Hippoglossus hippoglossus (Atlantic halibut): 117765379
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Entry
117765379 CDS
T07778
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117765379 (apex2)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117765379 (apex2)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117765379 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
117765379
NCBI-ProteinID:
XP_034447820
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Position
7:22986807..22990863
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AA seq
582 aa
AA seq
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MKIVTWNINGIRTFRGGIKQALDSLDADIICVQETKVTRDLLDERSAIVDGYNSYFSYSR
GRSGYSGVATYCKDSATPIAAEEGLTGLLTSHEGAVGCYGDHAEFSTEELQLLDNEGRAI
ITQHRIMCQDKVQTVTVINVYCPRADPEKPERKLFKLQFYKLLQCRAEAVLKDGSHVIVL
GDVNTSHRQIDHCDPCDIEDFGENPGRKWLNGFLHGGKQEEDRNEEELDEESEVTPTDPV
HGGKFVDTFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLAKEQFATADIMPE
VEGSDHCPVWGQLSCPLLPNSKPPPLCTRYLPEFAGKQQKLSRFLVKVDPKSAQSEQRDV
LPGSQEEGEKMENLNPLGAGNVSGKKRGLTSDSVVPRGKKTKTVKTNSKPQGSLLSFFKP
KPTNVVPPAEAPLRQCETPLSLDNTSTQTSQKESTTRENVSSVTGRVPEDTDTVNNHSPQ
TCTSSTAEKCNKQVKTKHSTTQPTVGHSGANKGASSVFWKSVLHGPPPPPSCKVHGEPCV
LRTVKKEGPNMGKQFFVCARPQGHASNQEARCNFFAWVDKGK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtcacctggaatataaacgggatccggactttcagaggcggaatcaaacag
gctctggattctctggacgcagatatcatctgtgtgcaggagaccaaagtgacaagagac
ctgctggatgagaggagcgccatcgtggacggctacaactcatatttcagctacagtcga
ggacgcagcggatattcaggcgttgccacttattgtaaggacagtgccactcccatcgct
gctgaggagggtctcactggtctgctcaccagccacgaaggggcagtgggatgctacggt
gaccacgctgaattttcaaccgaggagctgcagctgttggacaatgaaggacgagccatc
atcacacagcaccgaatcatgtgtcaggacaaagtgcaaactgttactgtcatcaacgtg
tactgtccacgggctgatcctgaaaagccggagcgaaaactgttcaaactgcagttctac
aagctgcttcagtgtcgggctgaagctgtactgaaagatggcagccacgtgattgtttta
ggagatgtaaatacatctcaccgacagatagaccactgtgatccctgcgatattgaggat
tttggtgaaaatcctggcaggaaatggctgaatggtttcctgcacggtggcaaacaagag
gaagacaggaacgaggaggaactcgatgaagaatctgaggtaactccgacagatcccgtc
cacggagggaaatttgtggatacgtttcgctatttccacccaactcgaacaaacgccttc
acgtgctggtccacactcactggagcgcggcagacaaactatggcacccgcattgattat
atattcgctgattgccagctcgccaaggagcagtttgcgacggcggacatcatgccagag
gtggaggggtcagaccactgccctgtgtgggggcaactgagctgccctctcttgcccaac
tctaagcctcctcccctttgtactcgctacctgccagagtttgctggcaagcagcagaaa
ctctcacgcttccttgttaaggttgatccaaagtcagctcagtctgagcagagggatgtt
ttacctggatctcaggaggagggagaaaagatggagaatttaaacccactgggagctgga
aatgtctctggtaaaaagcggggattaacatcagattctgttgtcccaagagggaaaaag
acaaagacagtaaagactaattcaaagccacaaggcagcctcctttcctttttcaaacct
aaacccacaaatgttgttccccctgctgaagcccctttgagacagtgtgaaacacctctc
agcctggataacacctcaacacaaacctcacaaaaagagtccacaacgagagaaaatgtt
tcctcagtcacaggcagagttcctgaagatacagatacggtgaataatcattccccacag
acatgcaccagcagcaccgcagagaaatgtaacaaacaggtgaagacaaaacattcaacc
acacaacccactgtgggacactcgggtgccaacaaaggagcatcatctgtgttttggaag
tcagttcttcacggaccacctccaccgccctcctgtaaggtccacggggaaccctgtgtg
ctgcgtactgtaaagaaggaggggccaaacatgggtaaacagttcttcgtgtgtgcacgt
cctcagggccatgcctccaatcaggaggctcgatgtaatttctttgcgtgggttgacaag
ggaaagtaa
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