Hippoglossus hippoglossus (Atlantic halibut): 117766257
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Entry
117766257 CDS
T07778
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117766257 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117766257 (fip1l1b)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117766257 (fip1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117766257
NCBI-ProteinID:
XP_034449024
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All DBs
Position
1:complement(15371426..15379972)
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AA seq
572 aa
AA seq
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MSAEEADKTTTTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPADASTEDAAAHAT
GNGVASEATGEGAAEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAAPVNLNIKTTG
SRPYGQVTSKMKGVDLDAPGSINGVAVVEADMESFEEKPWRKPGADLSDYFNYGFNEETW
KAYCEKQKRLRMGLEVSTVSSGTSKITVQQGRTGNDKDISILPVHTSKPDFTSPINLYKT
AISQVTRNTPGHLQVYQNPCGENRISPPQWAGPPVPDMSYYAKSGIIDVIGGQTATISRV
EGRRRHNLEGNNITVISEHTTSDAEPTPAKIPTFFPPGPLPPNIPPPPFLPPPPNVSTAP
PLIPPPRLPITVPPPGFPPPPSGPPPAIIPNMDSGHPGGYDGRPVPPYPFPQGAYPPPMT
GGAPPPWPPMMDNSKPWDYYPRREEKREKDRERPRERTHEREREREHSPSAMSYTSDEER
YRYREYQERGYVERHRERTSREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSH
RRHKHKKSKRSKEGKEAGEEISADQENQEAME
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaggcggacaaaacaaccaccactgatgccagcgccggagacgaggag
gaggaatggctgtatggagatgagtctgagagcaaagacgaggatgaagaagccaaactg
aacgcagcagtcagtgcacctgctgatgcttccacagaggatgctgctgcacacgcaaca
ggaaatggagtggcctctgaggccacaggtgaaggagcagctgaggacgtggacagtgat
agtgacagcgatgatgacgacgatgacgtccgagtcaccattggagacattaaaaccgga
gcaccacaatacacaacttatggagctgctcctgtaaatctcaacataaagacaacaggc
tcccgaccttatgggcaagtgacttcaaagatgaagggagtggatcttgatgctcctgga
agcatcaatggggttgcagtggtggaggcggacatggagtcatttgaagagaaaccctgg
aggaagccaggagcggatctgtccgactactttaactatggcttcaatgaagaaacgtgg
aaggcgtactgtgaaaaacagaagaggctgcgtatgggtctggaggtctctacagtcagt
tcagggacgagcaagatcacagttcagcaaggcaggacaggcaacgacaaagacatatcc
attttgcctgttcatacctcgaagccagacttcacgtctcccatcaacctgtacaagact
gccatcagtcaggtcaccagaaatacacctggacacctccaggtttaccagaatccctgt
ggtgaaaataggatctctccccctcagtgggccggcccgcctgttccggacatgtcctat
tatgcgaagagtggtatcatagatgtgattggtggacagacggccaccatcagcagggtg
gaaggtcgacgcagacacaacctggagggcaacaatatcacggtgatctctgaacacacc
acgtcagatgctgagcccactccagctaagattcccaccttcttccctccaggacctctt
cctccgaacatacccccacctccatttctccctccgccaccaaatgtcagcactgcaccc
ccactcatccccccacccaggttgcccattactgtccctccccctggttttcctcctcca
cctagtgggcccccacctgcaatcatccccaatatggacagtggccaccctggaggttat
gatggacgccctgttcctccgtatccgttccctcaaggtgcttaccctccacctatgact
ggaggtgcgcctcctccatggcccccaatgatggacaactcgaaaccctgggattattat
ccccgccgagaagaaaagagagagaaggacagagagaggcccagggagaggacgcatgag
cgggaaagagaaagggagcacagtccttcagctatgagctacactagcgacgaggagcgt
tatcgttaccgcgagtaccaggagcgtggttacgtagagcgccatcgtgaacggacgagt
cgagagaaagaggaaagacacagagagaggcggcaccgagagaaagaggagggacgccac
aagtcctctcgcagcagcagcagcaggaggagacacgacagcgaggagggcgacagccac
cggaggcacaaacacaagaagagcaagagaagcaaggagggcaaagaggccggcgaggag
atcagcgcagaccaagagaaccaggaggccatggagtag
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