KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117765226
Entry
117765226         CDS       T07778                                 
Name
(RefSeq) host cell factor 1-like isoform X1
  KO
K14966  host cell factor 1
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03083  Polycomb repressive complex
hhip04980  Cobalamin transport and metabolism
hhip05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    117765226
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    117765226
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117765226
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hhip01009]
    117765226
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hhip03036]
    117765226
   03029 Mitochondrial biogenesis [BR:hhip03029]
    117765226
Protein phosphatases and associated proteins [BR:hhip01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117765226
Chromosome and associated proteins [BR:hhip03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     117765226
   HMT complexes
    COMPASS/SET1 complex
     117765226
    MLL-HCF complex
     117765226
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     117765226
Mitochondrial biogenesis [BR:hhip03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    117765226
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 Kelch_2 fn3
Other DBs
NCBI-GeneID: 117765226
NCBI-ProteinID: XP_034447466
LinkDB
Position
7:26798280..26809904
AA seq 1565 aa
MASDPAVLQPRWKRVAGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATN
QWFIPAVCGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLKAKA
PKNGPPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSVVGW
EVPLTSGPPPPPRESHTAVVTSGRGENRLIIYGGMSGCRLGDLWVLDIESLTWTKPALSG
TAPVPRSLHSATAINNKMYVFGGWVPLVMDDVQEATHEKEWKCTNTLACLNLDNMCWDTV
LMDVLEESVPRARAGHCSVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPCPPSR
VQLVRANTSSLEVSWGPSQTADMYLLQLQKYDIPATPASSPAPNPVPTATPAVSSPKSPA
PVAVASANQSVTLVPSQILSIPGSPLAAAAKAPAVLKVAAAPGSVGGASIVTVRQATPKS
PVAVTTLPAGVRMVVPAQSGQATPIGSSPQMSGMAALAAAAASTQKIPPSSAAVLNVAAG
AAIVKTVTGSPGSSSLPIKMASPVTMVTSPATRMLKTAAAQVGGASVVSTPGTPSRPVIT
VHKSGTVTVSQQAQVVTTVVGGVTKTFTLVNSPLGVGGGGALINNLGKVLSVVQTKPGTV
TGQAGSSSIAQMIQKGALPAGTILKLVTSADGKQKTILSTVQAGSMATKPNVLGVSPTTA
KPGTTFIKTIPVSALHGGAGGNSPITILTTKGVTPGTMGKIITTVPKITAGGQQGVTQVV
LKGAPGVPGTILRTVPMSGVRLVSPGSKPSVATLVVKTTTAGVSSLGTVTGSVSTTLAGG
AIGSANASLATPITTLTAIATLASQVTTATAAAAIPTQVTLITTPSGAEAQSLVQDLPVS
IMASPTSEEPGSGTSTAMVEETTDTETAVMSICSNPPCETHETGTTNTSTVATATMGGNN
RVCSNPPCETHETGTTNTSTVATATMGGNNRVCSNPPCETHETGTTNTSTVATATMGGNN
RVCSNPPCETHETGTTNTSTVASSSMSQALQVCSNPPCETHETGTTNTATTATAQQGGDV
LQVDSTDPTTSSDPTSSTANRNRAVTMVTQATPTPGPSIPMISSVVKEDRVESSETEAVA
MVTGEEPEPTDSQPAAVTLQVHMEGSKKAAQVATTDLPQELMSSEGDAGEVVPGTTTLML
TTGLTPDQLTAQQATIQAVLQAAGHIGGAANSVDQSVPIILTQQELAALVQQQQQLQDIH
AHPEPQHSSLPTEGLAPADSLNDPAAELTSSAVTSAVARLASTFSPTPPLTSVLAKIQPV
ATVTEATNGITATKEPQGVEVKSSVRNSRWYDVGVVKVTNMVVSHFYIPYDDNMAEDDSG
VVPDYSQMRKVELQPGTAYKFRVAGINICGRGAFSEVSAFKTCLPGFPGAPCAIKISKNL
DGAQLTWEAPAVTWGKITEYSVYLAIQSSHAASSVSGPAQLAFMRVYCGTSPSCLVQASS
LANAHIDYTTKPAVIFRIAARNQKGYGPATQVRWLQENKDTKTTVKRGGTTQLKPVGPKK
FKTDQ
NT seq 4698 nt   +upstreamnt  +downstreamnt
atggcatccgaccccgcagtgctacagccccgctggaagcgcgtcgcgggctggaccggc
ccggtgccgcggccccggcacggacaccgagctgtggccatcaaggagctgatggtggtg
ttcggcggagggaacgaggggatcgtggacgagctgcacgtctacaacacagccaccaac
cagtggttcatccctgcggtctgtggtgatgtcccccccggctgtgccgcctatggtttt
gtatgtgacgggaccaggctgttggtgtttggcgggatggtggaatatggtaaatacagc
agtgacctgtacgagctgcaggcgagtcgctgggagtggaaacgtctaaaggccaaagct
ccaaagaacggcccgcccccctgccctcgcctcggacacagcttctctttaattggtagc
cgctgttacctttttggaggcctggctaatgacagcgaggatcccaagaacaacatcccc
aggtatctgaacgacctgtactgtctggagctgcgcccaggatccagcgtggtcggctgg
gaggtcccactgacttcaggtccgccaccgcctcccagagagagtcacacggctgtggtg
acgagcggccgcggagaaaaccgactgatcatctatggagggatgagcggctgcagactg
ggtgacctgtgggtccttgacatagagtctctgacctggaccaaaccagccctcagtggg
accgcccccgtccctcgcagcctccactcggccactgccatcaacaacaagatgtatgta
tttggaggttgggttcctctggtgatggatgatgtccaagaggcgactcatgagaaggag
tggaagtgcaccaacacactggcctgcctcaacctggacaacatgtgttgggacacagtc
ctgatggatgttctggaggagtctgtccccagagctcgagcaggtcattgtagtgtctcc
atcaactccagactctacgtctggagcggcagagacggatacaggaaggcctggaacaat
caggtgtgctgcaaggacctgtggtacctggagacagagcgtccctgtcctccctctcgg
gtgcagctggtccgggccaacacgtcgtctctggaggtgagttggggcccgtctcagacg
gcggacatgtacctgttgcagctgcagaagtacgacattcctgccacacctgcatccagc
cccgcccccaaccccgtgcccacagccacacctgcagtcagctcccccaagagccccgcc
cccgttgcagtggcatcggccaaccagtccgtcacgctggtcccctcccaaatcctctcc
attcctggaagcccattggctgctgctgcgaaagcaccagctgtcctgaaggtggcagca
gctccaggttcagtgggtggagcctccattgtcacagtgagacaggccacacctaaatcc
ccagttgccgtgacaacgcttcctgcaggcgttcgtatggtggtacctgctcaatctgga
caggcgacgccaataggcagcagccctcagatgagtggaatggcggcattggcagcggcg
gcggcatcgactcagaagatccccccatcgtcagcagcggtgctgaatgtcgctgcagga
gccgcgatcgtgaagacggtgaccgggagtccaggatccagcagcctgccaatcaaaatg
gcctctcctgttaccatggtgaccagcccggccactcggatgttaaagaccgctgccgct
caggtgggcggggcctcggttgtctcaactcctggcaccccgagccgaccggtcatcaca
gtccataagtcggggacagtgactgtctcccaacaagctcaggtggtcaccacagtggtg
ggtggagtcacgaagaccttcactctggttaacagtccactcggtgtgggaggaggcggg
gctctgatcaataacctgggaaaggtgttgtcagtggttcagaccaaaccaggaactgtt
actggtcaggctggcagcagctccatcgctcagatgatccagaagggcgctctcccagca
ggaaccatcttgaagttggtgacgtctgcagacggtaaacagaagaccatcctcagcaca
gtgcaggcaggatccatggcaaccaaacccaacgtccttggtgtctccccgacaaccgcc
aaacctggaaccaccttcatcaagaccatcccggtgtctgcgctgcacggcggtgcaggt
ggaaacagtccaatcaccatcctcaccactaagggggtaacgccaggaactatgggtaaa
atcatcaccacagtccccaagatcactgctggaggtcaacagggggtcacacaggtggtg
ttaaagggagctccaggtgtacctggtaccatcctcaggactgttcctatgagcggagtc
agactggtctcacctggatccaaacctagtgtcgccactctggttgtcaagacaaccaca
gcaggtgtgtccagtctggggacagtaacaggaagtgtctccaccacgctggcaggtgga
gccattggttctgccaacgcctccctggctacgcccatcaccaccctgaccgccattgct
acacttgccagccaggttaccacggcaaccgctgctgcagcgatacccacacaggtgact
ctgatcacaactccgagcggagctgaagctcagtcactggtccaggatctgcccgtctcc
atcatggcgtctcctacatcagaagagcccggaagtggtacaagtactgcgatggtagaa
gagactacagacactgagacagcagtgatgtctatctgctccaacccgccgtgtgagact
cacgagacggggacgaccaacacctccactgttgccacagcaaccatgggaggtaacaac
cgagtgtgctccaacccgccgtgtgagactcacgagacggggacgaccaacacctccact
gtcgccacagcaaccatgggaggtaacaaccgagtgtgctccaacccgccgtgtgagact
cacgagacggggacgaccaacacctccactgtcgccacagcaaccatgggaggtaacaac
cgagtgtgctccaacccgccgtgtgagactcacgagacggggacgaccaacacctccact
gtcgcctcctccagcatgagccaagcactacaggtttgttcaaatcctccatgtgagact
cacgagaccggaaccaccaacacagcgaccacagcaacagctcaacagggcggagacgtt
cttcaagtagactccacagaccccaccacctcttctgaccccacctcctccacagccaat
cggaacagagctgttaccatggttacacaggcaacgcctacacccggaccatccatacct
atgatctcctctgtggtcaaagaagacagggttgagtcctcagagacagaggctgtcgcc
atggttacaggggaggaacctgagccgacagatagccaaccagcggctgtaactttacag
gttcacatggagggcagcaagaaagctgcacaggtggcgaccacagatcttcctcaggag
ctgatgtcatcagaaggggacgcaggtgaggtggtccctgggaccactaccttgatgttg
acaacaggactgaccccagatcagctgactgctcagcaggcaacaatacaggcagtactg
caggcagccggacacataggtggagctgcgaactccgtggatcaatctgtccccatcatt
ttgactcagcaggaactggcagctctggttcaacaacagcagcaactacaggacatccac
gcccacccagagccacagcacagcagcctgcccacagagggccttgctccagcagacagc
ctcaatgacccggcagcagagctgacctcatcagcagtaaccagcgctgtcgccagatta
gccagcacgttcagccccacccctcctctgacatcagttctggcaaagattcaacctgtt
gccacagtgactgaggcgaccaatggcatcacagcgaccaaagagccgcagggtgttgag
gtgaagtcttcggtgaggaacagtcgatggtacgatgttggcgtcgttaaggttacaaac
atggtggtctctcacttctacatcccatatgacgacaacatggccgaagacgactcaggt
gtggtacctgactacagtcagatgaggaaggtggagctgcagccggggacagcctataag
tttcgtgttgctgggatcaatatctgtggccgtggagcgttctctgaggtgtctgcattt
aaaacatgtctgcctggtttccccggagcgccatgtgccatcaagatcagcaagaacctg
gacggggctcagctcacctgggaggctccggctgtcacgtggggcaagatcacggagtac
tcggtgtacctcgccatccagtccagccatgccgcctcctccgtttcaggcccggcacag
ctggccttcatgagggtgtactgtggtaccagcccgtcctgcctggtccaggcctcaagc
ctcgccaacgcacacatcgactacaccaccaagccagccgtcatcttccgcatcgcggct
cgcaaccagaagggctatgggccggccacccaggtcaggtggttacaagaaaataaagac
acaaaaacaacagtgaagagaggaggaactacacaactgaaacccgtcggaccaaagaaa
ttcaaaacggaccaatag

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