Hippoglossus hippoglossus (Atlantic halibut): 117766241
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Entry
117766241 CDS
T07778
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117766241 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117766241 (rangap1a)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117766241 (rangap1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Nop14
MctB
SDA1_dom
CDC45
BUD22
Motif
Other DBs
NCBI-GeneID:
117766241
NCBI-ProteinID:
XP_034448994
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Position
8:complement(19755186..19761854)
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AA seq
576 aa
AA seq
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MASDIVAQLADSLAKAGVEDGELSYKGQGRKLDDAQSVEEIVKEIQEFEGLQALRLEGNT
FGVEAAQAIAKALETKSQFQRCYWSDMFTGRLRCEIPPALNSLGDALMLAGARLTVLDLS
DNAFGPDGVKGIENLLKSTACYTLQELRLNNCGMGIGGGKILAASLIQCHKKSSADGTPL
SLKVFVAGRNRLENDGATALAQAFQLMGSMEEVHMPQNGINHPGVTALATAMQHNAGLRI
LNLNDNTFTEKGAIAMAQALKHLRSIQVINFGDCLVRPAGAAAIAETVSEGLPILKELNL
SFCEITEEAALAVAQAVTNKDQLVKLDLNGNCLGEDGCKALRDTMEDMNMGELLGSLSDD
EGDQDDDDKDEDDDEEKDDDDDEEVDEEELEEEEEEEEEESIDNKLSTPVSAPRPPDVSS
FLSFPSPDKLLKLGAKRALLIEQQVDVSDATKTAEAFLKIASVYKEENNDVKNAVLDSID
ALMKKAFSTPSFQGYSFVSSLLVLLGLIKSEDKVKPVLVVPGHLHTLEHVVRQDYFPKEN
VAILEAFMSRNDKVLDSCGNARNGLQSTLHRVGAED
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagacattgttgcacagttggccgactctctggccaaggccggagtggaggac
ggagagctgagctacaaaggccaggggaggaagctggatgacgcccagtcagtggaggag
atagtgaaggagatccaggagtttgagggtctacaggccctgaggttggagggaaacacg
ttcggggtggaggctgcacaggccatcgccaaggccctggagacaaagagccagttccag
cgctgttactggagtgacatgttcacaggtcgtctgcgctgtgagatccctcctgccctg
aattcacttggtgacgctctgatgctggcaggcgccaggctgactgttttagacctcagt
gacaatgcctttgggccggatggggtgaagggcatcgagaatttgcttaaaagcaccgcc
tgctacacactgcaggagctacggctcaataactgtggcatgggcatcggaggggggaag
atcttggctgcctcattgatccagtgtcataaaaaatccagtgctgacggcacccccctc
agcctgaaggtgtttgttgctgggaggaaccggctggagaacgatggagccactgccctc
gctcaagctttccagttgatgggcagcatggaggaggttcacatgccccagaacggcatc
aatcacccaggagtgacggccctggccacagccatgcaacacaacgcaggactccgcatc
ctcaacctcaacgacaacaccttcactgagaagggggctatcgccatggctcaggccctg
aaacacctccgcagtatccaggtgataaactttggagactgcctggtgcggccggcgggg
gccgcagcgatcgcagaaaccgtatcagagggacttccaatcctcaaggaactcaatctg
tctttttgcgagatcacagaggaagctgctctggctgtggcacaagcagtgacgaacaag
gatcagctggtgaaactggacttaaatggtaactgtctcggagaggatggctgcaaagct
ctgagagacaccatggaagatatgaacatgggggagctccttggatccctcagtgacgac
gagggtgaccaagacgatgacgacaaggacgaagatgacgatgaggagaaggatgacgac
gatgatgaggaagtggatgaggaggaattagaggaagaagaggaggaggaggaagaggaa
agcattgacaacaagctgtctactcctgtgtcggcgcctcggcccccggatgtgtcgtcc
ttcctcagctttccgtcaccggacaaactgctcaaactgggggccaagagagcgttgctg
atcgagcagcaggtggatgttagcgatgcaacaaaaacagctgaagctttcctcaagata
gcgtctgtgtacaaggaggagaataatgacgttaagaacgcagtgctggacagtatcgat
gctcttatgaagaaagcgttctccactccttccttccaaggctacagctttgtgtcatct
ctgttagtgctgcttggacttatcaagagtgaggacaaagtgaagcctgtgctcgtggtt
cccggccacctccacaccttggagcacgtcgtccgacaggactacttccccaaagagaac
gtggccatcctcgaggccttcatgtcccgaaacgacaaagtcctggactcatgtggcaat
gcaagaaatggcctccaatcaacactgcatagagtcggggctgaggattga
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