Hippoglossus hippoglossus (Atlantic halibut): 117764432
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Entry
117764432 CDS
T07778
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03266
Virion - Herpesvirus
hhip04145
Phagosome
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
hhip04517
IgSF CAM signaling
hhip04518
Integrin signaling
hhip04810
Regulation of actin cytoskeleton
hhip04820
Cytoskeleton in muscle cells
hhip05100
Bacterial invasion of epithelial cells
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117764432 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117764432 (itga5)
04517 IgSF CAM signaling
117764432 (itga5)
04518 Integrin signaling
117764432 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117764432 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117764432 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117764432 (itga5)
04810 Regulation of actin cytoskeleton
117764432 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117764432 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117764432 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117764432 (itga5)
04515 Cell adhesion molecules [BR:
hhip04515
]
117764432 (itga5)
04090 CD molecules [BR:
hhip04090
]
117764432 (itga5)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117764432 (itga5)
Cell adhesion molecules [BR:
hhip04515
]
Integrins
Integrin alpha subunits
117764432 (itga5)
CD molecules [BR:
hhip04090
]
Proteins
117764432 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
117764432
NCBI-ProteinID:
XP_034446092
LinkDB
All DBs
Position
7:24028279..24060547
Genome browser
AA seq
1057 aa
AA seq
DB search
MGLERFCAKTPRMAARLSRSLLCIVGLSLTLSVCDAFNLDVENPAVYSGAPGSYFGYAVD
FYLADSSSASVVIGAPKANTRQVNVTEGGSVFYCPWILNQTDCHTIDFDTKGDRTISLQD
TEQQVDFKSHQWFGATVRSHGDTILACAPLYSWRTEKDTPHSDATGTCYLSVHNFTKFVE
YAPCRTEISEAGGQGYCQGGFSADFTKDGKVVLGGPGSYFWQGQVISAAKEDIIKAYYPG
YFMQSVKGQIQTKQVQVQHDDSYQGYSVAVGEFSGDQVEDFVAGVPKGLMLYGLVCILNG
TDLKAMINYTGEQMGSYFGYAVATTDINSDGMADLLVGAPMFMVRGSDGRLEEMGRVYVY
LQRGPLSLELQLPHLTGTEAFGRFGSTIAPLGDLNQDGFNDVAISCPFGGDDRRGLVYIF
NGYSEGLREKPSQVITGQWAAGMIPASFGFALRGAKDLDMNGYPDLIVGAFGVDKAVLYR
SRPIVNTSASLTVYPTMINPEEKNCIVTSGNTSVPVSCVNLSFCISADGKHLPDVLDFQV
EVQLDSHKHKQKGAVKRALFLDSQLPTLQRSVRVRHGERVCNHTKIYLRDDKDFRDKLSS
IYVAVNFSLDPSAAADSRGLRPILNYQTTNVIEQKAQILLDCGEDNICVPDLKLSVQGDR
KEVYLGDDNSLTLTFNAKNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYETE
NQTRYLSCDLGNPMKSATSLWAGLRFTVPRLKDTHKNVQFELQIRSKNENNSHSEVVPYK
LEVVVQAEVILQGVSRPDKVFFPPANWKVTKNYGAEQDVGPAMEHVYELVNNGPSRISHT
LLELRCPLSVQGHNLLYPLEFSTKGNINCTADKNMNHLHLKLQRTSTETPILALKAPEHR
VERRDVHRNQLAHLTNLSCSNVECWSLQCKVGLLEKGTTAIVNVRSRVWAETFMERPYKQ
YVLECLARYSVEKMPYAILPKHAPSGHKKVVTPIVWNKPDIENSVPLWIIILAILAGLLL
LALLIYVLYKFGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgggattggaacggttttgcgcaaagacgccgaggatggcggcgcgtctctcccgctcg
ctcctttgtatcgtcgggctctcgctcactctctctgtctgcgacgcgttcaacttggac
gtggagaatccagctgtttacagcggtgctccagggagctacttcggatatgctgtggac
ttttatttggccgattcctccagtgcaagcgtggtgataggagctcccaaggccaacacg
aggcaggtcaatgtgacagaaggaggatctgtattctactgtccatggatcctcaaccaa
acagattgtcacaccattgactttgacacgaaaggggatcgcactatttcactccaggac
acagagcaacaggttgatttcaagtcccaccaatggttcggcgccaccgtgcgttcccac
ggtgacacaatcctggcttgtgcccctctctactcttggcggactgaaaaagacaccccc
cactctgacgctacaggaacctgctacctctcggtccataatttcaccaaattcgtggag
tacgctccctgtcgcacagagatcagtgaagctgggggacaagggtactgtcagggagga
ttcagcgccgacttcacaaaggatggcaaagtggtgttgggcgggccgggcagctacttc
tggcaaggtcaggtgatttctgcagccaaggaggacattatcaaagcgtactacccaggt
tatttcatgcagtctgtgaagggccagatccagaccaaacaggtccaggtccagcatgac
gacagctaccagggctactctgttgctgttggggaattcagtggcgatcaagtggaagat
tttgtggccggtgttccaaaaggactcatgctttatggtttggtgtgtattctgaatggt
acagatctgaaggccatgattaactacactggcgagcagatggggtcatatttcggctac
gcagtggcaacgactgacatcaacagcgacgggatggccgacctgctggtgggagctccc
atgttcatggtgcggggctctgacggccgcctggaggagatgggccgggtctatgtttac
ctgcagcgtgggcccctgagcctggagctacagctgccgcacctcactggcaccgaggcg
tttgggagattcggcagcaccattgcaccactgggagacctgaaccaggatggtttcaat
gacgtggccattagctgtccgttcggaggggacgaccggcggggactggtctacatcttt
aacggatactcagaaggactcagggaaaagccatctcaggtgatcaccggccagtgggct
gctggaatgattcccgccagctttggattcgctctcagaggtgctaaggacctggacatg
aatggataccctgatctcatcgttggagcttttggtgtcgataaagcagttctctataga
tctcgccccatagtgaacaccagtgcctctctgaccgtttaccccaccatgatcaaccct
gaggagaagaactgcattgtcaccagcggaaacaccagcgtccctgtttcctgtgtcaac
ctgagtttctgcatatcggcagatgggaagcaccttccagacgttctagatttccaggtg
gaggtgcagctcgacagtcataagcacaagcagaaaggtgccgtgaagagggctctgttc
ttggactcccagctgcccacgctccagagaagtgtgagggttcgccacggcgagcgtgtc
tgcaaccacacaaagatctacctaagggatgataaggacttcagggataagctctcctcc
atctatgtggccgtgaacttcagcttggatccgagcgctgcggccgactcccgcggcctg
cgtcccatcctcaactatcagaccaccaacgtaatcgagcagaaggctcagattctgttg
gactgcggagaggacaatatctgtgttcctgacttgaagctgtcagttcaaggggacagg
aaggaagtctacctgggtgacgacaactcgctgaccttgacctttaacgccaagaacgag
ggcgagggaggcgcttacgaagccgagctgtacgtggtgctgcctcctgaagctgactac
agcggaattgctcgcaataatgagagcctgacgcagctcacctgcagctacgagactgag
aaccagactcgatacctcagctgcgatttgggaaacccgatgaagtctgctaccagtctg
tgggcgggtctgcgcttcacggtgccacggctgaaggacacgcacaaaaacgtgcagttc
gagctgcagatccgcagtaaaaatgagaataattcccacagtgaggttgtaccctacaag
ctggaggtggtcgtccaagctgaggtcattctgcagggcgtgtctcgaccagataaggtc
ttcttcccgccggccaactggaaggtgaccaaaaactacggggcggagcaggacgtgggg
cccgcgatggaacatgtctatgagttggtgaacaacgggcccagtcggatcagccacacc
cttctggagctgcgctgccccctcagtgtccagggccacaatctcctctacccgctggag
ttctccactaaaggaaacatcaactgcaccgccgacaagaacatgaaccacctacacctc
aaactccagcgcacgtccacagaaactccgatcctggctctgaaggccccggagcaccgc
gtggagaggagggacgtccacaggaatcagctcgctcatttgaccaacctgtcgtgctct
aatgtggagtgctggtcgctccagtgcaaagtgggtctcctggagaaagggaccactgcg
atcgtcaatgtgcgatcccgcgtctgggccgagaccttcatggagaggccctacaagcag
tatgtgctggagtgcctggccaggtacagtgtggagaagatgccttacgccatcctcccc
aaacatgcacccagcggacacaaaaaggtggtgacccccatcgtgtggaacaagccagac
atcgagaactcagttcctctgtggatcatcatcttggccattctggctggtttgctgctt
ctggcgttactcatctacgttctttacaagtttggcttctttaagcgatctctaccttac
ggcaccgccatggagaaagcacagctgaaaccgcaggctgcctccgaggcctag
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