Hippoglossus hippoglossus (Atlantic halibut): 117766234
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Entry
117766234 CDS
T07778
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
hhip04137
Mitophagy - animal
hhip04144
Endocytosis
hhip04340
Hedgehog signaling pathway
hhip04350
TGF-beta signaling pathway
hhip04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117766234 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117766234 (smurf1)
04350 TGF-beta signaling pathway
117766234 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117766234 (smurf1)
04137 Mitophagy - animal
117766234 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
117766234 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117766234 (smurf1)
04121 Ubiquitin system [BR:
hhip04121
]
117766234 (smurf1)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117766234 (smurf1)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117766234 (smurf1)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117766234 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117766234 (smurf1)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
HECT type E3
117766234 (smurf1)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117766234 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
117766234
NCBI-ProteinID:
XP_034448980
LinkDB
All DBs
Position
8:19485073..19498425
Genome browser
AA seq
732 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPGQESRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKESSQTPQMDVGGEDGGGGGVGGGSGGGDGDVAARYERDLVHKLKLL
RHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAR
EWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHY
INGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKF
SQHELKPNGRNIPVTEDNKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDH
KELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGST
RVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLL
TAVEETCGFAVE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggaccaggaggaacgggtccagcattaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgtctgccagatccatttgccaaagtt
gtggtggacggatcaggtcaatgccactcgacagacacagtcaagagcacactggatccc
aaatggaatcagcactatgacctctacattggaaagacagactccatcaccatcagtata
tggaaccacaaaaagatccataaacgacagggggcgggcttcctcggctgcatacgactt
ctttctaatgctatcagcaggctaaaagacacaggctaccagcgtctagatctatgtaag
ctcaacccctcggacagcgacgcggtgcgggggcagattgttgtgagcttacagacacga
gaccgcatcggcagcggaggccccgtggtggactgcagaggactgttggaaaatgatggg
cctgtgtttgagggatgtttcagtgaagaaccgctgccctactctgaccccactggtgcg
gcggggggtgggaattgccggcttgactcacccggtcaggagagccgtcttcagacccag
cgaatcagagggcaggactccagaggccacggccacacccctcagaacagacctcacggg
caccagccgccagatctaccagaaggatatgagcagcgaacaacggtgcagggccaggtg
tatttcctacacacacagacaggtgtcagtacctggcacgaccctcggataccacgggac
ctggccagtgtgagctgcgaagagcttggtccgttgccggtgggctgggaggtccgaagc
actgtgtccggtcggatctactttgtggaccacaacaacagaaccacacagttcacagat
ccacgcctacacaccatcatcagccagcaatcccaagcaaaggaatcctcccaaaccccc
cagatggatgtggggggcgaggatggaggaggtggcggagtaggcggcggcagtggagga
ggagatggagacgtggcagcacgttacgagagagacttggtccataagctgaagctgctc
cggcacgagctgtcattgcagcagccacaagcgggacactgtcgtatagaggtgtcccga
gaggagatctttgaggagtcatatcggcaaataatgaagatgaggcccaaagacctgaag
aagcgtctcatggtgaagttcaggggagaggagggtctggactacggtggggtggccagg
gagtggctgtacctgctttgtcatgaaatgttgaacccatactacggcctgttccaatac
tcgacagacaatatctacacactacaaatcaaccctgactcctccatcaaccccgaccac
ttgtcatatttccactttgtgggtcgtgtgatgggccttgcagttttccatggtcactac
atcaacgggagtttcacgctgcccttctacaaacagctgctgggcaaacccatccagctc
aacgacctggagaccaccgacccggagttgcacaagagtctcgtctggatattagagaac
gacatcacttcggtcctcgaccacacgttctgcgtggagcacaatgcctttggaaagttt
tcacagcatgaactcaagcccaatgggcggaatatccccgtcaccgaggacaacaagaaa
gaatatgtcagactttacgtgaactggaggttcatgcgaggaatcgaagcccagtttctg
gctctacagaagggattcagtgaactcatcccccaacacctcctcaaaccgtttgaccat
aaagaacttgagttgatcatcggtggattggggaagatcgaccttgcagactggaagaca
aacacccggctgaagcactgcacaagtgaaagcaatgtggttcggtggttctggcaggcg
gtggaggccttcagtgaggagaggagaggacgcctgctgcagttcgtcaccggctccacc
agggtcccgctccagggtttcaaagcactgcagggttctacaggttctgcaggaccaagg
ctcttcaccatccatttgatagacgccaacacagacaacctgcccaaggcccacacatgt
tttaacaggatagacatcccaccctacgagtcttatgagaaactttacgagaaactgctg
acggctgtggaggagacctgcggcttcgctgtggagtga
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