Hippoglossus hippoglossus (Atlantic halibut): 117764926
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Entry
117764926 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: DIS3-like exonuclease 2
KO
K18758
DIS3-like exonuclease 2 [EC:3.1.13.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117764926
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117764926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
Rrp44_CSD1
CSD2
Rrp44_S1
Gp10_C
Motif
Other DBs
NCBI-GeneID:
117764926
NCBI-ProteinID:
XP_034446984
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All DBs
Position
7:8315555..8318900
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AA seq
1015 aa
AA seq
DB search
MLTVHVQHRSSKFNLYLDQXAKDLSFQREGNLPSTLVKAQSDRLNITQHKRDQLLNDLSD
SSDFSPSSLKGKGEESSLALHMERLSSRTAPQDCERQQDVTDRQRRRQRRDTPTSQDGDI
ESREEFSSVTLNDSYKQQKQQTKNKDSLASKEPNFDGRPQSPKKAGTSGQEQEKMKKKNL
PQHAEEEKSPEVPGTITQMSRPKSPYGKDKKTQRIQASTTNSPADKSKKRGKGSKKQVFD
SYMTAEDVSHGLKRGELIQGQLRINPKKYQDAYIPSPNDMRDIFLDGIVARNRALNGDVV
VIQVLPREQWKVVRSDTDCEGASESETQRKHLVKTPQKKKEHTPRPDATVGNCCRDQDEL
LSKVQNITLTDTDPSTPWSNGEILQKTANVVYIVEKKHSRAATGFIKFRPDKPFVMFAPV
DHRVPRINVPLVDCPADFSSRSGDYINTLFICRITNWSADSNFAEGRLAKTLGQAGEIEP
ETEGILTEYDVDSSEFSDSVLDCLPKNLPWTIPPEEMTKRRDLRNECIFTIDPSTARDLD
DALSCKQLPDGNFEMGVHIADVSYFVEEDNALDAIASQRATSVYLVQKVIPMLPPLLCEE
LCSLNPLTDRLTFSVIWKITPEGKILSEWFGRSVMRSCVKLSYDHAQSMIEAPEKLFSAG
ELPPVDPVHPIDEIHQAVLNLHSIAKNLRAQRFSGGSLRLDQMKLSFTLDRETMMPQGCY
VYQYRDSNKLVEEFMLLANIATAHHIYRKFPELALLRRHPPPNAKMVDELQELCDQLGID
LDLSSAGALHRSLNTTLGDDEYSSARKEVLTHMCTRPMQMALYFCTGVVKDEPLFKHYAL
NVPFYTHFTSPIRRYADIIVHRLLAASLKCGPHLGLSTEEVGKQASHCNDKRTASKRVQE
LSSGLFFGVFLKECGPLDSEAMVMRVLDQSFDVLVLRYGVQKRIYCKAVAGLASFHHRKV
GKKSELTLIWTPDDLEKPPVEQIISLFTLVEVQLQDNSAPMKYSAVLKRPDDNAP
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgctaacagtacacgtgcaacaccgcagcagcaagttcaatttgtatctggaccaannt
gcaaaggacttgtcatttcaaagggaaggaaatttgccaagcacgctggtcaaagcccag
agtgacaggctgaacataacacagcacaaaagggaccaattgcttaatgatttatctgat
tcaagtgacttctccccctcatctttgaagggtaaaggagaggaaagttcactggctctg
cacatggagaggctgagcagtcgcactgcgccgcaggactgtgaaaggcagcaagacgtc
actgacaggcagcgacggagacagaggagggacacccccaccagccaagacggagacatt
gagtctagagaggagttcagctctgtcacacttaatgattcctacaaacaacagaagcag
cagacgaaaaataaggactccttggcctctaaagagcccaactttgatggacgtccccag
tccccaaagaaagccggcacaagtggacaggaacaagagaagatgaagaaaaagaatctg
ccccagcatgcagaagaagagaagagcccagaggtgcctggaactattactcaaatgtca
aggcccaagtctccttatggtaaagacaagaaaacgcagcgaattcaagcttcaactacc
aattctccggcagacaaaagcaaaaagagaggaaaaggatccaagaaacaagtgtttgac
tcttacatgacagctgaggacgtttcccatggcctgaagagaggagagcttattcaagga
caactaagaatcaaccctaagaagtaccaggatgcttacatcccatctcctaatgacatg
cgggatatatttctggatgggattgtagctcgcaacagagcgctgaacggagatgttgtg
gtgatacaagtcctgcctcgagagcagtggaaggttgtgaggtcagatactgactgtgag
ggcgccagtgagtcagagacgcagagaaaacatctggtgaaaacaccccagaagaagaaa
gagcacacccccaggcctgatgctactgtgggcaattgctgtagggaccaggatgaactc
ttaagcaaggttcagaatatcaccctcactgacacagatccatcaaccccttggtccaac
ggggaaatactccaaaagactgctaatgtggtctacattgttgagaagaaacactccaga
gcagcgacaggcttcatcaagttccgaccagacaagccctttgtcatgtttgcccccgtg
gaccaccgggtgcctcgcattaacgttcccctggttgactgccctgccgactttagttcc
cgctcgggtgactacattaacacgttgttcatctgtcgcatcaccaactggtcagccgac
agcaactttgcagaaggacgactggctaagactctgggtcaagctggagaaatcgaacca
gagacagagggcatcctgacggagtatgatgtggattcttctgagttctcagatagcgtg
ttggactgcctgcccaagaacctgccctggaccatcccacctgaggagatgacgaagagg
agagacctgaggaacgagtgtatcttcacaatcgacccttccactgccagagatttggat
gatgctctttcctgtaaacaactcccagatggaaactttgagatgggagttcacattgct
gacgtgagctattttgtggaggaggacaatgctctggatgccattgccagccaaagagca
actagtgtgtaccttgttcagaaggtgatccccatgttaccgccgttgctctgtgaggag
ctgtgcagtctcaaccctctcaccgacagacttactttctctgtcatttggaaaattaca
cccgaggggaagatcctgagtgagtggtttggccgctcagtgatgcgctcctgtgtgaaa
ttgagttatgaccatgctcagagcatgatcgaggcccctgagaaattgttctccgctggg
gagctgccacctgtggaccctgtgcaccccatcgatgagatccaccaggctgtgctcaac
ctgcactctattgccaagaacctccgagctcaacgcttctcaggcggatccctcaggcta
gaccagatgaaactttctttcactctggatagagagaccatgatgcctcagggctgctat
gtttatcagtacagagacagcaacaagttggtggaagagttcatgctgctggcgaacatt
gccaccgcccaccacatctaccgcaaatttcctgagctggccctgctcagacgccaccct
ccaccaaatgccaagatggtggatgagctgcaggagctgtgtgaccagttgggcatcgac
cttgacctgtcgtctgcaggagcattgcataggagcctcaatactactcttggtgatgat
gagtactccagtgccagaaaagaagtcctcacccacatgtgcaccagacccatgcagatg
gcgttgtacttctgcacaggcgtagtgaaggatgagccgctatttaagcactacgccctc
aacgttcctttctacacacacttcacctcacccatcaggcgctatgctgacatcattgtg
caccggctgctggctgcttccctgaagtgtgggcctcacttagggctgtcaacagaggaa
gtgggaaaacaggcatcgcactgtaatgacaagaggacggcatcaaagcgagtccaggag
ctcagctcggggctcttctttggagtttttttaaaggagtgtggccccctggactctgag
gccatggtgatgagggtgttggatcagtcgtttgatgtgctggttctccgctacggagta
cagaaacgcatctactgcaaggctgttgcgggcctggcctcatttcaccatcgtaaggtg
ggaaagaaatctgagctgaccctgatctggacaccagacgacttagagaaacctccagtg
gagcagatcatttcactcttcactctggtggaggtgcagctacaagacaacagcgctccg
atgaaatacagcgcagtgctcaagaggcccgatgacaacgcaccataa
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