Hippoglossus hippoglossus (Atlantic halibut): 117765285
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Entry
117765285 CDS
T07778
Symbol
sorcs3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117765285 (sorcs3)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Others
Others
117765285 (sorcs3)
Endosome - Lysosome transport
117765285 (sorcs3)
Endosome - Golgi transport
117765285 (sorcs3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PH_LRR1
Motif
Other DBs
NCBI-GeneID:
117765285
NCBI-ProteinID:
XP_034447601
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Position
1:complement(2547662..2755362)
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AA seq
1242 aa
AA seq
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METWAGFCPGLHLSLGIWVMIAALTLQNAKAEITCASCPSPVQLHLEKLQTGMRTDPTEE
PSDLELKELGVSGQNAGVDDDHETDISVEDVPMFPQHVSLDGVRTKGETPGHSGESHRGR
VNDREPELGEDAALRRARRSGPEFAEFSESRWTGRTGVDAGAPEDRGSLFDGQKQGRSDF
GWNRNDGRGNTRQDEPKITSSTFALTGDSAHNHAVVYWSGQNSSVILILTKLYDFHIGSV
TESTLWRSTDYGSTYERMNDKVGSKIVLSYLYVCPTNKRKIMVLTDPEFESSVLISSDEG
ASYQKYRLTFYVLSLLFHPTEEDWALAYSHDQKLYSSMDFGRKWQLIHERVTPNRFYWSV
SGLDKEPDLVHMEAHTPDGNVQYVTCRAQMCTDANRNYPFLEYIDISSLVVQDDYIFIQV
PTSGRANYYVSYKRDSFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYNLYLSD
TRGIYFTLAMENVKTTKGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYITYNKGRDWR
LLQAPAADLDGNDIHCILPFCSLHLQLQTSENPYLSGTISTKNSAPGIIVAAGNIGAELS
YNNVGMFVSSDAGNSWRQIFEEEHNVWFMDRGGALVAVKQPSVPTRHLWVSFDEGRQWTQ
HSFSSVPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSKKCTEEDYQTWH
LHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERRGDGN
CRPAFWFNPSTVSRSCSQGQNYFNSTGQDVEYSMYRKVVLNNCTKGVKEMYTARKQQCPN
RPPKGLLVTTKDGKLTANLGTNITFLVHLDEGDSLRTNIQLDFGDGTAVSYSNLSWTEEG
IKHVYKSAGIFRVTGLAENTLGLDTTTLFLHITCPVEHVQLLAPFVVIRNKEVNITAVVL
PSHPRTVTYFWWLGNNTEPVITLDGSISYTFTNEGMHTITVQVAAANTILQDTKTIAVKE
FFKSLLLSFSPNLDEFNPDIHEWRQDVGRVIKKALLQVSDFPEEQLLVAVFPGVPTAAEL
FLLPHKNQSEGKKKSEDELEQASDIIVSALNQNLVEFELKPGVRVIVYNTQLTLAPLVDS
SPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTP
KITLSEFPTSKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttctgcccaggattgcacttatctctaggtatctgggtgatg
atagccgctcttaccctgcaaaatgccaaagcggagataacttgcgcatcttgcccgtcg
ccagttcaacttcacctggagaaattacagacgggaatgcgcactgacccgacagaggag
ccgagcgacttagagttgaaggaactcggggtttccggacaaaatgctggagtggacgac
gaccatgagacagacatttctgtcgaggatgtccccatgttcccccaacatgtcagtttg
gatggagtaagaacaaagggagaaacaccagggcatagtggagaaagtcatcgcggcagg
gttaatgacagggagcccgagttgggtgaggatgctgcgctccggagagcgaggagaagc
ggtcctgagtttgccgagttcagtgagagcaggtggaccggccggaccggcgtggacgcg
ggcgcaccggaggatcgaggctcgttgtttgacggacagaagcagggcaggtccgacttc
ggctggaacaggaacgacgggagaggaaatacccggcaggatgagcccaagatcaccagc
agcactttcgctctgacgggagactctgcgcacaaccacgcggtggtttactggtcagga
cagaacagcagcgtgatcctgattctaacgaagctgtatgactttcatattggcagcgtc
actgagagcactctttggagatccactgactatggctccacatatgaacgaatgaacgac
aaagtcggatccaagattgtcctgagttacctctacgtctgtccaactaacaagaggaag
attatggtgttgacagatccggagtttgagagcagcgtactcatcagctctgatgaggga
gccagctaccagaagtaccgtctcacgttctacgtcctcagccttttattccaccccact
gaagaggactgggccttggcctacagtcacgaccagaagttatacagctcgatggacttt
ggaagaaaatggcagctcatccacgaacgcgtaacgccaaacagattctactggtctgtc
tcgggcctagacaaggagccagatctggtccacatggaggctcacacaccagatggaaat
gtgcagtatgtcacatgcagagctcagatgtgcacggacgccaacaggaactacccgttc
ctcgaatacatcgacatcagctctttggtggtccaggacgactacatattcatacaggtt
cctacatcgggtcgagccaactattatgtgtcctacaagagagactcgtttatacaaata
aaactgccaaaatattccctgcctaaggatttacacattgtcagcactgatgagaagcag
gtatttgcggcggtgcaggagtggaaccagaacgacacctacaacctctacctgtcggac
accagagggatctacttcaccttggccatggaaaatgttaagaccactaagggtatcgga
gggaaccagatgctagacctgtatgaggtggcaggaattaaaggcatgctaattgctaac
aagaggcaagacaaccaggtgaagacctacatcacctacaacaagggcagggactggagg
ctgctgcaggcccctgctgctgacctagatggaaacgacatccactgtattctgcctttc
tgttcacttcatctacagctgcaaacgtcagaaaacccttacttgtcaggaaccatctcc
actaagaactcggcaccagggatcatagttgccgcaggaaatatcggagccgagctgtct
tacaacaacgttggcatgttcgtatcatctgatgctggcaatagctggagacagattttt
gaagaggagcacaacgtgtggttcatggatagaggaggggcccttgtcgctgtgaaacag
ccctccgtgccaaccagacacttgtgggtcagctttgacgaggggcggcagtggacccaa
catagcttctcctcggtgccgctgtttgtggatggagtcttggtggaggctggggccgag
aaccaaatcatgactttttttggacacttcagccaccgttctgaatggcagctcatcaag
atagactacaagtccatcttcagcaagaaatgcacggaggaggactatcagacttggcac
ctgcacaaccagggtgagccatgtgtgatgggacaaaaacagatttacatgaagcgcagg
cctggaaactactgcatgctgggaaaagactactccaggatcctctcagctgagtcctgt
atttgccgagctcacgattttgaatgtgactatggatacgagcggcgcggggatgggaac
tgccggcctgcattctggttcaatccctctactgtgtccagaagttgcagccagggccaa
aactacttcaacagcacaggacaagatgttgaatattccatgtatcgtaaggtggtgttg
aacaactgcactaaaggagtgaaggaaatgtacacagcaagaaagcagcagtgtccaaac
cgacctcctaaaggattgctggtgaccaccaaagacggcaaactcacggccaacctgggc
accaacatcaccttcctggtgcatctggatgagggggattctttacggaccaacatccag
ctggatttcggtgacggcacagccgtgtcctattccaacctcagctggaccgaggaggga
atcaagcacgtctacaagtctgctggaatattccgtgtcacagggctggcagagaacacg
ctgggtttggacaccacgacgctcttcctgcatatcacatgtccagtggaacatgttcaa
ctccttgctccctttgtggtcatacgaaacaaggaagtgaacatcacagccgtggtgtta
cccagtcacccacgtaccgtcacctacttctggtggctgggcaacaatacggagccagtg
ataacgttagacgggagtatctcatacaccttcacgaatgagggaatgcacaccatcaca
gtccaagtggctgcagccaacaccatcctgcaggataccaagaccatagcagtcaaagaa
ttcttcaaatctctacttttatctttctcacctaatctggacgagttcaaccctgacata
catgagtggagacaggatgtggggagagtaattaagaaggctctgcttcaagtgtccgac
ttcccggaggagcagctcttggtagccgtgttcccgggagttccaacagctgccgagctc
ttcctgttacctcacaagaaccaatcagagggcaagaaaaagagcgaggacgagctggag
caggcatctgatattattgtaagtgcactgaaccaaaacttggtggagttcgagctcaag
cctggagtgagggtgattgtgtacaacacacagttaacgctggcccccttggtggactcc
agccccagacacagcagctcggctatgctcatgctcctatcggtcgtgttcctgggccta
gcagtgttcctcatctacaaattcaagagaaaaataccttggatcaacatatatgctgag
gtgaaccaggagaaggagcaggagatgattggttcggtgggccagggcgacagcacgcca
aaaatcaccctgagtgagttccccacttccaaagaactcatggaaaaggaactggatgcc
agggtcaaaaggggagttggaaacgcctgcgagagcacaagggagattccaaactgtacg
agcgtgtaa
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