Hippoglossus hippoglossus (Atlantic halibut): 117765226
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Entry
117765226 CDS
T07778
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03083
Polycomb repressive complex
hhip04980
Cobalamin transport and metabolism
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117765226
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117765226
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117765226
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117765226
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117765226
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117765226
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117765226
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117765226
HMT complexes
COMPASS/SET1 complex
117765226
MLL-HCF complex
117765226
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117765226
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117765226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
117765226
NCBI-ProteinID:
XP_034447466
LinkDB
All DBs
Position
7:26798280..26809904
Genome browser
AA seq
1565 aa
AA seq
DB search
MASDPAVLQPRWKRVAGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATN
QWFIPAVCGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLKAKA
PKNGPPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSVVGW
EVPLTSGPPPPPRESHTAVVTSGRGENRLIIYGGMSGCRLGDLWVLDIESLTWTKPALSG
TAPVPRSLHSATAINNKMYVFGGWVPLVMDDVQEATHEKEWKCTNTLACLNLDNMCWDTV
LMDVLEESVPRARAGHCSVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPCPPSR
VQLVRANTSSLEVSWGPSQTADMYLLQLQKYDIPATPASSPAPNPVPTATPAVSSPKSPA
PVAVASANQSVTLVPSQILSIPGSPLAAAAKAPAVLKVAAAPGSVGGASIVTVRQATPKS
PVAVTTLPAGVRMVVPAQSGQATPIGSSPQMSGMAALAAAAASTQKIPPSSAAVLNVAAG
AAIVKTVTGSPGSSSLPIKMASPVTMVTSPATRMLKTAAAQVGGASVVSTPGTPSRPVIT
VHKSGTVTVSQQAQVVTTVVGGVTKTFTLVNSPLGVGGGGALINNLGKVLSVVQTKPGTV
TGQAGSSSIAQMIQKGALPAGTILKLVTSADGKQKTILSTVQAGSMATKPNVLGVSPTTA
KPGTTFIKTIPVSALHGGAGGNSPITILTTKGVTPGTMGKIITTVPKITAGGQQGVTQVV
LKGAPGVPGTILRTVPMSGVRLVSPGSKPSVATLVVKTTTAGVSSLGTVTGSVSTTLAGG
AIGSANASLATPITTLTAIATLASQVTTATAAAAIPTQVTLITTPSGAEAQSLVQDLPVS
IMASPTSEEPGSGTSTAMVEETTDTETAVMSICSNPPCETHETGTTNTSTVATATMGGNN
RVCSNPPCETHETGTTNTSTVATATMGGNNRVCSNPPCETHETGTTNTSTVATATMGGNN
RVCSNPPCETHETGTTNTSTVASSSMSQALQVCSNPPCETHETGTTNTATTATAQQGGDV
LQVDSTDPTTSSDPTSSTANRNRAVTMVTQATPTPGPSIPMISSVVKEDRVESSETEAVA
MVTGEEPEPTDSQPAAVTLQVHMEGSKKAAQVATTDLPQELMSSEGDAGEVVPGTTTLML
TTGLTPDQLTAQQATIQAVLQAAGHIGGAANSVDQSVPIILTQQELAALVQQQQQLQDIH
AHPEPQHSSLPTEGLAPADSLNDPAAELTSSAVTSAVARLASTFSPTPPLTSVLAKIQPV
ATVTEATNGITATKEPQGVEVKSSVRNSRWYDVGVVKVTNMVVSHFYIPYDDNMAEDDSG
VVPDYSQMRKVELQPGTAYKFRVAGINICGRGAFSEVSAFKTCLPGFPGAPCAIKISKNL
DGAQLTWEAPAVTWGKITEYSVYLAIQSSHAASSVSGPAQLAFMRVYCGTSPSCLVQASS
LANAHIDYTTKPAVIFRIAARNQKGYGPATQVRWLQENKDTKTTVKRGGTTQLKPVGPKK
FKTDQ
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgaccccgcagtgctacagccccgctggaagcgcgtcgcgggctggaccggc
ccggtgccgcggccccggcacggacaccgagctgtggccatcaaggagctgatggtggtg
ttcggcggagggaacgaggggatcgtggacgagctgcacgtctacaacacagccaccaac
cagtggttcatccctgcggtctgtggtgatgtcccccccggctgtgccgcctatggtttt
gtatgtgacgggaccaggctgttggtgtttggcgggatggtggaatatggtaaatacagc
agtgacctgtacgagctgcaggcgagtcgctgggagtggaaacgtctaaaggccaaagct
ccaaagaacggcccgcccccctgccctcgcctcggacacagcttctctttaattggtagc
cgctgttacctttttggaggcctggctaatgacagcgaggatcccaagaacaacatcccc
aggtatctgaacgacctgtactgtctggagctgcgcccaggatccagcgtggtcggctgg
gaggtcccactgacttcaggtccgccaccgcctcccagagagagtcacacggctgtggtg
acgagcggccgcggagaaaaccgactgatcatctatggagggatgagcggctgcagactg
ggtgacctgtgggtccttgacatagagtctctgacctggaccaaaccagccctcagtggg
accgcccccgtccctcgcagcctccactcggccactgccatcaacaacaagatgtatgta
tttggaggttgggttcctctggtgatggatgatgtccaagaggcgactcatgagaaggag
tggaagtgcaccaacacactggcctgcctcaacctggacaacatgtgttgggacacagtc
ctgatggatgttctggaggagtctgtccccagagctcgagcaggtcattgtagtgtctcc
atcaactccagactctacgtctggagcggcagagacggatacaggaaggcctggaacaat
caggtgtgctgcaaggacctgtggtacctggagacagagcgtccctgtcctccctctcgg
gtgcagctggtccgggccaacacgtcgtctctggaggtgagttggggcccgtctcagacg
gcggacatgtacctgttgcagctgcagaagtacgacattcctgccacacctgcatccagc
cccgcccccaaccccgtgcccacagccacacctgcagtcagctcccccaagagccccgcc
cccgttgcagtggcatcggccaaccagtccgtcacgctggtcccctcccaaatcctctcc
attcctggaagcccattggctgctgctgcgaaagcaccagctgtcctgaaggtggcagca
gctccaggttcagtgggtggagcctccattgtcacagtgagacaggccacacctaaatcc
ccagttgccgtgacaacgcttcctgcaggcgttcgtatggtggtacctgctcaatctgga
caggcgacgccaataggcagcagccctcagatgagtggaatggcggcattggcagcggcg
gcggcatcgactcagaagatccccccatcgtcagcagcggtgctgaatgtcgctgcagga
gccgcgatcgtgaagacggtgaccgggagtccaggatccagcagcctgccaatcaaaatg
gcctctcctgttaccatggtgaccagcccggccactcggatgttaaagaccgctgccgct
caggtgggcggggcctcggttgtctcaactcctggcaccccgagccgaccggtcatcaca
gtccataagtcggggacagtgactgtctcccaacaagctcaggtggtcaccacagtggtg
ggtggagtcacgaagaccttcactctggttaacagtccactcggtgtgggaggaggcggg
gctctgatcaataacctgggaaaggtgttgtcagtggttcagaccaaaccaggaactgtt
actggtcaggctggcagcagctccatcgctcagatgatccagaagggcgctctcccagca
ggaaccatcttgaagttggtgacgtctgcagacggtaaacagaagaccatcctcagcaca
gtgcaggcaggatccatggcaaccaaacccaacgtccttggtgtctccccgacaaccgcc
aaacctggaaccaccttcatcaagaccatcccggtgtctgcgctgcacggcggtgcaggt
ggaaacagtccaatcaccatcctcaccactaagggggtaacgccaggaactatgggtaaa
atcatcaccacagtccccaagatcactgctggaggtcaacagggggtcacacaggtggtg
ttaaagggagctccaggtgtacctggtaccatcctcaggactgttcctatgagcggagtc
agactggtctcacctggatccaaacctagtgtcgccactctggttgtcaagacaaccaca
gcaggtgtgtccagtctggggacagtaacaggaagtgtctccaccacgctggcaggtgga
gccattggttctgccaacgcctccctggctacgcccatcaccaccctgaccgccattgct
acacttgccagccaggttaccacggcaaccgctgctgcagcgatacccacacaggtgact
ctgatcacaactccgagcggagctgaagctcagtcactggtccaggatctgcccgtctcc
atcatggcgtctcctacatcagaagagcccggaagtggtacaagtactgcgatggtagaa
gagactacagacactgagacagcagtgatgtctatctgctccaacccgccgtgtgagact
cacgagacggggacgaccaacacctccactgttgccacagcaaccatgggaggtaacaac
cgagtgtgctccaacccgccgtgtgagactcacgagacggggacgaccaacacctccact
gtcgccacagcaaccatgggaggtaacaaccgagtgtgctccaacccgccgtgtgagact
cacgagacggggacgaccaacacctccactgtcgccacagcaaccatgggaggtaacaac
cgagtgtgctccaacccgccgtgtgagactcacgagacggggacgaccaacacctccact
gtcgcctcctccagcatgagccaagcactacaggtttgttcaaatcctccatgtgagact
cacgagaccggaaccaccaacacagcgaccacagcaacagctcaacagggcggagacgtt
cttcaagtagactccacagaccccaccacctcttctgaccccacctcctccacagccaat
cggaacagagctgttaccatggttacacaggcaacgcctacacccggaccatccatacct
atgatctcctctgtggtcaaagaagacagggttgagtcctcagagacagaggctgtcgcc
atggttacaggggaggaacctgagccgacagatagccaaccagcggctgtaactttacag
gttcacatggagggcagcaagaaagctgcacaggtggcgaccacagatcttcctcaggag
ctgatgtcatcagaaggggacgcaggtgaggtggtccctgggaccactaccttgatgttg
acaacaggactgaccccagatcagctgactgctcagcaggcaacaatacaggcagtactg
caggcagccggacacataggtggagctgcgaactccgtggatcaatctgtccccatcatt
ttgactcagcaggaactggcagctctggttcaacaacagcagcaactacaggacatccac
gcccacccagagccacagcacagcagcctgcccacagagggccttgctccagcagacagc
ctcaatgacccggcagcagagctgacctcatcagcagtaaccagcgctgtcgccagatta
gccagcacgttcagccccacccctcctctgacatcagttctggcaaagattcaacctgtt
gccacagtgactgaggcgaccaatggcatcacagcgaccaaagagccgcagggtgttgag
gtgaagtcttcggtgaggaacagtcgatggtacgatgttggcgtcgttaaggttacaaac
atggtggtctctcacttctacatcccatatgacgacaacatggccgaagacgactcaggt
gtggtacctgactacagtcagatgaggaaggtggagctgcagccggggacagcctataag
tttcgtgttgctgggatcaatatctgtggccgtggagcgttctctgaggtgtctgcattt
aaaacatgtctgcctggtttccccggagcgccatgtgccatcaagatcagcaagaacctg
gacggggctcagctcacctgggaggctccggctgtcacgtggggcaagatcacggagtac
tcggtgtacctcgccatccagtccagccatgccgcctcctccgtttcaggcccggcacag
ctggccttcatgagggtgtactgtggtaccagcccgtcctgcctggtccaggcctcaagc
ctcgccaacgcacacatcgactacaccaccaagccagccgtcatcttccgcatcgcggct
cgcaaccagaagggctatgggccggccacccaggtcaggtggttacaagaaaataaagac
acaaaaacaacagtgaagagaggaggaactacacaactgaaacccgtcggaccaaagaaa
ttcaaaacggaccaatag
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