Hippoglossus hippoglossus (Atlantic halibut): 117764553
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Entry
117764553 CDS
T07778
Symbol
srsf6a
Name
(RefSeq) serine and arginine rich splicing factor 6a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117764553 (srsf6a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117764553 (srsf6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117764553 (srsf6a)
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
SR proteins
117764553 (srsf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117764553
NCBI-ProteinID:
XP_034446318
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All DBs
Position
7:complement(10828708..10833641)
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AA seq
394 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFSGYGKLMEVDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGQSGGYGGGGGGGGGGGGGGGGGGGSGGRSSSGYSSRTHTGR
EKYGPPVRTEYRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSQSDM
KRALDKLDGTDINGRKIRLVEERPRKRRSCSGSRSRSRSRRRSRSRSRRSHRSRSSRSRS
RSHSRSRSPSNKRNQSDSRSGRKSRSKSGESKSHSRNRRSHSRSRKSKSHSRSGKSRSHS
ADRKSKSRSKSRSKAKSERESRSRSKEMPVDKKSRSRSASPVENGKEERAAKSASRSPSP
REDDRRSKSMEKRSVSRSKSRSRSRSRSRSASQD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggtgtacatcgggcgactgagctataatgtccgcgaaaaagacatccagcga
tttttcagcggatatgggaaactcatggaagtcgatctaaagaacggctatggattcgtg
gagtttgaagataaccgggacgccgacgatgccgtgtatgagctgaacgggaaggagctg
tgcggggagcgggtgatcgtggaacatgcccgcgggccgcggcgagaccgagatggccag
agtgggggttacggaggcggcggaggaggaggaggcggcggcggtggtggtggtggtggc
ggcggcggaagtggtgggcgcagtagtagtggttacagcagccggacccacactggcagg
gagaagtatggacccccagtccgtactgagtaccgtctcgtcgtggagaacttgtctagc
cgctgcagttggcaagacctaaaggacttcatgcgccaggcgggggaagtgacctacgca
gacgcccacaaagagcgcaccaatgagggagtgatcgagttccgctctcaatcggacatg
aagagggcactggacaagctggacggaacagacatcaacgggcggaagattcgtcttgtg
gaggaacgaccccgtaaacgaagatcctgctctggcagtcgctccagatctcgcagtcgc
cgccgctcccgtagtaggagccgcagaagccacaggagcaggagctccaggagtcgctcc
agatcccactcaaggtctcgttcccctagcaacaagaggaatcaatccgactccagatct
ggaaggaagtctcgctccaagtcaggagaaagcaaatcacattctcgcaatcgcaggtca
cactctcgttcccgcaaatccaaatctcattcacgctccggcaagtcccgctcccattca
gctgaccggaaatccaagtctcgttctaagagccgttccaaggcaaagtcagagcgtgaa
tctcgcagtcgctcaaaggagatgcccgttgacaagaagtcacgcagtcgatcagcttcc
ccggtagagaacgggaaggaggagcgtgctgccaaatctgcctcccgctccccatccccc
cgggaggatgaccgccgatccaagtctatggagaagcgctcagtctcccgctcaaagtcc
cgctcaagatctcgctcacgatctagatcagcttctcaagattag
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