Hippoglossus hippoglossus (Atlantic halibut): 117765902
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Entry
117765902 CDS
T07778
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04137
Mitophagy - animal
hhip04144
Endocytosis
hhip04145
Phagosome
hhip04148
Efferocytosis
hhip05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117765902 (rab5c)
04145 Phagosome
117765902 (rab5c)
04137 Mitophagy - animal
117765902 (rab5c)
04148 Efferocytosis
117765902 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117765902 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117765902 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117765902 (rab5c)
04031 GTP-binding proteins [BR:
hhip04031
]
117765902 (rab5c)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117765902 (rab5c)
Endosome - Lysosome transport
117765902 (rab5c)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117765902 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
117765902 (rab5c)
Exosomal proteins of colorectal cancer cells
117765902 (rab5c)
Exosomal proteins of bladder cancer cells
117765902 (rab5c)
GTP-binding proteins [BR:
hhip04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117765902 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
BrnT_toxin
Motif
Other DBs
NCBI-GeneID:
117765902
NCBI-ProteinID:
XP_034448388
LinkDB
All DBs
Position
8:8628599..8639166
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGQARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGAAGAGGRTRGGVDLQEAAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggagaggcggacaagcacggaccaacggtaccgcggcaagcaacaagatctgc
cagtttaagctcgtgcttttgggggagtcggcggtgggaaagtccagcttggtgcttcgc
ttcgtcaaaggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgacacaacagtcaagtttgagatctgggacactgcaggacag
gaacggtatcacagcttggcacctatgtactacaggggagcccaggccgccatcgtggtc
tacgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccag
cgacaagccagcccgaatattgttattgcactggcagggaacaaagcagacctggccaac
aagagggctgtagatttccaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggagacgtcagccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagcttcctaagaacgagcctcagggtgcagcgggcgccggtggacgaaccagaggcggc
gttgacttgcaggaagctgccccacagggcagaagtggccagtgctgtggcggcgggaac
taa
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