Hippoglossus hippoglossus (Atlantic halibut): 117766007
Help
Entry
117766007 CDS
T07778
Name
(RefSeq) caskin-2-like isoform X1
KO
K21952
CASK-interacting protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117766007
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
117766007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Caskin-Pro-rich
SAM_1
Ank_4
Caskin-tail
Ank_5
SAM_2
Ank_3
Caskin1-CID
Ank_KRIT1
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
117766007
NCBI-ProteinID:
XP_034448578
LinkDB
All DBs
Position
8:complement(22931229..22982509)
Genome browser
AA seq
1334 aa
AA seq
DB search
MGKEQDLLQAVKSGDLTSTQKLLSKLKSNRNKLLGSTKRLNVNYQDSDGFSALHHAALTG
TSELLSALLEAQASVDVKDSNGMRPLHYAAWQGKAESVLMLLRSGASVNGVSLDGHIPLH
LAAQYGHDEVSEMLLQHQSNPCLVNKAKKTPLDLACEFGRVKVAQLLLSSNMVVALLEGE
RKEPTDSAFTTPLHLAARNGHKDIIRLLLQAGIDINKTTKSGTALHEASLYGKTEVVRLL
LDAGVDVNIRNTYNQTALDIVNQFTTSHASKDIKQLLRDATGVLQVRALKDYWNLHDPTA
LNIRAGDIIMVMEQHVDGRWKGHIHDSPRGTDRVGFFPPSIVEVISRRNGGTLSRHASLP
TQRQQSLSRAPLSSSLSSAPQTDDSYTLYAPPTHVVLPLANGLTTSTGLSPSRLSQSGCP
FEDIWVLRDSCHAGDRNSVGSTGSVGSTRSAGSGQSTESNHAPNGFPHHSGHHDNNANKT
APPAADSGHSDLSDQPDLPAGGTPRRQTVTVQKPAEQSFSQQFVRPQQLLEGKDAEAIYQ
WLSEFQLQHYTGNFLSAGYDVPTISRMTPEDLTAIGVTKPGHRKKVSMEINTMNIPEWLP
EYIPSDLGEWLSAIGLPQYHKKLSENGYDCISIVKDLTWEDLQEIGIIKLGHQKKLMLAV
KKLCDIQRAILHAESGHDTLRRRGPGALHLVAIEPADSDSSPHTPKMLTFQDSELSAELQ
TAMSSHYGGCEEGLAFKNAVGMSLSQESIDTRSRGSGRSQEPPTASITPHSWSQESLDDG
SAKERNLPEGWDQRPKQVPLGTATVFKYPAIPAKPRLSGSRGPSPHGSPALKGFSYLHSH
CGSTELSSSHRPARHTATLAPPKRRTQSMTRYALSDGEPDDDDEEPAVHSGNLPSYATLT
RKPGRSQLARLQTSPEKGGSVGRSQSFAVRARKKGPPPPPPKRLSSVSSTTSGELSDSST
SSSSGRVVTDSPGSVRSIADALEGSVEGRSSPGPTPELGHQEAPSPSLISAGQEVREAPG
VRRRVQSECLPAHSGAEPDRGVKSDSEEDGPKGLESSSSPQNSSSECLPFAEEGNLTIKQ
RPKAPGPPRAEAVLEPPDKHAAKSLEVPEFNLKESDTVKRRQKPRDKEQGGGSPSREEAG
QPGSPAGSRPQSREGVALRISDTGVERPASPATGSQIKPPLSPKPPTVAPKPVRHSLLAA
QAAGPSTPALTVSVVQSLAFTSSSSPLHGPPALAPTSSSAPAPQSPSLTAARPQVCVVGP
DLVPEPSCGTEVVQQRLDQTSTSLEAALKAVERKLNLDDNSDGGANSVKSAGTILDDIGN
MFDDLADQLDAMLD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagcaggacctgctgcaggcggtgaagagcggagacctgacgtccacccag
aagctgctgtccaaactgaagagcaacagaaacaagctgctgggctccaccaagagactg
aatgtgaactaccaggactccgacgggttttccgccctgcaccacgctgctctcactggg
acgtccgagctgctgtctgctctgctggaggctcaggccagcgtcgacgtcaaggacagc
aacggaatgcgtccgctgcattatgcagcgtggcaggggaaagccgagtccgtcctgatg
ctgcttcgctccggagcctcggtcaacggcgtctccctggacggacacatcccgctccac
ctggctgctcagtacggacacgatgaagtgtctgagatgctgctgcagcatcagtcgaac
ccgtgtctggtcaacaaggccaagaagacgcctctggacctggcctgtgagttcggacga
gtcaaggtggcccagctgcttctgagcagtaacatggtggtggcgttgttggaaggagag
aggaaggagccgacagactcggccttcacaacgccactgcacctcgccgcccgaaatggt
cataaagacatcatacggctgttgctgcaggccggtatcgacatcaataaaaccaccaag
tccggtacggcgttgcacgaagcttctctctacggtaaaacggaggtggtgcgcctgctg
ctggatgccggagtggacgtcaacatccgaaacacctacaaccagacggcgctggacatc
gtcaatcagttcaccacctcacacgccagcaaggacatcaagcagctgctccgagatgcg
acgggggttctgcaggtcagggccctgaaggattactggaacctccacgatcccaccgcc
ctcaacatccgagccggtgacatcatcatggtgatggagcagcacgtggacggacgctgg
aaaggccacatccacgacagcccgagagggacggaccgagtcggcttcttccccccgtcc
atcgtggaggtcatcagccggaggaacgggggcaccctgtcccggcacgcctctctgccc
acccagcgccagcagtcgctgtccagagcccccctctcctccagcctcagctccgccccg
cagaccgacgactcctacactctgtacgcaccccccacccatgtggtgctgccgctcgcc
aacggcctcactaccagcacaggtttgtctccgagccgcctgtctcagtctgggtgtccc
ttcgaggacatctgggtcctcagagactcgtgtcatgcaggcgacagaaacagcgttggg
agcacaggcagcgtgggcagcacccgcagcgccgggagtggacagagcaccgagagcaac
cacgcccccaacggtttcccccaccacagcggtcaccatgacaacaacgccaacaagaca
gcgccccctgctgctgattctgggcactcagatctcagcgaccagcccgatctccctgca
ggtggaactcctcggagacagacggtgacggtgcagaaacccgcggagcagagcttctct
cagcagtttgttcgccctcagcagctgctggaggggaaggacgctgaggccatttaccag
tggctgagtgagttccagctgcagcactacactgggaacttcctcagtgctggttatgat
gtacccaccatcagcaggatgactcctgaggatctgacggccatcggagtgaccaaacca
ggccaccgcaagaaagtctccatggagatcaacaccatgaacatccccgagtggctgcct
gagtacatcccatcggacctgggcgagtggctcagcgccatcggactccctcagtaccac
aagaaactttctgagaacggctacgactgcatcagcatcgtcaaagacctgacctgggag
gatctgcaggagatcggcatcatcaagctcggacaccagaagaagctaatgctggcggtc
aagaagctttgtgacatccagagggcgatcctccacgctgaatctggccatgacacgctg
cgacgcagaggccccggagcgctgcacctggtcgccatcgaaccggccgactcagactcc
tcccctcacaccccaaagatgctgaccttccaggacagcgagctgagcgccgagctacag
acggccatgtccagccattacggcggctgcgaggaaggtttggccttcaagaacgccgtg
ggaatgtccctgagccaggagagcatcgacacccgttccagaggctccggccgctcccag
gaacctcccacagcctccatcaccccccacagctggtcgcaggagagcctggacgacggc
tcggccaaggagaggaacctccctgagggctgggaccagaggcccaagcaggttcctctg
ggcacggccacagtgttcaagtaccccgccatcccggccaagccccgactgtcgggatct
cgtggcccctcccctcatggctcgccagcactgaagggtttcagttaccttcattctcac
tgtggctccacagaactgagctcctctcaccgccctgcgcgccacaccgccaccctggct
ccgcccaagagacgcacccagagcatgacccgctacgctctgtcagacggcgagcctgat
gacgacgatgaggagcccgcagtccactcaggaaacctgccgtcctacgccacattaacc
cgcaagccggggcgcagccagctggctcgattgcagacgagtccagagaagggcggcagc
gtggggcgcagtcagtcattcgctgtgcgcgcccggaaaaaaggtccccctccacccccc
ccgaaacgactgagttcagtcagcagcacgaccagcggcgagctgagcgacagcagcacg
tcttcgtcttcaggccgggtggtgacggacagtccgggcagcgtgaggagcatcgctgat
gctctggaaggaagcgtagaggggaggagctccccaggacccacaccagagctcggccac
caggaggcgccctccccctccctcatctctgcgggacaggaagtgagagaggctccaggg
gtgaggaggagggtgcagagcgagtgcctccccgcccacagcggcgccgagcccgaccgg
ggagtgaagtcggactcggaggaggacggaccaaaaggcctggagagctcctcgtcgcct
cagaacagctccagcgagtgcctccccttcgcagaggagggaaacctgaccatcaaacag
aggcccaaagccccggggcccccgagggccgaggccgtgctggagccgccggacaaacac
gcagccaagagcctggaggtgcccgagttcaacctgaaggagtcggacacggtgaaacgc
cgacagaaacccagagacaaggagcagggaggaggctcccccagccgggaggaggcgggg
cagccgggctcgccggccggcagcaggcctcagagccgagagggcgtcgccctgaggatc
agtgacacgggtgtagagcggccggccagtccggctacagggtcacagatcaaaccccca
ctctcccccaaaccccccactgtcgcccccaaacctgtacgtcacagtctgctggctgca
caagcagctggaccctcgactccagctctcaccgtcagtgtggttcagagtttggccttc
acctcttcgtcctctccgctccacgggcccccggctctggccccgacctcgtcttcagcc
ccggcccctcagagtccatctctgacagcggcgaggcctcaggtgtgtgtggtcggtccg
gacctggtcccggagccgtcctgtgggactgaggtggttcagcagagactggatcaaacc
agcacgtctctggaagcagctctgaaggctgtggagagaaaactgaacctggacgacaac
tcagacggcggagcaaactctgtgaagtctgcaggaaccatcctggacgacatcggaaac
atgttcgacgacctggccgaccagctggacgccatgttggactga
DBGET
integrated database retrieval system