Hippoglossus hippoglossus (Atlantic halibut): 117765085
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Entry
117765085 CDS
T07778
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117765085 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117765085 (lamb2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Oscp1
Laminin_II
Motif
Other DBs
NCBI-GeneID:
117765085
NCBI-ProteinID:
XP_034447228
LinkDB
All DBs
Position
7:4509915..4570000
Genome browser
AA seq
1848 aa
AA seq
DB search
MHPDILMPIMTVQLSLLMLALSVFGQDLPSGPHGCTDGSCYPATGNLLIGRAVNLTATST
CGLGGPEHYCIVSHLQESDKCFECSSQHRYDPYRHRNSHRIENVINLMDNIGSNTWWQSV
NGQENVNIRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTRTFP
GVSSNGLHHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVRDPYSLDIQELLRITNLRI
NFTKLNTLGDDLLDRRFDVLQKYYYALYELVVRGSCFCYGHASECAPVPGVDARENGMIH
GRCVCKHNSEGLNCERCKDFHHDLPWRPAEAENPHTCRECNCNGHSNQCHFDMAVYLATA
NYSGGVCDDCQHNTMGRNCEMCKPFYSQDQIRDIRDPRVCVACDCDPVGSLEGGVCDSHT
DPDMGMISGQCRCKANVKGTRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIIMMGAPCDQI
SGDCSCKRYVTGRYCNQCLPEYWGLSNDLAGCRPCDCDFGGAFNNRCMMENGQCDCRRHL
IGRQCSEVQPGYFCAPLDYYKYEAEDATAHSPSDPALPGKVRPQAETDCVQHLSNQLRRH
RRHRRITNSQQHRAALRRIRQLQQTPDVRTVHREHSPSHMVTWTGPGFARVKDGAGLVFT
IDNIPYAMEYDIMIRYEPESTEDWEAVVSITSVLLPSSLRCGNLLPTEQLYTVTLPHRNR
YIQMPRPFCFEPSNRYVVAIRFQRHGVSHRHLTAFILIDSLVLIPKYTELPGFQGNEPEA
EQRREEMIRYMCLDSFMITPMPALAEMCSKLICSISSIIHDGALSCQCDPQGSLSGECDR
VGGQCQCKPNVMGQHCDQCAPGTYGFGVNGCTACDCHSEGSLSHQCDPVTGQCQCRQGAT
GRMCSDCQPGQWGFPSCIPCQCNGHADLCDPSTGECRDCRDYTVGQLCERCVDGFFGNPV
LGSGEHCRPCPCPGNPGSDHFNGHSCQADHSTNQIICNCKQGYTGSRCDQCAPGYYGNPD
QPGGQCLPCECSGNIDTQDFESCDPRTGQCLKCLYNTDGPSCAHCQHGYYGNALTQDCRR
CTCVTAGTIQSACSDGQCHCDRQTGACPCRENVAGNNCDQCAPNHWNYGQDRGCEPCHCD
SQHALGAHCNMFTGQCHCRPGFGGKQCTECEQFHWGDPQVQCRECNCHPLGSEMAQCDRT
TGVCECREGAAGKQCDECARGFTDAFPKCVRCHPCFQLWDDAVCQNKRDLDHIQYTVQKI
LESGVTPGVDDTRIKELEMKLKQVQDLISADDNDRIHQLIGQSIDDLRAEIALTDGRLMG
VTRELNTTAAEEEALRRTLNDLERELRDINTTVAHKQRVIDDYLTSGFADQFEKIKKYYR
QSFEAEQKCNASVYSPSGAVEQSKETRALTEGLLDASRDKFLRSLAAQNKSLNELQQKAH
NLDEKVHLLSHKVCGGHSNDSVNGSCPDSQCGGAGCRDDQGNRVCGGNGCNGTVSASVAA
LNQAGLARNGLNAANEELQGVAKKLQDIAFLTQDVKNQAMNTLEKARKKKDQFENNNKKL
KDFIKKIRDFLTEEGADPESIEKVALQVLAIKLPFNKTTLDNMVMKIKDGLSNLTNMEDI
VNQTSQHISKAKELLEKAQQAKRRAEGVEDKVNSTKQALDVSEKAIEEARTTLEESNNNL
NSTRQATAEVEERLDQLEDKQMDVMMRLNNLSMGVEALRNKTEQNRQMAKNAKALANNAT
DMASSLEQSFNHTEKRYRELRMKVDSLGAESGDLNSINQMAKDMKKEADDLLNKAKNGIK
QLEKLEKKLKNNKQRMERQGLELDELKENATVVRDEIRDQVQKYSNCV
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagacatcctgatgcccatcatgactgtgcagctgagcctcctcatgctggct
ctcagtgtctttggacaagacctcccatcaggccctcatggctgcacggacggaagctgc
taccctgcgacaggaaaccttttgatcggacgtgctgtcaacttaactgccacatccaca
tgcggcctgggcgggcctgagcactactgcattgttagccatctgcaggagtcagacaag
tgtttcgagtgcagctcccaacaccgctacgacccgtaccgccacagaaacagccaccgc
attgaaaatgtgatcaacctcatggacaacattggaagcaacacctggtggcagtctgtc
aacggacaggagaacgtgaacatcagactgaaccttgaggccgaattccacttcacacac
cttatcatgaagtttaagacgttccgacctgcagctatgatcatcgagcgttcagctgat
ttcgggcgtacatggcgcccctaccgatacttcgcctccaactgtaccagaaccttccct
ggcgtctcttccaatggccttcaccacatcaatgacatcatctgcgaggaacgctactct
gacattgagccctccactaatggagaggttatttataaagtgttggatcctgccattcat
gtgagagacccatacagtttggacattcaagaacttctgcgaatcaccaacctacgaatc
aactttaccaagctaaacactctgggagacgacctgctggatcgacgttttgacgtcctg
cagaaatattattatgccctctatgagctggtggtcagagggagctgcttctgttatggt
cacgcctcagagtgcgccccagtgccaggggttgacgcccgggaaaacggcatgattcac
ggtcgctgtgtatgcaagcataattcagagggcctgaactgtgagcgctgcaaagacttc
catcatgacctgccctggagaccagcggaggcagagaaccctcacacatgcagagagtgt
aactgtaacggccactcgaaccagtgccactttgacatggcggtgtatttggccacggct
aactatagcggaggagtgtgcgatgactgtcagcacaacaccatgggacgcaactgtgag
atgtgcaagccgttctactcccaagaccaaatcagggatatcagggatccacgggtttgt
gttgcctgtgactgtgaccctgtgggctcactggaggggggtgtgtgtgacagtcacacc
gacccagacatggggatgatctcaggacagtgccgctgcaaagccaatgtgaaaggcacg
cgctgcgacgactgcaaagagggttactacggactcagccagaacgaccctctgggctgc
cagccttgcaactgtgaccctcgtggtatcattatgatgggagctccttgtgatcagatc
agtggggactgctcctgcaaaagatatgtcacaggacgctactgcaaccagtgtctgcct
gaatactgggggctcagtaacgacttggccggctgcagaccctgtgattgtgactttggt
ggagccttcaacaacaggtgcatgatggaaaatggccagtgtgactgcaggagacatctg
attggtcgacagtgctcagaagtgcagcctggatatttctgtgctccgctggactactac
aaatacgaggctgaagacgccaccgcacactcccccagtgaccctgcgctgccgggcaaa
gttcgtcctcaggcagagaccgactgcgttcagcacctcagcaaccaactgaggcgtcac
cgccgccaccgccgcatcaccaactcgcagcagcatcgggcggcgctgagacggatccgc
cagcttcaacagacaccggatgtgaggaccgttcacagagagcactctccgagccacatg
gtgacgtggacaggacctgggttcgcccgcgtcaaagatggtgctggcctggtcttcact
atcgacaacatcccctacgccatggagtacgacatcatgatccgctacgaacccgagtcg
acagaggactgggaggccgttgtcagtattacttcagttctgctgccctccagtctccgg
tgtggaaaccttctcccaactgaacagctctacactgtaacactgccacaccgcaatagg
tatatccagatgcccaggccattctgcttcgagcccagcaaccgttacgtggtggcaatt
aggttccagcgccacggtgtctcacacagacatcttacagccttcattcttattgactcg
ctggttctgattcccaaatacactgagcttcctggtttccaaggtaatgagccagaggcc
gagcagcggcgggaggagatgattcgctacatgtgtctggattccttcatgatcacaccg
atgcctgccctggctgagatgtgctccaaactcatctgtagtatttcctccatcattcat
gacggcgctctgtcctgtcagtgtgacccacagggttccctcagtggggagtgcgacaga
gtgggaggtcagtgtcaatgtaaacccaacgtcatgggtcaacactgtgaccagtgtgcc
ccaggaacctacggctttggagtgaatggctgcactgcctgcgactgccactctgagggt
tcattgagccaccagtgtgacccagttacaggccagtgccagtgtaggcagggagccact
ggacggatgtgctctgactgccaaccaggccagtggggcttccccagctgcatcccctgt
cagtgcaacggccacgcagacctctgtgaccccagcaccggggagtgtcgagactgcagg
gactacacggttggacagctctgtgaacgttgtgtggatggcttctttgggaacccagtg
cttggctcaggggaacactgtcggccctgcccctgccctggaaaccccggctcagatcac
tttaatggacactcctgtcaagctgaccacagcactaaccagatcatctgcaactgcaag
caaggctacactggatcccgttgtgaccagtgtgcccctggttactatggtaatccagac
cagcctggggggcagtgcctaccatgcgagtgtagcggcaacatcgacacccaggacttt
gagtcatgtgaccccaggaccggccaatgccttaagtgcctgtacaacaccgacggcccc
tcctgtgcacactgtcaacatggttactatggaaacgctctgacccaagactgcagacgt
tgtacctgtgtgactgctggcactatacagtctgcttgcagtgatggacagtgtcactgt
gaccggcaaacaggagcctgtccttgcagggagaacgtggctggaaacaactgtgaccag
tgcgctccgaaccattggaactacggtcaggaccgaggctgtgagccctgtcactgtgac
tcacaacacgctctgggtgctcactgcaacatgttcacaggccagtgccactgtcgtcca
ggctttggaggcaaacagtgcactgagtgtgagcagttccactggggcgaccctcaggta
cagtgtcgagagtgtaactgtcatccgctgggctcagagatggcccagtgtgacagaacg
acgggagtatgcgagtgccgggagggagcagcggggaagcagtgcgatgagtgcgctcga
ggcttcacggacgctttcccaaaatgtgtccggtgtcacccgtgctttcagctgtgggac
gatgctgtgtgccagaacaaaagggacttggatcacatccagtacaccgtgcagaagatc
ctggagagcggggtcacgccaggagtagatgacacgcgcatcaaagaactggaaatgaag
ttgaagcaggtgcaggatctgatcagtgcggacgacaacgacaggatccaccagctgatt
ggacagagcattgatgacctcagggctgagattgcactgacagatggccgtctgatgggc
gtcacccgagagctaaatacaacagcagcagaagaggaggcactgagacgtacactgaat
gatctggaaagagaactgagggacatcaacaccactgtggctcacaaacagcgtgtgatc
gatgactacctcacctcaggatttgcagatcagtttgagaaaatcaagaagtactatcga
cagtcattcgaggctgagcagaaatgcaacgcttcagtgtacagcccctccggtgcggtg
gaacagtccaaagaaacccgcgctcttactgaaggcctgctggatgccagtagagacaag
ttcctccgctctctggctgctcagaacaaatcattgaacgagctgcagcagaaggctcac
aacctggatgagaaggttcatctcctcagccacaaggtatgtggtggtcacagcaatgac
agcgtaaatggcagttgcccagacagccagtgtggtggtgctggttgccgagacgatcag
ggtaatcgtgtgtgtggaggaaacggatgcaacggaacggtgagcgcctccgttgctgcc
cttaatcaagctgggctcgccagaaacggtttgaacgctgccaatgaggagctgcagggt
gtcgcaaaaaagctccaggacatcgcctttctgacgcaagatgtgaagaaccaggcgatg
aacacgctggagaaagcccggaagaagaaagaccagtttgaaaacaacaacaagaagctc
aaagatttcattaagaagatcagagattttctcactgaggagggagccgatccagagagc
atagagaaagtggctctgcaggtgttggcgatcaagctgccgttcaacaagaccacgctg
gacaacatggtcatgaagataaaggacggcctgtccaacctcaccaacatggaggacatt
gtcaaccaaacctcgcagcacatcagcaaagccaaggagctgcttgaaaaagctcaacag
gccaagaggcgagcagaaggagtggaggataaagtcaatagcacgaagcaggcgttggat
gtgtctgaaaaggccatcgaggaagcacgaacaaccctggaagagtccaacaataacctg
aacagcacgaggcaggcgactgcggaggtggaggagaggctggaccagctggaggataag
caaatggacgtcatgatgcgtttgaacaacctctctatgggggtggaagctctgaggaac
aagacggagcagaacagacagatggcgaaaaacgccaaagccctggctaacaacgccact
gacatggcgtcctcactggagcagagcttcaatcacacagagaagcggtaccgtgagctg
cggatgaaggtggactctcttggtgctgagtcaggagatttgaacagcatcaaccagatg
gcgaaggatatgaagaaggaggcagacgacctcttaaacaaagctaagaacgggataaaa
caactcgagaaactggagaaaaagttaaagaataacaagcagcggatggagaggcagggc
ctggagctggacgagctgaaggaaaacgccaccgtggtgcgggacgagatccgggatcag
gtgcagaagtactctaactgtgtgtga
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