Hippoglossus hippoglossus (Atlantic halibut): 117765987
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Entry
117765987 CDS
T07778
Symbol
srsf2b
Name
(RefSeq) serine/arginine-rich splicing factor 2b isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117765987 (srsf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117765987 (srsf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117765987 (srsf2b)
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
SR proteins
117765987 (srsf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
117765987
NCBI-ProteinID:
XP_034448547
LinkDB
All DBs
Position
8:complement(22650908..22654687)
Genome browser
AA seq
232 aa
AA seq
DB search
MSYGRPPPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHNGGGGGGGGGGGGGGGGGGGG
RRGGAPRRSGGYGRRSRSSSRSPRHKRRSRSRSRSRSRSRSRSRSSRSRSYSRSKSHSPR
TKTPKPKSHSRSRSKSKSKSRSRSHTPASKRESRSRSKSQPKSAAENGGETP
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggaaggcctccgccggacgtcgacggcatgacttcgctcaaagtggacaac
ctgacgtaccggacctccccagaaaccctccgacgggtgttcgagaagtacggccgggtc
ggagacgtgtacatcccccgggatcgatacacgaaggagagccgcggcttcgccttcgtg
cgttttcacgacaaacgcgacgccgaggacgcgatggacgccatggacggcgcgctcctg
gacggacgggagctccgggttcagatggcccggtacggcagacccccggactcccacaac
ggaggcggtggaggcggcggcggcggtggcggcggaggaggtggaggtggaggaggagga
cggcgaggaggagcgccccggaggagcggaggttatggccgccgaagcagaagctcttcc
cgcagcccgagacacaagagacgcagcaggtcccgcagcaggagccgctctcgttcccgc
agccgatcccgctccagcagatcccgctcctactccagatccaagtcccactctcccagg
accaagacccccaagcccaagtcccattctcgctccagatcaaaatccaagtcaaagtcc
aggtccagaagccatacccctgcctccaaaagagagtctaggtccaggtctaaaagccag
cccaagtccgcagcagaaaacggaggtgaaaccccgtag
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