Hippoglossus hippoglossus (Atlantic halibut): 117764634
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Entry
117764634 CDS
T07778
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117764634 (rprd1b)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117764634 (rprd1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
DUF5076
pre-PUA_NIP7
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
117764634
NCBI-ProteinID:
XP_034446464
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Position
7:complement(11110605..11117073)
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AA seq
330 aa
AA seq
DB search
MSSFSESALEKKLTELSSSQQSVQTLSLWIIHHRKHSALIVKVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFAKDYETVLVDACSHVASEADVGCKKHMERLLNIWKERALYRAD
FIQQLKLAIEDSNSPRPSAEEQKKPVKRSYQKIHEEEDDEDDDYRSHNSPRSTDASATLL
TEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADKLSKTVDEACLL
LAEYNGRLAAELEDRRQLARMLAEYIGSQKEALMEREKKLEEYKQKLARVTQVRKELKSH
IQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccttctccgagtcggccctggagaagaagctgacggagctgagcagctcgcag
cagagcgtccagactctgtctctgtggatcatccaccaccgcaaacactcagccctcatc
gtcaaagtgtggcacagagagctgaagaaagctaaaagctccaggaagctgactttcctc
tatctggccaacgatgtcatccagaacagcaagaaaaaaggaccagaattcgccaaagac
tatgagaccgtcctcgtcgatgcctgctcccatgttgccagtgaagcagatgtcggctgt
aaaaagcacatggagcgactgctgaatatctggaaggagagagccctgtacagagccgac
ttcattcagcagctcaaactggccatagaagactcaaacagccccaggccttcagcagag
gagcagaagaagcctgtgaaaagaagctaccaaaagatccatgaagaagaagatgacgag
gatgacgactacagaagccacaactctcccagaagcacagatgcctccgcaactctgctg
acagaggagctggtgaaggccctgcaggacttagagaatgctgcatcaggcgacgcagct
gttcgtcagaagatcgcctcgctgccacaggaagtccaggatgtttcactgctggagaag
atcactgacaaggaggcagcagacaagctgtcgaagacggtggacgaagcctgtttgcta
ctggctgagtacaacggccgactggctgcagagctagaggaccgcaggcagctggcacgc
atgctggccgaatacatcggcagccagaaggaggcgctcatggagagagagaagaaacta
gaggaatacaagcagaaactggcgagagtgacccaggtgaggaaagagcttaagtcccac
atccagagtctccccgacctctctctcctgcccaatgtgactgggggtctggccccgctc
ccctcggctggagacctcttctccaccgactga
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