Hippoglossus hippoglossus (Atlantic halibut): 117765111
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Entry
117765111 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1.1-like
KO
K06550
L1 cell adhesion molecule
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecule (CAM) interaction
hhip04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117765111
04517 IgSF CAM signaling
117765111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117765111
04090 CD molecules [BR:
hhip04090
]
117765111
04091 Lectins [BR:
hhip04091
]
117765111
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
L1 family
117765111
CD molecules [BR:
hhip04090
]
Proteins
117765111
Lectins [BR:
hhip04091
]
I-type lectins (Siglecs)
117765111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
117765111
NCBI-ProteinID:
XP_034447277
LinkDB
All DBs
Position
7:27335371..27354775
Genome browser
AA seq
1290 aa
AA seq
DB search
MCASQRRWMGCKGPCPPALPLILLLPLAFLSLTPPFAQGAINIPKDYKVHNMSQPPVLTE
MPISYTAFSTEDINLPCEASGLPAPSFRWVKDGEEFGLEKKGSGTLWAEWETDLAFYEGF
YRCYASNTLGTAVTQTVQVIVEAQPVLLKQQKVHKRAYEGESIVLSCNPPESTTPPHIHW
MDKRMVHIKQSDRVMLGLDGNLYFANLLKSDSRDDYICNAQYSAARTILPETSVNLTVMP
SNDVAHGRKPQLFRPLDSHSTVNALRDHSVTLECIPKGLPTPHVEWKKKDGSLDETSGVV
ENSDRWLTFNSITQTDDGEYECRAFNIHGSTAHSFTVTVEAAPHWVKEPQSLLYAPGETV
CDWDCQAEGIPTQTITWSINGQQITDVDYESRRAVSGGSLILREVEFADTAVYQCEASNK
HGTILLNTYIYVIELPPQILSSDGVVYRVADGKDVKMHCSSFGSPRPHVTWESEDTLPPL
SDPRVALLTNGTMELSGVSHDDSGTYTCSVQHTNISITAHLEVFNRTMILTSPQDVHVLR
GASALLDCRFYRPDPRLLNYQIVWKRDGQKLLETSESDKYIFFNNGTLKVTDVQSVDTAQ
YSCEVITDLDNVQANGSITVVARPDPPKDLSLSNLEDHSLTLSWIPGHSHNSPITEYVVE
AREEQHTEEGKWKWEQWQELPADFNHLQLNLHPHCIYRFRVIAINAIGRSHPSKASESHD
TPPAVPGSNPTGVRSDSTDPKTLIITWDEMDKRLHYGPDFQYKVSWRQAGGKSVHWNHSY
SKSPPFSVNDTGTYAPFEIKVQAVNSLGEGPAPEAEIGHSGEDVPEEAPTGVESTVMNST
VRVKWSEAQGVRGLLLGYKIYIRRLGAQVGRGRRSLGKLHHGDERGERSDRGTDRDTASR
VEVVHGMKTSKEVTGLQLFSSYELSVTAFNGKGEGPHSLPHRSAPPGPPASLRSESPTEK
SLILYWTPPVESNGILLGYMVQYQQEVESKDSSLQMEFISDPNVTHIALDHLDPSSQYTF
KVIARTATGDGPPVTLSGATLLDGVPPTNVTVVQDNTSFNLSWTPGERDRNHGFHIHYLR
KSAGGEWEESELVNSTQGFYSLTGLQPGTEYHLMIRHGNVTQWHEELWTIGPEPSEMPAG
FATQGWLIGLVSAILLLILILLILCLIKRSRGGKYAVKDKEDKEVDSEARPMKDETFGEY
RSLESDGDEKRSDSQPSLAGDSKLGSEDSLAEYGDSVDIQFNEDGSFIGQYSGRGPVPPG
NESSGPASPVTAAPPPPIAPSMSSILNRPS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgtcacagcgtcgctggatgggctgtaagggcccgtgtccccccgccctcccc
ctgatcctcctcctccctctggccttcctctccctcacgcctcccttcgctcaaggagcc
ataaacatccccaaagactataaagtgcataacatgtcacagcctccagtgttgacagag
atgccgatatcgtacacagcgttttctacagaggacataaatctgccctgtgaggcctct
ggtctcccagcacccagtttccggtgggtgaaagacggtgaggagtttgggttggagaaa
aaaggatcagggacgttgtgggccgagtgggagacggacctcgccttctacgaaggtttc
taccgctgctacgcttccaacacgctggggacggctgtgacacaaactgtacaagtcatc
gtggaggctcaaccggttcttctaaaacaacagaaagtacacaagcgggcgtacgaggga
gagagcatcgttctgtcctgcaacccccccgagagcacgactcctccacacatccactgg
atggacaagaggatggtgcacatcaagcagagcgacagagtgatgctcggcctcgacggg
aacttgtattttgcaaatcttttaaagagcgacagcagagacgactacatctgcaacgca
cagtattcagcagccaggaccatcctcccagagacgtctgtgaatctcaccgtcatgccc
agtaatgacgtcgcccacggtagaaagcctcaactgtttcgacccctcgactcccacagc
acggtgaacgccctccgagatcacagcgtcacactagagtgcatccccaaaggcctaccc
actccacatgtggaatggaagaagaaggacggcagcctggacgagaccagcggcgtcgtg
gagaactccgaccgctggctcaccttcaacagcatcacgcaaaccgacgacggagaatac
gagtgtcgggccttcaacatccacggctccaccgcacactcgttcaccgtcactgtggaa
gcggctcctcattgggtgaaggagcctcagagcctgttgtacgctccgggggaaactgtg
tgcgactgggattgtcaggctgaaggaatcccgacccagactatcacctggagcatcaac
ggtcagcagatcacagacgtggactatgaatcccgtcgggccgtgtccggcggcagtttg
attctgagggaagtagagtttgctgacaccgccgtgtatcagtgcgaggcctccaacaaa
catggcaccatcctcctcaacacctacatctacgtcattgagctgcctcctcagatcctg
tcgtctgacggagtcgtgtacagagtcgctgacggcaaagacgtcaagatgcactgctcc
tccttcgggtctccacgaccacacgtcacatgggagagtgaagacacacttcctccgctg
tcggaccctcgggtcgccctgctgaccaacggcaccatggagctgtcgggcgtcagtcac
gacgacagtggaacgtacacgtgctccgtccaacacaccaacatctccatcactgcacat
ctggaagttttcaatcgcacgatgattctgacgagtccacaggacgtccatgtcctccga
ggagccagcgctctgctcgactgtcgcttctaccgaccggaccctcggctgctcaactac
cagatcgtctggaagagagacggacagaagctgctggagacgtcagagagtgacaagtac
attttcttcaataatggaactttgaaagtgacggacgtccaatcagtcgacacggcgcaa
tattcgtgtgaagtcatcactgacctggacaacgtgcaagccaacggctccatcaccgtc
gtggctcgacccgacccccccaaagatctgtctctgtccaacttggaggaccacagcctc
acactcagctggatcccgggacactcacacaacagccccatcacagagtacgtggtggag
gcccgggaggagcagcacacggaggaggggaagtggaagtgggagcagtggcaggagtta
ccagccgacttcaaccacctgcagctgaacctccacccccactgcatctaccgcttccgg
gtcatcgccatcaacgcgatcggccgcagccaccccagcaaggcctcggagtcccacgac
acgccacctgctgttcctggcagtaaccccaccggtgtccgcagtgactccacagaccca
aagactctgatcatcacatgggatgagatggacaagcgtttacactacggcccggacttc
cagtacaaggtgtcgtggcggcaggccgggggaaagagcgtgcactggaaccacagctac
tcaaagtctcccccgttctcggtgaacgacacaggaacctacgcaccgtttgagatcaaa
gtccaggccgtcaactcgctcggagaaggaccggcaccggaagcagagatcggacactct
ggagaggacgtacctgaggaggcgccaacgggagtagagtcaacggtgatgaacagcacc
gtcagagtgaagtggagcgaggcgcagggcgtccgagggctgctgctgggatacaagatc
tacatcaggaggttgggcgcccaggttgggcggggccggaggtctctggggaaactgcac
catggggacgaaagaggggagaggtccgaccgagggacggacagagacacagcgagcaga
gtggaggtcgtccacggcatgaagacgtccaaggaagtgacggggctgcagctgttctcc
tcgtacgagctgtccgtcactgccttcaacggcaaaggggaggggccccactcgctgcct
caccgctcagcacctccgggtcctcctgcatccctgaggtctgagagcccgacagagaaa
tccctgattctctactggacgcctccagttgaaagcaacgggatcctgctgggatacatg
gttcagtaccaacaagaggtggagagcaaagacagttcgctgcagatggagttcatcagt
gatcccaacgtgacccacatcgcgttggaccatctggaccccagcagccaatacaccttc
aaagttatagcccgcaccgccaccggtgatggaccccctgtcactctgagtggcgccacc
ctgctcgacggagttcctccaacgaacgtcaccgtcgtccaggacaacacgtccttcaac
ctgagctggacacctggagagcgagacaggaaccacggcttccacatccactacctcagg
aagagcgctgggggtgagtgggaggagtcagagttagtgaactccacgcagggtttctat
tcgctgacaggcctccaaccaggaactgagtaccacctcatgatccgacatggaaacgtc
actcagtggcacgaggagttgtggacgatcggaccagagccttcggagatgcctgctggg
ttcgccactcagggctggttgatcggactcgtcagcgccatcctgctgctcatcctgata
ctgctcatcctctgcctcatcaaacgcagcaggggcgggaagtacgcagtgaaggacaag
gaagacaaggaggtggactctgaagctcgaccaatgaaagatgagacgtttggagaatac
agatctctggagagcgatggggatgagaagcgctcggacagccagccgtccctggccggg
gacagtaagctgggcagcgaagactctctggccgagtacggagacagcgtggacatccag
ttcaacgaggacggctccttcattggccagtacagcggccgggggccggttccccctgga
aacgagagctccggtccagcctcccccgtcacagccgccccgcctccccccattgctccg
tccatgtcgagcatcctgaaccggcccagctag
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integrated database retrieval system
