Hippoglossus hippoglossus (Atlantic halibut): 117765670
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Entry
117765670 CDS
T07778
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00310
Lysine degradation
hhip00514
Other types of O-glycan biosynthesis
hhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117765670 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117765670 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hhip01003
]
117765670 (colgalt1b)
Enzymes [BR:
hhip01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117765670 (colgalt1b)
Glycosyltransferases [BR:
hhip01003
]
O-Glycan biosynthesis
O-linked Gal type
117765670 (colgalt1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117765670
NCBI-ProteinID:
XP_034447955
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All DBs
Position
1:complement(10218695..10233719)
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AA seq
609 aa
AA seq
DB search
MPRVTSLLPALLFVLLPGPSRGYFPEERWSPESPLLAPRVVIALVCRNSAHSLPLVLGAV
ERLNYPKDRIALWVATDHNIDNTTAILRDWLIKVQNYYHYVEWRPEDEPSAFEDEVGPKH
WNNLRYEHVMKLRQAGLDTAREIWADYFLVADCDNLLTNQDVLWKMMMENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRKQERRGCFDVPMVHSTYLVDLRKEASRQLAFYP
PHPEYSWALDDVIVFAFSARMADVQMYVCNKETYGYFPVPVRSLATLQDEAESFLHTQLE
VMVKNPPLEHSSFLSLPPKQPNKMDFDEVFMINLVQRSDRRERMLRTLYEQELSCKVVAA
VDGKALNLSEIESMGIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIVDRGLQTSLVI
EDDLRFEVFFKRRLQTLLEEVTTHKLDWDLIYIGRKRMQVDHSEKSVPNIHNLVEADYSY
WTLGYLLSLQGAQKLLMADPLTKMLPVDEFLPVMYDKHPVSEYMGHFESRDLHAFSAEPL
LVYPTHYTGEPGYISDTETSVVWDNETVTTDWDRAKSRKTQEQEELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggtcacctcgctgctgcccgccctgctgttcgttctcctgccgggcccgagc
cggggatatttccccgaggagcgctggagccccgagtccccgctcctcgctccccgggtc
gtcatcgcgctcgtgtgccgcaactcggcgcactccctgccgctggtcctcggtgccgtc
gagcgcctcaactacccgaaggaccgcattgcgctgtgggtggcgacagatcacaacata
gataacaccacagccatcctgagagactggctcatcaaggtgcagaattactatcactat
gtggagtggagacctgaagatgaacccagtgcctttgaggatgaggtggggcctaagcac
tggaataatctccgctatgaacatgtgatgaagctccgtcaggccgggctggacaccgcc
cgcgagatctgggccgactacttcctggttgctgactgtgacaacctgctcaccaatcag
gatgtgttgtggaaaatgatgatggagaacaagaccattgtggctcccatgttggagtcc
agagctgcctactccaacttctggtgcggcatgacttcacagggttactacaagcgtaca
ccggcctacatgccgatccgtaagcaggagcgtcgcggctgtttcgatgtgccgatggtc
cactctacctacctggtggacctccggaaagaggcctcccgtcagctggcgttttacccg
ccgcacccggagtacagctgggccctcgatgatgtcatcgtctttgccttctcagctcgc
atggcggatgtgcagatgtatgtgtgcaacaaagaaacatatgggtacttcccggtgccg
gtgcgctcccttgcgaccctgcaggacgaggcggagagcttcttgcacacgcagctcgag
gtcatggtgaaaaatcctccactggagcactccagcttcctgtctcttcctcccaagcag
cctaacaagatggactttgatgaggtgttcatgataaatctggtgcagagatctgaccgt
cgtgagcgcatgctaagaactctgtacgagcaggagctcagctgtaaggttgtcgctgct
gtggatggcaaagctctgaacttgtcggagatcgagtctatggggattaagatgcttcca
ggctataaagacccttatcatggtcgacctctcaccaagggtgaactgggttgtttcctc
tctcactacaacatctggaaagagatcgtggaccgtggcctgcagacttccctggtcatc
gaggacgacctccgcttcgaggtattcttcaaacgtcgtctccagactctcctggaggag
gtgacgacacacaagctggactgggatctcatttacatcggacggaagcgcatgcaggtg
gaccattcggagaagtctgtacccaacatacacaatctggtggaggctgactactcctac
tggacgctcggttacctgttgtcattacaaggagctcagaagctcctcatggccgatcct
ctgaccaagatgctccctgtcgatgagttcctccctgtcatgtatgacaaacatccagtt
tcagagtacatgggacactttgagagtcgggacctgcacgccttttctgccgagcctctc
ctggtctatccgacccactacactggagaacctggctacatcagcgacacggaaacttct
gtggtttgggacaacgaaacggtcacaactgactgggatcgagccaagtcgaggaaaact
caggagcaggaggagctgagcttcgaggcccagaactctgacgtgctgcagtcagaactg
gagaactggagcgcacgggacgagctgtga
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