Hippoglossus hippoglossus (Atlantic halibut): 117766306
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Entry
117766306 CDS
T07778
Symbol
abca3b
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117766306 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117766306 (abca3b)
Transporters [BR:
hhip02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117766306 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
117766306
NCBI-ProteinID:
XP_034449094
LinkDB
All DBs
Position
8:12626855..12657312
Genome browser
AA seq
1704 aa
AA seq
DB search
MAIARQFGLLVWKNYLQQKRQILVTLVEILLPLLFSGILIVLRQKVPFEDYPNATVYGSY
TVDALPTFLQRLQLAYVPGNSSVVRQVAENVRVRLSLSSVRGFETEEHLDHYVMHDPRSG
KLLAAVVFEHPFHDDEPMPLKVRYHLRLSFSPRNAPIKEKSELNPNSDLDWHTHSLFPLF
LMPGPREQHDNDGGTPGYNREGFLAVQHAVDRAIMHSYNSTAAAPLLPQVRVVLSRFPYP
AFIYDVFILAIQNQLPLLMVLSFTYTSLNIVRSVVLEKERKLKEYMRMMGLSNWLHWTAW
FLMFFLFLSISVFFFTLLVCIKVSPNGAVLSYSDPTLVFVFLLFFTVATINFSFMISAFF
SRANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIGIFEGK
GTGIQWSNLFDPVTVDDDFSMAQVMALLLFDSVLYGLVAWYMEAVFPGEYGVPLPSYFFV
LPSYWCSSPRMALVNEKEEEEDAEKALKGEFIEEEPAGLVSGIKIKHLVKDFRVGNKTRT
AVRDLTLNMFEGQISVLLGHNGAGKTTTLSMLTGLFPPTSGRAYINGYDICQDMSLIRRS
LGLCPQHDVLFDNLTVREHLLFFAQLKGYSKDKIPDEVDRILRILNLEDKRHARSKTLSG
GMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDEAD
LLGDRIIIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNATLE
SSAGAELSYILPKESTNRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVDSSL
DIQAIQLPALQYQHERRSNDWTTDDASSISGMTDVTDFTDSGTLISEDCSNIKLNTGVRL
HLQQFYAMFLKRALYSWRNWKVMVAQFLVPLVFTVVALVVARTFPSHQIAPQLRLALSRY
GPTRVPLALQPGASPLASALANAYSSQLPAQLGQLINITDFTDYILIQAEEEGGSFNERC
VVGAAFRGRSSQFTEATAYFNNEGYHTPATALMMVDNALFKLIAGPNASIEMGNYPMPLN
LSEIAQGRLTEGKTGFAIAINLMYGMASLSSTFALLLVTESAIKSKHVQQVSGVYLSNFW
FSALLWDMFNYLLPCLLMLVVFRAFAVKAFVEDNHLVDVLLLLLLYGWGVVPLMYLLSFF
FSTAATAYTRLTIFNMISGTATFLAVNIMAIPELKLQHLSRLLDKVFLIFPNYCLGMSFS
QFYQNYEFLSFCTSSFVSEELCKLYNVTYQTNFFSMSEPGVGRFLVAFSIQGVVFLILLF
TIELQFGRTLWRIVTSLCRRRKQLPLDAALLPEDRDVADERKRVLECQPIIESMVGSPLV
LQELSKVYSSGTNLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSGDAYI
DGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPERYVSGCVENVLRSL
LLEPHADKLIRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDSVTRTRE
SGKAIVITSHSMEECEALCTRLAVMVNGQMKCLGSPQHLKSKFGSGYTLLAKVHVEADLE
DSDLHLFKEFIESTFPGSQLKDAHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYRIEDYCV
SQISLEQVFLSFAQFQHCIESGKK
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgcgagacaatttggactgctggtgtggaaaaactatcttcagcagaaacgt
caaatcctggtaactctggtggagatactcctgcccttgctgttctctggcatcctcatc
gtgctgcgtcagaaagtgccttttgaggattacccgaatgccacggtctatgggagctac
actgtcgacgcactccccacgttcttgcaacgcttgcagctggcctacgtgcccggtaac
tccagtgtggtgcgccaggtggcggagaacgtgcgagtcagactgtctctctcctcagtg
cgtggctttgaaacagaggagcatttggaccactacgtgatgcatgaccctcggtcaggg
aagctgctggctgcggtggtgttcgagcaccctttccatgacgatgaacctatgccttta
aaggtgcgctaccacctgcggttgtccttcagcccgcgcaatgccccaatcaaggagaag
tcggagctgaacccgaacagtgacctggactggcacacacacagtctctttccccttttt
ctaatgccagggccaagagagcagcatgacaatgatgggggcacgccaggttataatcga
gagggctttctggcggtgcagcatgcagtggacagagccatcatgcattcttacaacagc
actgctgctgcccctctgctgccacaggtcagagtggtcctgtcacggtttccgtatcct
gcctttatatatgacgtcttcatcctggccattcagaaccaactgcccctacttatggtg
ctcagcttcacgtacacatccctcaacattgtacgatccgtcgtgctggaaaaggaaagg
aagctcaaggagtacatgaggatgatgggtctcagcaactggctccactggaccgcctgg
ttcctcatgttcttcctcttcctctccatttcagtctttttttttaccttgctggtctgt
atcaaggtgagccctaacggcgcagtgctgagctacagtgaccccacgctggtctttgtc
ttcctgctcttcttcactgtggccaccatcaacttcagcttcatgatcagtgccttcttc
tcacgagccaacgtggcagcagcagcgggcggcttcatttattttctgagctacttgcct
tatttgttcctgtggccacgctacgacttactgagccatgcccagaaggtgtcagcctgc
cttatctccaacgtggccatggccatgggtgctcagctcattggaatattcgaaggcaaa
ggcacaggaatccagtggtctaacctgtttgaccctgtcactgtggatgacgacttctcc
atggcccaggttatggccttgctgctgttcgactctgtgctttatgggctggtagcctgg
tacatggaagcagtttttcccggggagtatggagtgcctctaccatcctacttctttgta
ctgccttcctactggtgcagcagccctcgcatggctctcgtgaatgagaaagaggaagag
gaggatgcagaaaaggctctgaaaggagagtttatagaggaggaaccagctggattagtc
tctgggatcaagatcaaacaccttgttaaggatttcagagtgggcaacaagacgcgtaca
gcggtgcgggatctgacgctgaacatgtttgaaggacagatctcggtgctgctgggacac
aatggtgctgggaagacgacgacgctgtccatgctgacaggtctttttcctcccaccagt
ggcagggcctacatcaacggttacgacatctgtcaggacatgtctctgatccgccgcagt
ttgggactctgtccccagcacgacgtactatttgataacctcacagtcagagagcacctg
cttttcttcgcacagttgaaaggctactccaaagacaagattccagacgaagtggacaga
atcctccgtatcctgaaccttgaggacaagcggcacgctcgctccaagaccctctctggt
ggcatgaagagaaaactctctattggcattgccctcattggagactccaaggttgtaatg
ttagatgagcccacatcgggtatggacccctcagctcgacgtgccacctgggacctcctg
caaggggagaaacggggtcgcaccattctgctcaccacgcacttcatggacgaggctgac
ctgctcggagaccgtatcatcatcatggcaggaggagagctgcagtgctgcgggtcaccg
ctcttccttaagaacaaatatggtgctggctaccacatggtgatagtaaaggatgctctt
tgtaacgtgtccgagatcacccgccttgtccacatgtatgttccaaacgccacgctggag
agcagcgccggagccgagctctcctacattttgcccaaagaaagcaccaacaggtttgag
ctgctgttcgctgagctggagatgaacagagaggaactgggcatcgccagctacggagcc
tctgtcaccaccatggaagaagttttcctcagagtgggaaagctggtagattccagtttg
gacatccaggctatccagctgcccgcccttcagtaccaacatgagagacggtccaatgac
tggaccacagacgacgccagcagcatcagcggcatgaccgatgtcaccgacttcacagac
agcggcactctcatctcagaggactgctccaacatcaagctcaacacgggggtcagactc
cacctgcaacagttctatgccatgttcctgaagagggcgctttacagctggagaaactgg
aaggtgatggtggctcagttcctggttcctttggtcttcactgtcgtggccttagttgtg
gcacgcactttccccagtcaccagatcgcccctcagctgaggctggcactcagccgctac
ggtcccaccagggtccctctggctctgcagcccggggcgagtcccctggcttctgctctg
gcaaacgcatacagttcacagctccccgcccagctaggccaactcatcaacatcactgac
ttcactgattacatcctgatccaggcagaggaggagggaggcagctttaatgagcgctgt
gtggtgggtgctgccttccgtggccgcagcagccagtttactgaagccacagcctacttc
aacaacgagggctaccacacacctgccacggctctcatgatggtggacaacgctctgttc
aaacttatagcggggccaaatgcttccatagagatgggaaattaccccatgccactcaac
ctgtcggagatcgcccagggccggctgacagagggtaagacgggctttgccatcgccatc
aacctgatgtacggcatggcctccctctccagcaccttcgccctgctgctcgtcacagag
tccgctattaagtccaagcacgtgcagcaggtcagcggcgtctacctgtcaaacttctgg
ttttcggcgctgctgtgggacatgttcaactacctgctgccctgtctcctcatgttggtg
gtgttccgggcgtttgcagtcaaggccttcgtagaggataaccacctggtcgatgtgttg
ctgttgctgttgctctacggctggggggtggtgcctcttatgtacctactcagctttttc
ttctccactgctgccaccgcctacactcgcctgaccatcttcaacatgatctccggcacg
gccaccttcctggctgtcaacatcatggccatcccagagttgaaactgcagcacctgtca
cgcttactggataaggtgttcctgatcttcccaaactactgcctcggaatgtccttcagc
cagttctaccagaactacgaattcctctctttttgtacatccagctttgttagcgaggaa
ctctgcaaattatacaacgtcacataccagacaaacttcttctccatgtcggagcctggt
gtgggacgcttcctcgtggccttttcgattcagggagtggtcttccttattctgctgttt
accatcgagctgcagtttggccgcacactctggagaattgtcacctccctgtgcagacga
cgcaaacagttacctctagatgcagcgctccttccagaggacagagacgtggccgatgag
aggaagagggtcctggagtgccagccgataatagagtctatggtcggcagcccccttgtt
ctgcaggagctcagcaaggtgtacagcagcgggacaaatcttctggctgtggaccggctg
tctctagctgttggaaaaggcgagtgttttggcctcctgggcttcaatggagcagggaag
accacgacctttaagatgctgacgggtgacgagagcgttacctccggggacgcttacatt
gatggatacagcattttgagggacattaaaaaggtgcagcagcgcatcggttactgtccc
cagtttgacgccgtgttggaccacatgacaggaagagaaactctgagtatgtatgccagg
ctcagaggaataccagagaggtatgtgtccggctgtgtggagaatgtccttaggtccctg
ctgctggagcctcacgctgataaactgatccgcagctacagtggtggtaacaagcggaag
ctgagtgcgggcatggctctgattggtgggcctccggtcatcttcctggacgaaccctcg
actgggatggaccctgtggccaggaggctgctgtgggattcggttacacgcacacgagag
tctggcaaggccatagtcatcacttctcatagtatggaggagtgcgaggccctgtgcacc
aggctggcggtgatggtcaacggccagatgaaatgtctcgggagtccccaacacctgaag
agcaagtttggcagtggctacactctgctggctaaagtgcacgtggaggctgacctggag
gacagtgacctgcatctgtttaaagaattcattgaaagcacttttccaggaagtcaacta
aaggatgcacaccaggggatggtgcactaccacttgactgacaaaacactaacctgggcc
caggtgtttggcactttggaggcagccaaagagaaataccgcattgaagattactgcgtg
agccagatatccctggagcaggtgttcctcagctttgcccagttccagcactgcatagag
agcgggaagaagtag
DBGET
integrated database retrieval system
