Hippoglossus hippoglossus (Atlantic halibut): 117765129
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Entry
117765129 CDS
T07778
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117765129
04020 Calcium signaling pathway
117765129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117765129
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117765129
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
DUF3713
Motif
Other DBs
NCBI-GeneID:
117765129
NCBI-ProteinID:
XP_034447320
LinkDB
All DBs
Position
1:26629179..26802324
Genome browser
AA seq
2325 aa
AA seq
DB search
MTSEEEEGPSVATTTAPSATAISRVTTAISGGDSDDAFTSSSPRGPCPYHLSCPQEKEEK
EEEIEEERIILEEERIEEEEEEEGVECDEGDASSDTSVLIVPYPELVPVVFFCLKQTTCP
RSLCIRMVSSPWFERVSMMVILLNCVTLGMYQPCENIDCSSDRCQILQAFDAFIYIFFAM
EMVIKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNVNFTAIRTVRVLRPLKA
INRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYLKENFTLS
TGINLPRPYYMADEDDERPFICSLPVDNGIMSCTDVPARREGGRTCCLDKDDALYRQSLG
LSPEPLANGSVSVAGLCVNWNQYYTRCHTGHSNPHKGAINFDNIAYAWIVIFQVITLEGW
VEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRARC
SSSSTLGSEPGDCYEALFQLVCHCIRKARRQTVALFNTLRGKPRGFRGAGRGRGGGGGRE
RKANGREGRERRAVLRHGPPCPHRNKPDHAAPGQPMALTAASASDGCHRCAAALSLTDGV
GPVRSATSGEPEEGAVEETDREGVQAGGNEKGKKDEDGARGCNPKKQCEDLWCDTRRKLW
GIVESKYFNRGIMIAILINTISMGIEHHEQPDELTNVLEICNIVFTSMFSLEMILKLTAF
GSFSYLRNPYNVFDGVIVIISVCEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVV
LMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTETGDTVPDRKNFDSLLWAIVTV
FQILTQEDWNVVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRS
YSDDDRSSSNFDESERHDSIKLSDPRICTLTPNGHLELGALSGPRGSYSSERRSFTIESR
KSSVMSLGKSSLERRSLSLRHGRSPNYHNWGRPFAPQSAWSRRSSSNSLGRRSYRFGGAP
LVGGSLRLHSTRSPHSYTYAAEQESLLSHPPHSHHPLLPHHPPPLFLSRHFSAKTDRRAL
SLELPELLRAGGQPPGLPPVHPDPGRRSGSGTGGSITGGSGAGSGYGTEHRDCNGKAPGP
HTQLMTEVYPQVNARKDRTDLDEEIDYSLCFRVQKMMEVYKPDWCETREEWSVYMFSPQN
KFRLLCQSIIAHKLFDYIVLAFIFLNCITVALERPRILQGSLERLFLTISNYIFTAIFVT
EMTVKVVSMGLYLGESAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRT
LRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCVGFD
VKNITNKSDCLAANYRWIHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQP
QTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEK
KRRKAQKLPYYASYGRTRLAIHTLCTSHYLDLVITFIICINVITMSLEHYSQPQSLETTL
KYCNYFFTSTFVIEATLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLPI
NPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE
LFGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGRPGSD
YGCHAGLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELELA
QGGLCCMGGIGAIAGATGGAASGASGAGGVSGAITAGTVAGPSGVVMAPLRDGGGGGGGS
AAHEGHTHHRCRLYSPAQESQWLDSVSLLIKDSLEGDMIDNLSGSVFHHYCSAPICKDCK
SHPQEVRLAEVEQASLMSEQMSDKSSSPALPDDLSLDEHSVYQLLVRDRQMGSSDSHSSE
ECPPQVGYTGLRPSSSGSEEGTQELLEVGVQPQISPPSLEQQSQAHFTDGDGESCSGGGG
GSSPVFHLPADFFHPAAAAHPGSPGNSVGPGDRGASMSASPASWASLRSPGANSRPLSSQ
HPSHSDSSLATGSSEGSLQTTLEEGLSFSVSPPRDLDLRVPLPCPPPSHHLHPQVPDTGD
QGNPVLKRRSTTLTLKATRGHQRSQRSQSSCGGGSTSPGCPRQDSIDPSDEDVGMGTGGD
GCRQTYNSEHLSETLNSLSLTSLLTTGSLAPQLVKKCNSTGSLDQTNLSARSKDGRHVYG
IDAHGYLSNPWTEGRARGDGENSDITGFSVESSRRPSDTTFRKNR
NT seq
6978 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggaggaggagggccccagcgttgcaacaacaacggcaccgtcggcgaca
gcaatctccagggtaacaacagccatatctgggggcgacagcgatgacgccttcacgtcc
tcctccccccgcggcccttgcccgtaccacctctcatgtccccaggaaaaggaagagaaa
gaggaggaaatagaggaggaacggattattctagaagaagaaaggattgaggaggaggag
gaggaggagggtgtggagtgtgatgaaggtgacgccagcagtgacaccagtgtgttgata
gtgccctaccccgagctggtacctgtagttttcttctgcctcaagcagacaacctgccct
cgcagcttgtgcatccgcatggtctccagcccgtggttcgagcgagtcagcatgatggtg
atcctgttgaactgtgtgaccctgggaatgtaccagccctgtgagaacatcgactgctcc
tcggaccgatgccaaatcctacaggcctttgatgcattcatctacatcttcttcgcgatg
gagatggttataaagatggtcgccctggggatcttcggtcgccgctgttacctcggggac
acgtggaatcgcctggatttcttcatcgtcatggcagggatggtcgaatactcgctggac
cttcagaacgtcaacttcacggctatcagaacagtgagagtactacgacctctcaaagcc
attaaccgggtgccaagtatgcgtatcctggtcaacctgctgctggacactctgcccatg
ctgggaaacgtcctcctgctctgcttcttcgtcttcttcatcttcggcatcatcggcgtg
cagctgtgggcggggctgctgaggaaccgctgctacctgaaggagaacttcacgctctcc
acaggcatcaatctacctcgaccctactacatggctgacgaggatgacgagcggcccttc
atctgctccctgccggtcgacaacggcatcatgtcctgcacggacgtcccggctcgccgc
gaggggggccggacgtgctgcctggacaaagacgacgccctgtaccgccagtcgctgggc
ctgagccccgagcctctggccaatggcagcgtgagtgtagccgggctgtgtgtcaactgg
aaccagtactacaccaggtgtcacaccggacacagcaacccccacaaaggagccatcaac
ttcgacaacatcgcctacgcttggatcgtcatctttcaggtgatcactctggagggctgg
gtggagatcatgtactatgtgatggacgcacactccttctacaacttcatctacttcatc
ctgctcatcattgtcggttccttctttatgatcaacctgtgcctggtcgtcatcgccacc
cagttctcagagaccaagcagcgggagcaccagctgatgcaggagcagagggctcggtgt
tcgtcctcctccaccctcggcagtgaacccggggactgctacgaagcgctcttccagctg
gtctgccactgtatccgcaaggcccggagacaaaccgtggccctcttcaacaccctgcgg
gggaaacctcgcggcttccggggcgctggaagaggcaggggaggaggaggagggagggag
aggaaggccaatggacgagaaggacgtgagaggagagcagtgctgcggcacggtcctccc
tgtccccaccgtaataaacctgaccacgccgcacccggtcaacccatggccctcaccgcc
gcctcggcatctgacggctgccatcggtgcgccgcggccctgtcactcactgacggtgtg
ggacccgttcgcagtgcgaccagtggggagccagaggagggcgctgtggaggaaacggac
agggagggggtacaggccggtggtaatgagaagggcaagaaagacgaggacggggcaagg
ggctgtaatcctaagaaacagtgcgaggatctgtggtgcgacacgaggaggaagctgtgg
ggcatcgtggagagcaagtacttcaaccggggcatcatgatcgccatcctgatcaacacc
atcagtatgggaatcgaacaccatgagcagccagacgagctcaccaacgtcctggagatc
tgcaacatcgtcttcaccagcatgttctccctggagatgatcctcaagctcacggcgttc
ggttctttcagctacctgcggaacccctacaatgtgtttgacggagtcatcgtcatcata
agtgtgtgtgagatcgtgggccagtccgacggcggcctgtctgtgctgcggaccttcagg
ctgctgagggtcctgaagctggtgaggttcatgccggcgctgaggagacagctcgtcgtc
ctcatgaagaccatggacaacgtggccaccttctgcatgctgctcatgctcttcatcttc
atcttcagtatcctggggatgcacatcttcggctgtaagttcagtcttaagacggagacg
ggggacactgtgccggacaggaaaaactttgactccctcctctgggccattgtcactgtt
ttccagattctgacccaggaggactggaacgtggttttgtacaacggcatggcagcgact
tcgccgcttgcagctctttactttgtggccctcatgaccttcggaaactatgtcctcttc
aacctgctggtggccatcttggttgagggttttcaggcagagggtgacgccaatcgttct
tactcggacgacgaccgctcgtcctccaactttgacgagagcgagagacacgactccatt
aagttgtctgacccaaggatctgcaccttgacgcccaacggccacctggagctgggcgct
ctctcgggaccccgaggatcctactcctccgagaggcggagcttcaccatcgagtccagg
aagagcagcgtgatgagcctgggcaagagcagcctggagagacgctccctctctctgcgc
cacggccgtagtcccaactaccacaactgggggcgccctttcgctccgcagtctgcatgg
agccgcagatcgagctccaacagtcttggtcggaggagctacaggttcggtggagctcct
ctggtcggaggcagcctccgtctgcacagcacccgctccccccactcctacacctatgcc
gccgagcaggagtcgcttctctcccacccgccccactcccatcatcctctactgccgcat
catccccctccgctgttcctgtcgagacacttttctgcaaagacggatcgccgggctctc
tccctggagctgcctgagctgcttcgggcgggcggccagcccccaggcctgccccccgtc
catccagaccccgggaggaggagcgggtccgggacaggggggtccatcacaggagggtct
ggagccggcagtggttatggaacggaacaccgagactgtaacggcaaggccccgggtccc
cacacccagctgatgactgaggtttaccctcaagtcaacgcacgaaaagacagaacagac
ctggatgaggagatagactatagtctttgtttccgtgtccagaagatgatggaggtctat
aagccagactggtgtgaaaccagagaggagtggtccgtctacatgttctccccccagaac
aagttcaggctgctctgtcagtccatcatcgcccataagctcttcgactacatcgtcctg
gccttcatattcctcaactgcatcacggtggctctggagaggccgaggattctgcagggc
agcctcgaacgactgtttctcaccatttccaactacatcttcaccgccatttttgtcacg
gagatgactgtcaaggtggtgtccatgggtctgtacctgggggagtcggcctatctcagg
agcagctggaacattctggacggtttcctggtcttcgtctctttgattgacatcgtggtg
tccatggcgggcggcgccaagatcctcggcgtgctgcgcgtcctcaggctgctcaggaca
ctgcgtcctctcagggtgatcagccgggctccaggcctgaagctggtagtcgagaccctc
atcacgtccctcaaacccatcggcaacatcgtcctcatctgctgcgccttcttcatcatc
ttcggcatcctcggcgttcagctcttcaaagggaagttcttctactgtgtgggcttcgac
gtcaagaacatcaccaacaaatccgactgtctggctgccaactatcgatggattcaccac
aaatacaactttgacaacctcggacaggctctcatgtccctgttcgtgctggcctccaaa
gacgggtgggtcaacatcatgtaccacggcctggacgcggtgggaattgaccagcagccg
cagaccaacaacaatccctggatgctgctctacttcatctccttcctcctgatcgtcagc
ttcttcgtcctcaacatgtttgtgggcgtggtggtggagaacttccacaagtgtcggcag
caccaggaggtggaggaggccaagcgccgcgaggagaaacgccagcgccgcatggagaaa
aagaggagaaaggcccagaagctgccgtactacgcctcttacggccgcacccgcctggcg
atccacactctgtgcaccagccactacctggatctggtcatcaccttcatcatctgcatc
aatgtcatcaccatgtccctggagcactacagccagccgcagtctctggagactacgctg
aagtactgcaactacttcttcacctccacctttgtgatcgaggccactctgaaactggtg
gccttcggcttccgacgcttcttcaaggacagatggaaccagttggacctggccattgtg
ctgctctcagtgatgggcatcaccctggaggagattgagatcaatgcctccctcccaatc
aaccccaccatcatcaggatcatgagggtgctcaggatagcacgagtgttgaagttgttg
aaaatggcaacagggatgagagctctgcttgacacggtggtccaggctcttcctcaggtg
gggaacctgggtctgctcttcatgctgctgttcttcatctatgctgctctgggagtggag
ctgttcggagaactggtgtgtaacgccgactacccctgcgaggggatgagccgccacgcc
acctttgaaaacttcggcatggccttcctcactctcttccaagtttccaccggggacaac
tggaacggcatcatgaaggacacgctgagggaatgtccaccaggccgtccgggcagcgac
tacggctgtcacgccggactgcagttcatctctcccatgtatttcgtgtccttcgtgctc
acggctcagttcgtcctgataaacgtggtggtggccgtgctcatgaagcacctggacgac
tccaacaaggaggcgcaggaggacgccgagatggacgccgagatcgagctggagctggct
cagggaggcctctgctgcatgggaggcatcggagccatcgccggggccacgggtggcgcc
gccagtggggcgagtggagccggaggagtgtccggtgccatcacggcggggacggttgcg
ggaccgagcggtgtagtgatggcaccgctgcgagatggaggaggaggaggaggaggctct
gcagctcacgagggacacacacaccatcgatgtcggctctactctccggctcaggagagc
cagtggctggacagcgtgtctctgctgattaaggactcgctggaaggagacatgattgac
aacctctccggttcagttttccaccactactgctccgcccccatctgcaaggactgcaag
agtcacccgcaagaggtccgactggctgaggtggagcaggcatctctcatgtcggagcag
atgtcagacaagtcatcgtctccggcgctgcctgatgacctcagcctcgacgaacacagc
gtctaccagctgctggtccgagacagacagatgggcagcagtgactcccacagttcagag
gagtgccccccccaggtgggctacacagggcttcgtccgtccagctcaggaagcgaggag
gggacgcaggagttgttggaggtgggtgtccaacctcagataagtcctccttcgctggag
cagcaaagccaggcacacttcacagacggtgatggagaaagttgcagcggaggtggtggt
gggtcgtcgcccgtcttccacttaccagcagacttcttccacccggctgccgcggctcat
ccgggcagtccggggaacagcgtcggccccggagacaggggggcgtccatgtcggcctct
ccagcctcctgggcgtccctccgctcacccggagccaacagcaggcccctgagctctcag
cacccgtcccacagcgactcgtccctggccacgggcagttcggagggcagcctgcagacc
accctcgaggagggtctcagcttcagcgtctccccgcctcgggacctggatctccgtgtg
cctctcccctgccctcctccgagccaccacttacatccacaggtaccagacacaggagac
cagggcaaccctgtgctaaagagacgcagcactactttgaccctcaaagccaccaggggg
caccagaggagccagaggagccagagcagctgcggcggtggcagcaccagccccggctgt
ccccggcaggactccatagacccgtcggatgaggacgtgggcatggggacaggcggagac
ggctgccgtcagacctataacagcgaacacttgtcggagacactgaacagcctctcactg
acgtcgctgctcaccacgggctctctggctccccagctggtgaagaaatgtaacagcaca
ggctcgctggaccaaaccaatctatccgcacggagtaaagatggacgccacgtctacggc
atagatgcccacggttacttgtccaacccctggacagaaggaagggcgagaggtgacggt
gagaacagtgacatcacaggcttcagcgtggaaagcagccgccgaccctcagacacaacc
ttcaggaagaacagatga
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integrated database retrieval system
