Hippoglossus hippoglossus (Atlantic halibut): 117764838
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Entry
117764838 CDS
T07778
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117764838 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117764838 (xpc)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117764838 (xpc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
117764838
NCBI-ProteinID:
XP_034446808
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All DBs
Position
7:9869652..9880094
Genome browser
AA seq
924 aa
AA seq
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MAKRRASVGTQVNTKKPRKVLPAKSRTAKAARAKKREADNGITEEEEKLERKIKPKSRLS
SKLVAKSISPSKCTTSTTTDVNTSKYFQSPVKEEETDSEDFDMVTSRAPVVTVNAKKSQK
EEEQDSEEDEDDWEEVEELDEPLGPAEALEPILPSQPVEIEIETPEVRKKKKIQAEFESY
LRRMMNKCKKDLLIDTHKVHLMCLIASGMFRNRLCSEPDLLAITLSLLPAHYGNVMKERI
DQNYLSGLLKWFRATFTLNPSLSCEERPDPRAILERRLASLSARNHQEMTQLFLLVLRSL
QLFCRLVLSLQPIPLKPPSAKGKGARTSPGASGKSSSNQETSKTTSLQLKVSPGTKRPAA
VGKVKGDRGGKKAKRKEKTENEERVITSGGQRPKNSKRRTIASKVSYKEESQSEDEEVLS
DEDEFKASSEEDSEDSESEAKSSKGKGRKVINNKNTAGSGGGKKLVKGEGDKEGEEEEDN
DEEGEGKTNNGTKRRSGKKTKGPGADEWMEVYLEKTSSWVCVDVEQGVGMPQLCSQNATS
PVTYVVSVDGDGFLKDLGRKYDPTWMTSSRKRRVDEDWWDETLEPFLGPEYERDKREDKE
LQNKLMNKPLPISIAEYKNHPLYALKRHMLKYEAIYPSTATELGYCRGEPVYSRDCVHTL
HSKDTWLKEARTVRIGEEPYKMVRGFSNRSRKARIMSELKENNDLPLFGEWQTEEYQPPI
AVDGKVPRNDFGNVYLFKPCMLPVGCVHLSLPNLHRVARKLDMDAAPAVTGFDFHAGYSH
AVTDGYIVCEEHEEILRAAWVEEQDIQRQKEREKREKRAVSNWTLLVKGLLIRERLKQRY
GKKNPGLGSLSQGDNNVDLSSDEEAGEDESPGGKTASETLAMSWPQNRQAEEEDGGNSSG
LKKKQKTKREKKGQDTHLFPFEKV
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggagagcgagcgtagggactcaggtcaatacaaagaaaccgaggaaggtg
ctgccggcgaagagccgcacagcaaaggctgcaagagccaagaagagagaggcagataat
ggcatcacagaggaagaggagaagctggagaggaagatcaaacccaagtcacgtttgtcc
tcaaagttggtggcgaagagcatctctccctccaaatgcaccaccagcaccaccactgat
gtcaacaccagtaaatacttccagtcaccagtcaaggaggaggagactgacagtgaggac
tttgacatggtgacatcccgagcacctgtggttactgtaaacgccaaaaaatctcagaaa
gaggaggagcaggacagtgaggaagacgaggatgactgggaggaagtggaagagctggat
gagccactgggtccagctgaagcactagaacccatcctgccttctcagcccgtggagata
gagattgagacacctgaagtcaggaaaaaaaagaagatccaggcggagtttgagtcgtat
ctgaggcggatgatgaacaaatgcaagaaagacctgctgatagacacacacaaggtccac
ctcatgtgcctgatagccagtggaatgtttcggaaccgtctgtgcagtgaaccagacctt
ctggccatcactctgtcgctgctgcctgcccactacggcaatgtcatgaaggaacgcatt
gaccaaaactacctctccggactgctcaaatggtttagagcaacattcaccctcaatccc
agtctttcctgtgaggagcgtccggacccccgggctatcctggagaggcggctggccagc
ctatcagccaggaaccaccaggagatgactcaactgttcctgttggtgctgaggtctctg
cagctcttctgcagattggttctttctctgcagccgattcctttgaaacccccatcagca
aagggcaaaggagctagaacatctcccggtgcctcaggaaaaagcagctcaaaccaagaa
acctccaagaccacctctcttcagctgaaggtctcacctggcaccaagagaccagctgca
gttggaaaagtcaagggagacagaggaggaaagaaagcaaagagaaaagaaaaaacggag
aacgaggaaagggttataacatccggaggacagagaccgaagaactcaaagcgccgcact
atcgcttcaaaggtcagctacaaggaggagagtcaaagcgaagatgaagaggtgcttagc
gatgaggatgagtttaaggcaagcagcgaggaggacagtgaggattcagagagtgaagct
aaatcatcgaaggggaaagggaggaaagtgataaacaataagaacactgcaggtagtggt
ggagggaaaaaactggtaaaaggtgagggggacaaagagggggaagaagaggaggacaat
gatgaagaaggagaaggaaaaacaaataacggaacgaagcgaaggagtggcaagaagaca
aagggtcctggagcggacgagtggatggaggtgtatctagaaaaaacatcttcctgggtt
tgtgtggatgttgagcagggtgtcgggatgcctcagctctgctcccagaatgcaacatcg
ccagtgacgtatgtggtgtcggtggacggggacgggtttctgaaggacctgggaaggaag
tacgaccccacctggatgacatcatccaggaagagacgggtggatgaagactggtgggat
gaaacgctcgagccattcctgggacccgagtatgagagggacaaaagggaggacaaggag
ctccagaataagcttatgaacaaacccctgccgatctccatagcggagtacaagaaccac
ccattgtacgctttaaagagacacatgctcaagtatgaagccatctacccttcaacagca
actgaactgggatactgcagaggagagccagtgtactccagggattgtgtgcacaccctc
cactccaaagacacatggttgaaagaagctcggactgtacgaatcggggaagaaccgtac
aaaatggtgaggggtttctcgaatcgttcgcgtaaggccaggatcatgtctgagctgaag
gaaaacaacgacctgcctctgtttggagaatggcagactgaagagtaccaaccgcctata
gctgtggatgggaaggttccccgtaacgatttcggtaacgtctacctctttaagccctgc
atgttaccggtgggctgtgttcacctcagtctgcccaacctgcaccgtgtggccaggaag
ctggacatggacgccgcccctgcggtgacaggctttgacttccatgcaggatactcacac
gctgtgactgatggttacattgtgtgtgaagagcatgaggagattctcagagccgcctgg
gtggaagaacaggacattcagagacagaaggagagagagaaaagagaaaagagggcggtc
tccaactggactctgctggtgaaaggacttctgatcagagaaaggcttaaacagcgctac
ggcaagaagaacccagggttggggagcctctctcagggagacaacaacgttgacctttcg
tctgatgaggaggcaggtgaggatgaaagtcccgggggtaagactgcatctgaaactctg
gctatgtcctggcctcaaaaccgacaagcagaggaggaggacggagggaacagcagcgga
ctgaagaagaagcagaaaacaaaacgagaaaagaaaggacaagacacacatttgtttccc
tttgagaaggtgtaa
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