Hippoglossus hippoglossus (Atlantic halibut): 117766412
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Entry
117766412 CDS
T07778
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117766412 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117766412 (lrrc4ba)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
NGL family
117766412 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117766412
NCBI-ProteinID:
XP_034449300
LinkDB
All DBs
Position
8:11236089..11272043
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AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EQVPESISVNTRYLNLQENSIQIIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALLRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDEDSALVATNETFIRIHSGP
TPSGHLWPDGVSTTASTLSTSWSSPSPRTTRPTFTAPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGSSGIGGGQSLRLHHPEMVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTVSGMGLNN
NNNPSSCSQNTSLSCSQVPTSTCGGNTTGGTLPSPVPLPQLGLHSSLKGLMGKGQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccctcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtaggagccgcttcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacctg
gagcaggtgcccgagagcatatctgtcaacacgcgatacctcaatctgcaggagaactca
atacagattatcaagtctgacaccttcaagcacttgaggcacctcgagatcctccaactc
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acgctggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgggagctgtggctgcgcaacaatcccattgagactctgccaggctatgcc
ttccaccgtgtgccctcgcttcgacgcctggacctgggtgagctcaagaagttggatttc
atctctgacgcagcattcgtgggcctcatcaatctacggtacctgaacctgggcatgtgt
ggactgaaggacattcccaaattgacagcccttttgcgtttggaggagctggagctgtct
ggaaaccgactggagatcatccgacccggctccttccagggcttagagtctctccgcaag
ctctggctcatgcactcacaggtatcggtcattgagcgtaatgccttcgatgacctgaaa
agcctggaggagcttaacctgtcccataactccctgcactccttgccccatgacctcttc
acgccccttcaccagctggagagggtacaccttaaccacaacccctgggtctgcaactgt
gatgtgctttggcttagttggtggttgaaagaaacggtgcccagcaacaccacctgctgt
gcccgctgccatgcgccgccattcttaaagggcaagtacattggagagcttgaccaaagc
cacttcacctgctatgcgcctgtcattgttgaaccaccgacagacctcaatgtcacagag
ggtatggccgctgaactgaagtgtcgcacaagcacctccacgacatctgttaactggata
acccctaatggcactctaatgacacacggctcttaccgggtgcggatatcagtcctgcat
gatggcacgctcaactttacaaatgtcaccctgcgagacacaggccagtacacctgcatg
gtcaccaatgctgctggcaacaccacagcaactgctgtgctcaatgtcactgctgctgac
gccagtgtcaactacacctactttacaacagtcactgtggaaacagtggagactccagga
gatgaggattctgcgctggttgccaccaatgagaccttcattcgtattcactctggcccc
actccctcgggtcacttgtggccagatggtgtttccaccacagcttctactttgtcaact
agctggtcctctccctctccccgcaccacccgacccaccttcactgcgcccatcacggag
ccgggcttctcaggtctagatgatgtgatgaagaccaccaagatcatcattggctgcttt
gtagccattaccttcatggcagcagtgatgctggtggtgttctacaagttgaggaagcag
caccagctgcataaacaccatggccctgctcgtgccattgagatcatcaatgtggaggat
gagcttggggccggggcgagtggcagaggcagcggcatctcaggaggctccaccgttacg
cagagcggaagcagtggaattggagggggccagagcctccggctgcaccatccggagatg
gtcaacctgccaaacctggctcggtcagagcacctcaaccactactacaaaacccatcac
ttcaacaacaacatgatgggcctgggcatgggcacagtctccggtatgggcctcaacaac
aacaacaacccctcatcctgctctcagaacacatccttatcctgttcccaggttccaact
tccacatgtgggggaaataccacaggtggcaccttaccctcccctgtaccccttccccag
ctgggtctccacagttctctgaaaggcctcatggggaaaggccagaatgagccactgctt
tttaagagtggctccaaagaaaatgtgcaagagactcaaatctga
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