Hippoglossus hippoglossus (Atlantic halibut): 117764435
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Entry
117764435 CDS
T07778
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117764435 (nphp4)
Cilium and associated proteins [BR:
hhip03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117764435 (nphp4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
117764435
NCBI-ProteinID:
XP_034446098
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Position
7:complement(8896295..9056037)
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AA seq
1456 aa
AA seq
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MVQTEDTSTMADGWREVFERSRLVPPSSHTVRLAAESHLAQSHGFQLSLSRLTAAQPPQS
LEMPETEQDLTYQLRATLFDQNHQHFFGRTWKSPTQKMKNSKISFNEVLYFHTSLRLPST
VVVVELVSLSPRPDSSQQALGRGFTVLELFTNRPEAQAADGNRRLNLHHGSPRILLHPQL
QDTTDYRSLLKTIDGTHLDCVVKKHPALVSMMHLLPENVLVSGDENIPGLSASPTGDALL
RPQLLKTLPFTLNRLTISLQPSLEKFESQLLQLINADCHNTKQPGPEGTQRAVVIQERRL
HVGVHNGWCFLDKPQVVVLEPLASGGRGRADSTSKQSTLDSSAPSPLPQILGLRSSLELK
MTNHQAMSIVFQLEHVFSAPIGRETMLSATSTSRAAFLQCLRWGIFFPFQQPADWRGEEI
QLVLQGGAKSNPYGVMVYSTEMSAKTQSSVPLSAPGTAQLKDTLTFRLSSGLERKASSPK
ASLRSKQEDVSHERRLPSSPSQGQKLIAAASPPESPQGPKLSLSQLAATSRYPTISHSSS
ALPWQQSFPSLLHPSPLASAHQLSHVACSAVSNIAHLEMDLQREGDVSASAHSEGDQLEE
LPFTPVHAPVITLGMNVPSSSSVSSRSSLAHLYSAGFPEIADYSGQVAEVLDPTEPVPFD
PQREEADLLQGNLLVFQFLAFTRIPTPGVGPDWPDNIHFTFQFYRFPPVTSQKLKLLKSD
KVQQKRCDPLPCVVASINRDGTVNTGSPGLQVQFRVDDGFLRPGEKRWFLRYLALHTMHI
DIWDSDSLLLIGSTAIELKYMLRQGKSAVQALHEVEVLTTDYVGDDALLMSASQGQHSAS
SPMTIRTIVRGRLHIRTGNIGCPVDPTRRRAGDVMLSPSHIITPRQVTSGFRGGSLSSRN
ILQLNARNTAQAHRLEMDGDHVPLYRHRIRPDSVVPGELNLNEPNGGRRKLDCMAAVRQR
EAKEGVRATNVTEQTSEAHLSAELLQIQLSEERSRSEGIANMLGQAITTQHLLYASLGST
EYMEFVLKNPFNVPQTVTIHSDDPDLSVITNTDEWRYFKALTQTPTPLEENMFQWEQGAP
GPRVYLRPKESIHIPLKYQSFLCDHTMAPQGPSFLPTGKGSQMAKKNQSNIVAAKTIKVT
FQADDGKPMAICQVNVEPTPHVVNQTFRLYHPELCFLKKAIRLPPWHDPTVEDPDARSNI
SVRCSDPNIICQTRMLVPGEPQDVYLKVPGNPSPHIKMFFVMVFTDKWMAAPSQTWQIYV
HFLERVDVSCVTGQRTCQSLVLRGRQTVRKVKCFSSHPKEIQVDPEGVFVLPPSAVQELQ
LKVQLWRAGSRFLYVNAVDMENQRLITAWLLCLNVHQPVLSKAFEVCVPVGGGRGSSKKI
TYTNPYTSGRTFLLRSDHPDLLQFKEDKFQVSGGESYTIGLRFASSQSPGSVKIHVYVNN
LEEKTEETFVVNVNYS
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaaccgaagacacgtccaccatggcggacggctggagagaagtgttcgagaga
agccgcctggttcctccgtccagccacacggtccgcctggctgcggagagccacctcgcc
cagtcccacggcttccagctcagcctcagccggctcactgcagctcagcccccgcagtca
ctagagatgccagagacggaacaagacctgacctaccagctgcgggcgaccctgtttgat
caaaaccaccagcacttctttgggaggacatggaagagtccaacccagaagatgaaaaac
agcaagatctccttcaatgaggtcctttacttccatacgtctctgcggttgcccagcaca
gtggtggttgtggagctggtgtcgttgtcacccagaccagacagttcccagcaggccctg
ggcagaggcttcactgtgctggagctttttaccaacaggccagaggctcaggctgctgat
ggcaacagaaggctgaatctacaccatgggtcaccaagaatcctcctacatccccaattg
caggacacaactgactaccgcagtctcttgaagactatagatggcacacatttggactgt
gtggtaaaaaaacaccctgcattggtttccatgatgcacctccttccagagaatgtcctt
gtatccggagatgagaacattcctgggctctcagcttctccaacaggagatgctctgctg
aggcctcagctgctcaagacgctgcccttcaccctgaacagactgaccatctccctccag
ccgtccctggagaagtttgagagccagctgctgcagctgatcaatgctgactgccacaac
acaaaacagcctggacccgaagggacacagagggcagttgtcatccaggaaaggaggctc
catgtcggtgtccacaacggctggtgtttcctcgacaagccccaagtggtggtgctggag
cccctggcctcaggaggcagagggcgagcagacagcacctccaaacaaagcaccctagac
agctctgcaccctcaccactccctcagattcttggccttcgcagcagcctggagctcaag
atgaccaatcatcaggccatgtcaattgtcttccagctggagcatgtcttctctgctccg
attgggcgcgagactatgctgtctgccacttccacatcccgagcagccttcttgcagtgc
cttcgttgggggattttttttcccttccagcagccagctgactggaggggggaagagata
cagcttgttctgcaaggaggtgcaaagtcaaacccttacggagtcatggtctacagcaca
gagatgtctgccaagactcagagctcggtgccactctcagctccaggcacagctcagctg
aaagataccttaacttttcggctgtcgtctggtctggaaaggaaggcatccagcccgaag
gcatctctgaggtcgaagcaggaagacgtgtcacatgagaggaggttaccctcatcaccc
tcacaaggtcaaaaactcattgcagcagcttctccaccagagtctcctcaaggcccaaag
ctctcactgtctcagctggcagctacatcgcgctacccgaccatcagccactccagctcg
gcgttgccgtggcaacagtcgtttccttctctgctccatccttccccgttggcatcagcc
caccagctgtcacatgtcgcctgctcagctgtcagcaacattgcccacctggagatggac
cttcagcgtgagggagatgtgtcagcttcagctcacagcgaaggagaccaacttgaggag
ctgccttttacccctgtccacgcccctgtcatcactctggggatgaatgtgcccagttcc
tcctcagtcagctccaggagctccctcgcccacctctactccgctggcttcccggagatt
gcggactacagcgggcaggtggcagaagtcctggaccccacagagccggtgccctttgac
ccccagcgtgaagaggctgaccttctacaaggaaacctgctggtgtttcagtttctggcg
tttaccaggataccaacgccgggtgttggtcctgattggccggacaacatccacttcacc
ttccagttctatcgcttcccaccagtgacatcgcagaagctcaaactgctgaaaagtgac
aaggttcaacaaaaacgttgcgatccacttccctgtgtcgtggcctccatcaacagagat
ggaactgtcaacactggctctccaggtctgcaggtgcagttcagagtagatgatggtttc
ctgaggccaggagagaagcgctggttccttcgctacctggcccttcacaccatgcacatc
gacatctgggacagcgactcactgctcctcataggatctactgccatcgagcttaagtat
atgttgcgccagggtaagtcagcggtgcaggcgcttcacgaggtggaggtgctgaccaca
gattatgtgggagatgacgccctgctgatgagtgcgagtcagggccaacactcagcctcc
agccccatgaccatccgcaccattgtcaggggccgtctgcacatacgcacaggcaacatc
gggtgtccagtagatcccaccaggaggagggcaggggacgtgatgctgtctccttcccac
atcatcacacctcgccaagtcaccagtggcttcaggggagggagcctgtcgtccagaaac
atcctccaactcaacgcgaggaacaccgcacaggctcacagactggagatggacggggat
cacgtgccgttgtacagacacaggatcagacctgacagcgtcgtgccaggggagctcaac
ctaaacgagcccaacggtgggcgccgcaagttggactgcatggccgccgtgcgtcagcga
gaggccaaggaaggtgtacgagcaactaatgtcacggagcagacctcggaagcccacctg
tccgcggaacttcttcagatccaactcagcgaagagcgcagcaggtcagagggcatcgcc
aacatgctgggccaggccattaccacccagcacctcctctatgccagcctgggctccact
gagtacatggagtttgtccttaaaaatccttttaatgtacctcagaccgtcaccatccac
agtgatgaccctgatctcagtgtcatcaccaacacagatgagtggcgatacttcaaagca
ctaacccaaactcccactccgctggaggagaacatgttccagtgggagcagggtgctccg
ggtccgagggtttacctccggcccaaggagagcatccatattcccctgaagtaccagagc
ttcctctgtgatcacaccatggcccctcagggaccgagcttcttacctacaggcaaaggc
tctcagatggccaagaagaatcagtccaacattgttgctgccaaaactatcaaggttact
ttccaagcagacgacggcaaaccgatggccatctgccaggtgaacgtggagccgacgccc
cacgttgtcaaccagacattccgactctaccaccctgagctctgtttcctgaagaaggcc
atccgcctgcctccctggcacgaccccacagtcgaggacccagatgccagaagcaacatt
tccgttcgctgcagtgaccctaacatcatctgccagacgaggatgctggtgccaggggag
cctcaggatgtgtacttgaaagtgccagggaatcccagtcctcacataaaaatgttcttt
gtgatggttttcactgataagtggatggcggcgccctcgcagacctggcagatttacgta
catttcttggagcgggtggatgttagctgtgtgactggccagcggacctgtcaatcacta
gtgctgaggggaagacagactgttcgcaaggtcaaatgcttctcatcacaccccaaggag
atccaggtggatccagagggtgtattcgttctgccgccctcagcggtgcaggagctccag
ctgaaggtgcagctgtggcgggccggcagccgcttcctgtacgtgaacgctgtggacatg
gagaaccagcgtctgatcactgcctggctgctctgtctcaatgtccatcagcctgtgctg
tcaaaggcatttgaagtgtgtgtcccggttggtggagggcgtggcagctccaaaaaaatc
acctacaccaacccgtacaccagcggccgcacgttcctgctccgctcggaccatccggac
ctgctccagttcaaagaggataaattccaggtcagtggaggagagagttacaccatcgga
ctgagatttgcttccagccagagtcctggctcagtgaagatccatgtctacgtgaacaac
ctggaggagaagacggaggagacgttcgttgtgaatgtcaactactcgtga
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