Hippoglossus hippoglossus (Atlantic halibut): 117766170
Help
Entry
117766170 CDS
T07778
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04080
Neuroactive ligand-receptor interaction
hhip04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117766170
04081 Hormone signaling
117766170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117766170
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hhip03310
]
117766170
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117766170
Nuclear receptors [BR:
hhip03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
117766170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117766170
NCBI-ProteinID:
XP_034448838
LinkDB
All DBs
Position
8:complement(22222380..22286107)
Genome browser
AA seq
416 aa
AA seq
DB search
MEPMSNKQDSNSSEGDEKGWPDVPKRKRKNSQCSMKSMSALSVSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYEGCCIIDKITRNQCQLCRFKK
CISVGMAMDLVLDDSKRVAKRRLIEENREKRKREEMVRTLQVRPEPDTAEWELIRMATDA
HRHTNAQGSSWKQKRKFLSDDIGQGPMVPTSDGDKVDLEAFSEFTKIMTPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDTEVALMQAVLLMSSDRSGLTSLEKIEQCQEAYLLAFEHYIN
YRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPSELFPPLFLEVFEDQEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatgtccaacaagcaggatagcaactcgtcagagggggacgagaaagggtgg
ccagatgtgccaaagagaaagaggaagaacagccagtgttcgatgaagagtatgtctgct
cttagcgtctctgttccaggatacatccccagctacctggagaaggacgagccgtgtgtg
gtgtgcggggacaaggcgacgggctaccactaccgctgcatcacctgcgagggctgcaag
ggtttcttccgcagaaccatccagaaaaacctccacccggcctactcctgtaaatatgaa
ggctgctgcattattgacaagatcacccgcaaccagtgtcagctgtgccgcttcaagaag
tgcatctccgtgggcatggccatggacttggtgctggacgattcgaagcgcgtggccaag
cggcgtctgatcgaggagaatcgggagaagaggaagcgggaggagatggtgcggacgctg
caggtacgaccggagcccgacacggcggagtgggagctgatcaggatggcgaccgacgcc
catcggcacaccaacgcccagggatccagctggaagcagaagcgcaagttcctgtcggat
gatatcggtcagggtcccatggttcccacctccgatggagacaaagtggacttggaagcc
ttcagcgagttcaccaagatcatgacccccgccatcacacgcgtcgtcgactttgccaag
aaattgcccatgttctcagagctgccttgtgaagaccagatcatcttgctgaagggctgc
tgcatggagatcatgtcgctgcgcgccgccgtacgctacgacccagagagcgagacgctg
acgctaaacggcgagatggcggtgaaacgtgagcagctgaagaacggcggattgggcgtg
gtgtcggacgccatctttgatttgggcaagagcttggctcagtttaacctggacgacacg
gaggtggcgctgatgcaggccgtgctgctcatgagctcagaccggtcgggcctcaccagc
ctggagaagatcgagcagtgccaggaggcctacctgctggcgttcgaacactacatcaac
taccgcaagcacaacattccccacttctggcccaagctgctgatgaaggtgacggacctg
cgcatgatcggggcgtgccacgccagccgcttcctccacatgaaggtggagtgtcccagc
gaactctttcccccgctcttcctggaggtcttcgaggaccaggaagtgtga
DBGET
integrated database retrieval system
