Hippoglossus hippoglossus (Atlantic halibut): 117764540
Help
Entry
117764540 CDS
T07778
Symbol
zgc:193690
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
hhip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117764540 (zgc:193690)
03015 mRNA surveillance pathway
117764540 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117764540 (zgc:193690)
Enzymes [BR:
hhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117764540 (zgc:193690)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117764540 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117764540
NCBI-ProteinID:
XP_034446295
LinkDB
All DBs
Position
7:24833104..24838520
Genome browser
AA seq
482 aa
AA seq
DB search
MSEDSWALSVDVQEATAPSAQFDISKKMSRTRSSLNTRGDINGNVVRGDGEHGDEPGPAD
QSLLHKMIRRSLVRNRNEVEVLQRDPNSPLYSVKSFEDLRLKPELLNGVYSMGFNRPSRI
QENALPMMLAQPPQNLIXQSQSGTGKTAAFSLAMLSHVNPANKWTQCLCISPTYELALQI
GQVIEQMGKFCPDVELAYAIRGNRMERGTKLQQQIVIGTPGTVLDWCIKYKFIDPKKISM
FVLDEADVMIATQGHRDQSFRIHRQLTKDCQMLLFSATFEDSVWGFAKQVIPDPNIIRLK
REEETLDTIKQYYVVCKEEEDKFTALCNLYGGLTVAQAIIFCRTRKTAAWLSVNLIKEGH
QVALLSGELTVEQRAAVIERYRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPVDIDGNA
DNETYLHRIGRTGRFGKRGFAVNMVDSEHGMDILNQIEIHFNRRIPKLDPSDPTAMEKEF
NR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggactcgtgggcgctgtcggtggacgtgcaggaggcgacggctccatcggct
cagtttgacatttcaaagaaaatgtctcgaacgaggagttccctgaacacgagaggagac
ataaacggcaacgttgtgcggggggacggcgaacatggagacgagccgggcccggccgat
cagtcgctgctgcacaagatgatccgtcgctctctggtgcggaacaggaacgaggtggag
gtcctgcagagggaccccaactcgcctctctactccgtcaagtcgtttgaggacctgagg
ctgaaacctgagctgctgaacggtgtgtacagcatgggcttcaacagaccctccagaatc
caggagaacgctttgcccatgatgctggcacaaccacctcagaatctaatcngccagtca
cagtccggcacaggtaaaactgctgctttctctctggccatgctcagccatgtaaaccca
gccaataagtggactcagtgcctgtgcatctcaccaacgtatgagctcgctctgcagatc
ggtcaggtcatcgagcaaatggggaagttttgtccagatgtggaactggcgtacgccatt
cgaggcaacagaatggagcgaggcactaagttgcagcagcagattgtcattggaacaccg
ggcacggtcctggactggtgcatcaagtacaagttcatcgaccccaagaagatcagcatg
tttgtgctggacgaggctgacgtgatgatcgccacgcagggtcatcgggatcagagcttt
cgaattcataggcagctgacaaaggattgccaaatgctccttttctccgcgaccttcgag
gactccgtgtggggttttgccaaacaggtgattcccgacccaaatatcatcaggctgaag
cgcgaagaggagacgctggacaccatcaagcagtactatgtggtctgcaaggaggaagag
gacaagttcacagcgctctgcaatctttacggaggcctcaccgttgcacaggccattatc
ttctgccgtacccgtaaaacggcagcttggttatctgtaaacctgatcaaagagggccat
caggtggcgctgctgagtggagaattgacggtggagcagagagccgcggtcattgaacgc
tatcgcaacggcaaggagaaggtgctcgtgaccacgaatgtgtgctccagaggtatcgat
gttgagcaggtgtcacttgtggtaaactttgacctccctgtggacattgatggaaatgcc
gacaacgagacatacctgcaccggatcggccgcacgggacgcttcggcaaaagaggattt
gctgtcaatatggttgacagtgaacacggcatggatatcctcaaccaaatcgagattcat
ttcaacaggagaatcccaaaactggacccaagtgatccgacagcgatggagaaagagttc
aaccgttag
DBGET
integrated database retrieval system
