGHADDPNLASHKVLSPESE
QAFPLEEASPYGIKSCSPPYGGHHTEVLSGYDNQEARNYLDSTRPAGLALSPRIEITPSR
EHYNHGRDSLQNHHLNISPRPTLTVPGHENLAYREPLCLSPASSNSSASWHSENYSPWTS
PCVSPGSGQNPGDLCPRLQNIHTGSPRTSPGTSPRTSLVEDGLGQRSPSSRPGSRSTSPQ
GKRTYDMYRNPGLVPGHRSRSPSPHSGHEDHNISAHYTHSSLVDAMNGFGQPGLVPTKIV
KTSNQVYALYPENHLEGNFLVSCDQDIKKPAAEPFFVIPPIWSKPLVSSICSIPVASLPP
LEWPMPRRTDQYELHIDVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHGYRGKEPLAL
QIFIGTADDRILKPHAFYQVHRITGKTVTTTSFEKIINGTKVLEIPLEPKNNMKAIIDCA
GILKLRNADIELRKGETDVGRKNTRVRLVFRVHIPQPGGQHVSLQVASHPIECSQRSAHE
LPMVEKQDMDSCSVLGGQQMILTGQNFSSDSKVIFTEKTQDGQQIWEMEATVDKDKSQPS
MLFVELPSYRDTSACHSVKVNFYVINGKRKRSQPQHFTFTPLASPSIKTEPLDEYEVDHM
GFAVPQILGLSPHPYYHTPRGVLHPDNGLVSSMASCQRLSSSLPSQDARFQQQSPAIVYS
RGGKSLSGSQTLYQQTGGMMPDPHRSVLVHTGSPAQSVGPIGAGQHPSIIQFSPTNHHLL
RGGDPQPLSAPQPDSQQIIYCDGYSPRSASDHSPTPPQAQADATHPQHYPTVIQQQPYMQ
KAPQKIRAPPGAGEMEAPGDGQRRVTVKEENLDQAYLDDGELNEIIRKDLTGVQARGQT
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagctccttttacgacgagaaagacctggaggaagagctcagtcgagtccactacccc
gatgacgacctggagtttgagtacttgtttgaatatgagccgcccggcagcgacttcgct
ggaggacatgcagatgaccccaaccttgcatcccacaaagtcctcagcccggagtcggag
caggcgttccccctggaggaggcctccccgtacggcatcaagtcctgcagccccccctac
ggcgggcaccacactgaggttctctcaggttatgacaaccaggaggccagaaactacctg
gacagtacccggcccgcaggcctggcgctgagcccgcggattgaaatcacaccctcccgt
gagcactacaaccatggtcgggactccctgcagaaccaccacctgaacattagccccaga
cccaccctgaccgtccccggccatgagaacctcgcctaccgcgagcccctgtgcctgagt
cccgccagcagcaactcctccgccagctggcattcggagaactactccccctggacgtcc
ccttgtgtgtcccctggcagcggccagaaccccggagacctctgcccccgattgcagaac
atccacactggctccccacgcacctccccgggcacctctcctcgcaccagcctagtcgag
gacggcctgggacagcgctcgccctcctccagacctggctcccgctccacctccccacag
ggcaaacgcacctacgacatgtacaggaatccaggcctggtccctggacatcgctcccgc
agtccctccccccacagcggccatgaagatcacaacatcagtgcccactacacacacagc
agcctcgtcgatgccatgaacggcttcggtcagccaggcctggtgcccactaagatagtc
aagacgtccaaccaggtgtacgccctgtacccagagaaccacctggaagggaacttcttg
gtttcctgtgaccaggacataaagaaacctgctgcagagcctttctttgtcatcccccca
atctggtccaagccgctggtttccagcatctgcagcatccctgtggcctccctccctccg
ctggaatggccgatgcccagacgcaccgaccagtatgagctgcacatcgacgtgcagccc
aagccgcaccacagagcccactacgagacggagggaagccggggggcggtgaaggccccg
acaggaggacatccggttgtgcagcttcatggttacagagggaaggagcctctcgccctg
cagatcttcatcggcacagcggacgatcgcatcctcaagcctcacgccttttaccaagtt
caccgcatcaccggcaagactgtgacgaccacgagctttgagaagattatcaacggcacc
aaagtcctggagatccccctggagccaaagaacaacatgaaagcaataatcgactgtgcc
gggatcctgaagctccggaacgccgacatcgagctgaggaagggcgagacggacgtgggc
cggaaaaacacccgagtccgtcttgtgttccgtgtgcacatacctcagcccggaggacag
cacgtctccctgcaagtggcctcgcatcccattgagtgctctcagcgttcagcgcacgag
cttcccatggtggagaagcaggacatggacagctgctccgtgctcggcggccagcagatg
atcctgactgggcagaacttcagctccgattccaaggtcatttttacggagaagactcag
gatgggcagcaaatttgggaaatggaagcaacagtggacaaagataaaagccagcctagc
atgctgtttgtggagctgccgtcgtaccgggacacgtccgcctgccactcggtcaaagtg
aacttctacgtcatcaacggcaagaggaagcgcagccagcctcagcacttcaccttcact
cctctggcctctccatccatcaagacagagcctctagatgagtatgaagtcgaccacatg
ggcttcgccgtgcctcagatcttgggcctgtcccctcatccctactaccacacccctcgt
ggcgtcctccacccggacaacgggctggtgtccagcatggcctcctgccagcgcctcagc
tccagcctccccagccaggacgctcgtttccagcagcagagcccggccatcgtctactcc
cgcgggggcaagagtctcagcggcagccagactctttatcagcagaccggagggatgatg
cccgacccgcaccggtccgtcctggtccacaccggctccccggctcagtctgtaggtccc
atcggtgcaggccagcacccctccatcatccagttttcccccaccaaccaccacctgctc
cgggggggagaccctcagcctctcagcgctccgcagcccgactcccagcagatcatctac
tgcgacggctactcccctcggtcggccagcgaccactcacccacacccccccaggctcag
gccgacgccacccaccctcagcactatcccaccgtcatccagcagcagccctacatgcag
aaggcgccgcagaaaatccgggctccccccggcgccggggagatggaggctccgggcgac
ggccagaggagggtgacggtcaaagaggagaacctggaccaggcctacctagatgatggt
gagttgaacgagatcataaggaaggatctgacgggcgttcaggccagagggcagacatag
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