Hippoglossus hippoglossus (Atlantic halibut): 117765846
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Entry
117765846 CDS
T07778
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117765846 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
hhip04031
]
117765846 (rab40c)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
117765846 (rab40c)
GTP-binding proteins [BR:
hhip04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
117765846 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117765846
NCBI-ProteinID:
XP_034448273
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Position
8:complement(4081148..4102127)
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AA seq
279 aa
AA seq
DB search
MGSQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANPSGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccagggcagcccggtgaaaagctacgactaccttctgaagttcctcctggtt
ggagacagcgatgttggaaaaggcgagatcctggacagcctgcaagacggatcggccgag
tccccatatgcttatagcagcggtatcgattataaaaccaccaccattctcctggacggg
agaagagtgaagctggagctctgggacacctcaggacaggggaggttctgcaccattttc
cgctcttattcccgcggggctcaggggatcctgctggtgtatgacattaccaaccggtgg
tcatttgatggcatcgacaggtggatcagagagattgatgagcatgcaccaggcgtgcct
cgaatcctcgtaggcaaccggctacatctggccttcaaacggcaagttcccactgagcag
gccagggcatatgccgagaagaacggcatgacgttcttcgaggtgagccctctgtgcaac
ttcaacgtcatcgagtccttcacagagctatctcgtatcgtcctgatgaggcatggcatg
gagaagttctggaggcccaacagagtcttcagcctccaggacctctgctgccgagccatt
gtgtcatgcaccccagtccacctcatcgacaagctcccgctgcctgttgccattaagtcc
cacctcaaatccttctccatggccaatggcatgaacgccgtcatgatgcatggacgctct
tactccctggccaacccatccggtggctctaaaggcaacagcctgaagcgctccaagtcc
atccgtccaccgcagagccctccgcagaactgcacccgcaacaactgtaaaatctcctaa
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