Hippoglossus hippoglossus (Atlantic halibut): 117765086
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Entry
117765086 CDS
T07778
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117765086 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117765086 (lamb2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Laminin_II
F5_F8_type_C
HTH_64
Motif
Other DBs
NCBI-GeneID:
117765086
NCBI-ProteinID:
XP_034447235
LinkDB
All DBs
Position
7:4619896..4670812
Genome browser
AA seq
1784 aa
AA seq
DB search
MRAPLLTLLCVVAAAAAQVPDYTHGCAHGSCYPATGDLLVGREKNLKASSSCGMRRKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRIDNVITTFKPHRKKSWWQSENGKSDVFIQ
LNLEAEFHFTHLIMTYKTFRPAAMLIERSADFARTWQVYRYFAHDCATAFPGISQGPLRN
INDIICESRYSDIEPSTEGEVIYRVLEPAIRIEDPYSPDIQNQLKITNLRVNFTKLHTLG
DNLLDPRAEIKEKYYYAIYELVIRGNCFCYGHASECAPINGIRDDIEGMVHGRCVCNHNT
KGLNCELCEDFHNDLPWKPAEGRNTNACKKCNCNGHSTTCHFDMAVYLAMANTSGGVCDD
CQHNTMGRNCEMCKPFYYKDPIKDMRDPRVCVACDCDPDGSQNGGMCDSHTDPSLGMVGG
QCRCKANVEGPRCDKCKTGFFGLSAENPQGCQPCWCDNRGTVLGSSQCDPISGDCFCKRL
VTGRSCDQCLPEHWALNHDLNGCRGCDCDIGGALDNLCSMESGQCRCRGHMMGRQCTQVE
SGYFFMAVDHFLYEAELAKMGQGCMLETKEHQPGRPATWTGMGFARVPEGGTLEFLVTNI
PYSMEYDLLIRYESQMPRDWEEVRITVIRPGPIPTSSPCGNTIPDDDRLTVSLHAGARFA
VPPQPVCLERGVTYTLRFEFRRYHDANSILTGADAVILVDSISLMPRHFSMEMFNAGDSA
SSIRKQTYERYRCHEGAKSVSRPLMSDTCAKLITSMSAIINDGALPCNCDPQGSVSSLCD
VRGGQCRCRPNVIGRRCDQCAPGTYGFGPSGCIACGCSLEGSVTRLCDKFTGQCQCRPGA
FGQHCDGCQAGHWGFPNCRPCQCNGHADKCDQRTGACINCKDNTGGDKCERCANGYYGNP
VLGIPFSGQCRPCPCPDGPNSGRHFAASCYQDNRNRQIICNCNQGYTGDRCDECAPGYFG
NPSQPGGHCQPCQCHNNIDMSDMGACDRQTGECRKCLYNTEGPSCGICKSGYFGDASRRN
CRKCTCNFLGTDSSQCMERGDCVCQRSTGQCQCLQNVIGLTCDHCAPNHWNLASGKACET
CGCDPNNSVTSSCNEFTGQCQCRDGFGGKTCTDCQENYWGDPRTQCRACDCDWRGIETSQ
CNRVTGHCLCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRIVQDLAVRTKALTER
AHEIQTTGLTGAYETAFRDLEEKLAQAQGIVNARNATAAAVATLMELIEDLRAQIGETTD
TLNRLEGDLTIVQDSNSEASKELSALEREAKELNLTSEQLHHQLDVLKNSNFLGAYDSIR
SSYNKSRDAERRANQSTTTRPSTVSQSADTRRRTERLITAKKDDFNRKNAANKRALGDLS
TKAQGLDIKKINERVCGAPGDAPCGESPCGGAGCRDDEGNRHCGGLNCNGAVAVADNALE
RAKHAEKELNKAMGEVEGLFNKVAEAKTKAEEAKGKAQAALDKATATKNKVERSNNDLRD
LIKQIRDFLTQEGADPDSIEAVANHVLELSIPASPLQIRHLADEIKDRVRSLSNVDAILA
QTQDNVRKAEQLLLDAKRARHHSEGVKTTAETVKQALVDAKTTQTSAEKAIARAKEDIDM
TEARLAQIESETSNGEKDLNDAMDRLGILGQEINALKTKRANNSMAAARAEETATMARDK
ANEAKQILDGQLTDKYHEVQQRVDSKAKAVQDAKKRAEGLRDEAKELLRDAQNKLQRLAE
LEKNYEENQRRLEGKARQLDGLEDKMKAILNDINRQIQIYNTCQ
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccccgctgttgacgctgctctgcgtcgtggctgctgccgctgcccaggtgccc
gactacacccacggctgcgctcatggcagctgctacccggcaacaggggacttgctggtc
ggaagggagaagaatctgaaggcctcatcttcatgtgggatgaggagaaaagagccgtac
tgtatcgtcagtcatcttcaggatgagaagaagtgttttgactgtgactctagacggcca
tatgaccctgtctacaacacgatcaatcaccggatagacaacgtaatcaccaccttcaaa
cctcaccgcaagaagtcctggtggcaatctgagaatggaaagtctgatgtctttatccaa
ttgaatctggaagcagagtttcatttcactcacttgatcatgacctacaagaccttccgt
ccagcggccatgctgatcgaacgctcagcagatttcgctcgcacctggcaggtctaccgc
tacttcgctcacgactgcgccactgccttcccaggaatctcccagggtcctttgcgtaac
attaatgatatcatctgtgagtcgcgttattctgacattgagccttcaacagagggagag
gtcatctacagagtgttggagcccgccatcaggattgaagatccatacagcccggacatc
cagaaccagctgaagatcacaaacctgagagtgaacttcaccaaacttcacacactggga
gacaacctgctggacccgagggcagaaataaaggagaagtattactatgccatatatgag
cttgtcatacgaggaaactgcttttgctacggccacgcctccgagtgcgcccccatcaac
ggcatcagggatgatatagaaggaatggttcacggcaggtgtgtgtgtaaccataacacc
aagggtttgaactgtgagctatgtgaggacttccacaatgacctgccctggaaaccagct
gagggacgcaacaccaacgcctgcaagaagtgtaactgtaacggccactccaccacgtgc
cactttgacatggcggtgtatttggccatggctaacaccagcggaggagtgtgtgacgac
tgtcagcacaacaccatgggacgtaactgtgagatgtgcaaaccgttctactacaaagac
cccatcaaggatatgagggacccacgcgtttgcgtagcgtgtgactgcgacccggatggt
tctcagaatggggggatgtgcgacagccacacagacccttccctcggcatggtgggaggt
cagtgccgttgcaaggccaacgtcgaggggccgcgttgcgacaagtgtaaaaccggcttc
tttggcctgagcgccgaaaaccctcagggctgccaaccttgctggtgcgacaacagagga
accgtgttaggaagctcccagtgtgaccccatcagtggagactgcttctgcaagcgactc
gtcactggacgcagctgtgaccagtgtctgcctgaacactgggcactgaaccacgacctg
aacggctgcagaggttgcgattgtgacatcggaggagcgctggacaacctctgctccatg
gagagcggtcagtgtcgctgccgcggccacatgatgggacgccagtgtacgcaggtggag
tccggatatttcttcatggctgtggatcacttcctgtatgaggcagagttggccaaaatg
ggtcagggctgtatgctggagaccaaggagcaccagccaggtcggcctgccacctggacg
ggaatggggttcgcccgggttcctgagggcggcaccctggagttcctcgtcactaacatt
ccctactccatggaatatgacttgctcattcgctacgagtcacagatgccacgggactgg
gaggaggtgcggataacggtgatccgtccagggccgattcctaccagcagcccgtgtgga
aacaccatcccagatgatgacaggctcacagtctccctgcacgctggagccaggtttgcg
gtccctcctcagcctgtgtgtctggagagaggtgtgacatacaccctccgctttgagttc
cgacgctatcatgatgccaacagtatccttaccggagccgacgccgtcatccttgtggac
tcgatctccttgatgccacgccacttctccatggagatgttcaacgcaggggattcagcc
tcgagcatcaggaagcagacctatgagcggtaccgctgccacgagggggcgaagagtgtg
tcccgtccgctgatgagtgacacctgtgccaagctcatcaccagcatgtcggccatcata
aatgacggcgctctgccttgtaattgcgacccccagggctccgtcagctctttgtgtgat
gtccgcgggggccagtgccgctgcaggcccaatgtgattggtcgacgttgtgaccagtgt
gcgccaggaacttacggcttcggaccctcaggctgcatagcctgcgggtgcagcttggaa
ggctctgtgactcgactctgtgacaagttcaccggtcagtgccagtgccgcccgggagcg
tttggtcagcattgcgacgggtgccaggcgggtcactggggtttccccaactgccgacca
tgccagtgtaacggacatgcagacaagtgtgaccagaggaccggagcctgcatcaactgc
aaggacaacactggaggagacaagtgtgaaaggtgtgccaatggttactacggtaaccca
gttctgggcataccatttagtggccagtgtcgtccgtgcccctgtccagacgggcccaac
agcggacgccactttgctgcatcttgttaccaggacaaccgtaacaggcaaataatctgc
aactgtaaccagggttacacaggtgatcgatgtgatgaatgtgccccgggttattttggc
aacccctcgcagcctggtgggcactgccagccgtgccagtgccacaacaacatagacatg
tcggacatgggtgcgtgtgacaggcaaaccggagagtgcaggaaatgcctctacaacact
gagggcccgagctgcggcatctgcaagagcggctatttcggggatgcttcccgacgcaac
tgcaggaagtgcacttgtaacttcctgggtactgatagcagccagtgtatggagcgggga
gactgtgtgtgccagcgctccacaggccagtgccagtgtctgcaaaacgtcataggtctg
acatgtgaccactgtgcccccaaccactggaacctggccagcgggaaagcctgtgaaacc
tgcggctgtgaccccaacaactctgtcacctcctcgtgtaatgagtttaccggtcagtgt
caatgtcgtgatggctttggagggaagacatgcacagactgtcaggagaactactgggga
gaccccaggacgcagtgcagagcctgtgactgtgactggcgtggcattgagacctctcag
tgtaaccgtgtgactggccactgcctttgccagcagggggtgtcaggtgtgcgctgtgat
cagtgtgccagaggcttctctggccagttccccaactgtcagccctgccaccagtgcttc
ggggattgggatcgcattgttcaggacctggcagtgcgcaccaaggctctgacagagcgt
gcccatgagattcagaccactgggctcactggtgcctatgagacggccttcagagatctg
gaggagaaactggcacaggctcagggaatcgttaatgcacgcaatgccactgctgcagct
gtagctaccctaatggagcttattgaagatctaagggcacagatcggtgagaccacggac
accctgaaccgtctggaaggagacctaaccatcgtacaggacagcaactctgaggcaagc
aaggagctgagtgctctggagcgagaggccaaagaactaaacctcacttctgagcagcta
caccatcagctggacgtcctgaaaaactctaacttcctaggtgcatacgacagcatccgt
agctcctacaacaagtctcgtgatgctgagaggcgtgccaaccaatcgacaaccaccagg
cccagcacagtcagccaatctgcagacacccgccgccgcaccgagcgccttatcaccgcc
aagaaggacgacttcaatcgtaaaaatgcagctaacaagcgtgcgctgggagacctcagc
accaaagcacagggcctggacataaagaagatcaacgagagggtgtgtggtgccccgggt
gatgctccctgtggggaaagcccatgtgggggtgcaggttgccgtgatgatgagggaaac
cgtcactgtggaggcctgaactgtaacggggctgtggcagtagctgacaatgctttggag
agagccaaacacgcggagaaggagctgaacaaagctatgggagaggtggagggactcttc
aacaaggtggcagaggccaagaccaaagcagaagaggccaagggtaaagcccaagcagct
ctggacaaagccacagccaccaaaaacaaagtggagcgctccaacaatgacctgagagac
ctcatcaaacagatcagggacttcctcactcaggagggagccgatccagacagtattgaa
gcagtggcaaaccatgttttggagctctccatcccagcttcgcctctccagatcagacat
cttgctgatgaaatcaaagatcgggttcgcagcctctcgaatgtggatgccatcctggcg
cagacacaggacaatgtccgcaaggcggaacaactgctgctggatgccaagagggcaagg
catcattctgagggagtaaagaccacagcagagacagtaaaacaggccttggtggatgct
aagactacccagacctcagcagagaaagccatagcaagagccaaagaggacattgacatg
actgaggcccgactggcacagatcgagtcagagacgtccaacggtgagaaggacctgaat
gatgccatggaccgcctgggcatcctgggacaggagatcaatgccctgaagaccaaacgt
gccaacaacagcatggcagcggcccgagccgaagagacagccaccatggcacgagacaaa
gcaaatgaagccaagcagattctagatggccagctaacagacaaataccacgaggtgcag
cagcgggttgacagcaaggccaaggccgtgcaggacgcaaagaaaagagctgagggcctc
agagacgaagcaaaggaactactgagagatgcccagaacaagctgcagagactagcagag
ctagaaaagaactatgaggagaaccagaggaggttggaggggaaagctcgtcagctggac
ggcttggaggacaagatgaaagccatcctcaatgacatcaacagacagatccagatctac
aacacgtgtcagtaa
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