Hippoglossus hippoglossus (Atlantic halibut): 117765074
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Entry
117765074 CDS
T07778
Name
(RefSeq) troponin C, skeletal muscle-like
KO
K12042
troponin C, skeletal muscle
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04020
Calcium signaling pathway
hhip04814
Motor proteins
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117765074
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117765074
04820 Cytoskeleton in muscle cells
117765074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117765074
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
117765074
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
EF-hand_9
AIF-1
EH
SPARC_Ca_bdg
EF-hand_11
EF_EFCAB10_C
SAPC2_N
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
117765074
NCBI-ProteinID:
XP_034447219
LinkDB
All DBs
Position
7:complement(4441702..4448534)
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AA seq
161 aa
AA seq
DB search
MPTDAQSDARSFLTEEMIAEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPSREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDQTGKSEEELSECFRIFDKNGDGFVDREEFGEI
LHLTGESVVEEDIDEMFGESDTNKDGKIDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgacgcccaaagtgatgcccgctccttcctgacggaggagatgattgcagag
ttcaaggcggccttcgacatgttcgacaccgacggtggcggtgacatcagcacaaaggag
ttgggacaagtaatgaggatgctgggccagaacccgtcaagggaggagttggacgccatc
attgaggaggtggatgaggatggcagcggtaccattgacttcgaggagttcctggtcatg
atggtgcaacagttaaaggaggaccagactgggaagagtgaagaggagctctctgaatgc
ttccgtatttttgacaagaacggagatggtttcgtcgaccgggaggagtttggagaaatc
ctccatctcactggagaatcagtcgtagaggaagatattgatgagatgttcggagaatcg
gacacaaacaaggacggaaagattgattttgatgagtttctgaaaatgatggagaacgtc
cagtaa
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