Hippoglossus hippoglossus (Atlantic halibut): 117766616
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Entry
117766616 CDS
T07778
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117766616 (tbc1d1)
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117766616 (tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117766616 (tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117766616 (tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF6979
Motif
Other DBs
NCBI-GeneID:
117766616
NCBI-ProteinID:
XP_034449726
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All DBs
Position
1:16672280..16713603
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AA seq
1402 aa
AA seq
DB search
MEGLYFEVKPRRDERRSLGISEEPRPNLTSNRQSCPSFSRLTSTHCPQKVPHAAERTAKV
EEEGEEEEEIRYKLTLIGSRPVHHLTTMAMLPWVVAEISRSRPAEKELGAGIQCAGPGDG
QLDSSTSNQKVSLSVSASWLRCVSILGEGVVWDPLTHTVLFECRPHQVTKLIHNSQEPSS
FGCLVRKTPNCACYVFQCQDKTKVPEIISTLRQAGKSSARNNDIVTVSKKPSTGGSDSSD
SSSSHLSTSSTSAAPTVVVSPTAFAKKFEVLFCGRVSVAHRKAPPALIDECIEKFSQLHG
SGTTDKGENGGRLVGGLRRALNFQSNGLGSGAVGNGATGSPTTGKRPVLFKQDLSFPSLQ
GLDENGLSPEISLTNTTDALTRSAEVQPTSLQENRTMLFMVGRSQIFLVSPDTKKVAIEK
GFREISFCSQGIRHVDHFGFICRETVEGGSCHFVCYVFQCTDESLVDEIMLTLKQAFSVA
ALQQSAKTQSQQCDSCPMQQLHRLCERIEGLQPSKTKLELQRHLASLDNQEQALVFENTM
RARPKSDQEENELVMAWLRNLYEEKQKSHQHTLPGDSSKQVCEEAAPAPVQAQQQSSSRQ
RLEQFKSRAKRSLTESLEGIWKGSSKARISRDNSEGSDSSSSIFTFNSSQEQLCLDDPLS
SSSTLPPTSPLRCHNSTGDLKHLDTSLRVSPSSSSLPGDEQPQGFRRRASTFSHPPTPSS
GFENSPVHTLNHTPQDATAATKPKLVRHYSVSTDTPHQSKHASTNSTLPPVAPCTSSSSS
ALLPHHPSSPSSGARLIKRSPLVGLRARLHSSSSVPNFLKFPFLAPVQENDCPQPKSSDV
AALSTPTAACGVGESPLRHRHSWRQQIFLRVATPQKNTDPNERGDSCHDGGRVCMGPGGV
GGSGDLSMRAVPEERTKRSKEELRDLWTKAILQQILLQRMERENQKLQATESDLQNKRLK
LDYEEITPCLKEVTLVWEKMMGTPGRARVKFDTETIHAAVAHGVPRMHRGEIWKFLSEQY
LLRQTVPSRPPANPTPYKELLKQLTSQQHAILIDLGRTFPTHPYFQAQLGAGQLSLYNIL
KAYSLLDPEVGYCQGLSFIAGVLLLHMEEEDAFNMLKFLMYDVGLRKQYRPDMIVLQIQM
YQLSRLLHDYHRDLYNHLEQQEIGPSLYATPWFLTAFASHFPLGFVARVFDMLFLQGSEV
IFKVAMSLLRSHKPLILQHDSLESIVDFIKTTLPNLGLVQMEKTINQVCEMDVSKQLQAY
EVEYHVLQDELLDTPPTLNQHQRAAQLERTNQSLRQQNLDLLEELQVSHAHVHSLESRVE
EFVQSEGRLTEQVSALEEEKKQLLSTVTHLQDLLTSLGIQSSLDGHAPPPAAERHAASAA
AAATTNQTVESLLHLLALPESS
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactctactttgaagtgaagcccagaagagatgagcgacgcagtttggggatc
tctgaggaaccccgtccaaatctaacttcaaaccgccagtcctgtccatcattttcacgt
ctcacctccacacactgtcctcagaaagtcccccatgctgcagagaggaccgcaaaggtg
gaggaagagggagaggaagaggaggagatacgatacaaactgacattgattggttctcgg
ccggtccaccacctcacgaccatggccatgctaccctgggtggtggctgagatcagcagg
tctcggcctgcggagaaggagctgggcgcggggattcagtgtgcagggcccggagatgga
cagctggactcttccacctccaatcagaaggtttctctgagtgtgtcagcatcgtggctg
cgatgcgtgtccattctgggagagggagtcgtctgggatcctctcacacacacggtgctg
tttgagtgtcgacctcaccaggtcactaaactaatccacaacagccaggagcccagcagc
tttggctgcctggtccgaaagactccaaactgtgcctgctacgtcttccagtgccaggac
aagaccaaggtccctgagatcatcagtacgttgaggcaggccggcaagagctctgcacgc
aacaatgatatcgtcaccgtttccaagaaaccgtccaccggaggcagtgattcctcagat
tcatcttcttctcatctctccacatcgtcaacctccgcagcaccaactgtagtcgtgtct
ccgacagcttttgccaaaaagtttgaggtgctattttgtggccgtgtgagcgttgctcac
aggaaagctccacccgcacttatcgatgagtgcatcgagaaattcagccagttacatggc
tcagggacaaccgataaaggagaaaatggtgggaggttggtgggtgggctgaggagggca
ttaaacttccaatccaatggactggggagtggtgctgttggtaatggcgctactgggagc
cccactactggcaagcggcctgtcttgttcaagcaagacctcagctttcccagtctacag
ggcctggatgagaacggactctcacctgagatttctctcaccaacactactgatgcactt
acacgctccgctgaagtacagcccaccagcctgcaggagaacaggaccatgctgttcatg
gttggcaggtctcagatcttcttggtcagtccggacactaagaaagttgccatagagaag
ggtttcagagaaatctccttctgctcacagggtattcgtcacgtggatcactttggcttc
atttgcagagagacggtggaaggagggagctgccattttgtttgctatgtcttccagtgt
acagacgaatcactggtggatgagatcatgctgactttgaagcaggcgttctctgtggca
gccctgcagcagagtgcaaagacccagagccagcagtgtgacagttgccccatgcagcag
ctccacaggctctgtgagaggatagaaggtctacaaccatcaaaaaccaaactggagctt
cagagacatctggcctctctggacaatcaggagcaagcattggtgtttgaaaacactatg
agggctcgtcctaagagcgatcaggaagagaatgagttggtgatggcctggctgaggaat
ctgtatgaggagaaacagaagagccatcagcacacactgcctggagacagcagcaaacaa
gtgtgtgaggaggcagctccagctcctgtgcaggcgcagcagcagagtagcagccggcag
cgacttgaacagttcaagagccgagccaagcgctctctcactgagtccctggagggcatc
tggaaggggagcagcaaggccaggattagcagggacaacagtgaaggaagtgacagcagc
tcctccatctttactttcaacagcagccaggaacagctctgcttagatgaccccttatcg
tcctcctccacgctaccacccaccagcccactcaggtgccacaactcaacaggggacctg
aagcaccttgacacctctctccgtgtgtctccctcctcctcctctctacctggtgatgag
cagccgcagggcttccgtcgacgggccagcaccttcagccaccctccaaccccctcctca
ggattcgagaactcaccggtgcacacactaaatcacactccacaggacgccaccgccgct
accaagcccaagctcgtacgacactactctgtcagcactgacacgccacaccaaagcaaa
catgcctcaaccaactccacccttcctcctgttgctccctgcacatcatcctcctcctct
gctctgctccctcatcacccttcctccccttcttctggagcccggctcattaagagaagc
cctttggttggtcttcgtgctcgtctccactcctcctcctctgtccctaactttctgaaa
tttccatttctggcccctgtccaagagaatgattgtcctcagccaaagagcagtgacgtt
gcagctctctctacaccaaccgcagcgtgcggagtgggggaaagccctctgcgccaccgc
cactcatggaggcagcagatctttctacgggtcgccacacctcagaaaaacacagacccc
aacgagcggggggactcctgtcacgatggtggtcgagtgtgcatgggcccggggggagtt
ggaggaagtggcgacttgtccatgagagcggtgcctgaggagaggacgaagaggagcaaa
gaggagctcagggatctgtggacgaaggccatcctgcagcaaatcctgctgcagaggatg
gagagagagaaccagaaactgcaggccaccgagagcgacctgcagaacaagcgtctgaag
ctggactacgaggagatcactccatgtctgaaggaggtcactctggtgtgggagaagatg
atgggaactcctggtagagcaagggtcaaatttgacacagagaccatacatgctgctgtt
gcacacggagtcccgaggatgcatcgaggcgagatctggaagtttctctccgagcagtat
ctgctcaggcagacggtgccctcccgaccccccgccaaccccactccatacaaagagctg
ctgaaacagctcacgtcgcagcaacacgccatcctcatagacctgggtcgcacttttccc
actcatccatatttccaagcccagctgggggcaggacagctgtctctgtacaacatactg
aaagcctactcactgctggaccctgaggtgggctactgccagggcctgtccttcatagct
ggagtcctgctgttacacatggaggaggaggacgccttcaacatgctcaaatttctgatg
tatgatgtcgggcttcgtaaacagtacaggcctgacatgattgtcctgcagattcagatg
taccagttgtcgcggctgctccatgactaccacagggatctctacaaccacctggagcag
caagaaatcgggcccagcttatacgccaccccctggttcctcactgccttcgcctcgcat
ttccccctcggctttgtggccagagtcttcgacatgttgttcctgcaggggtcagaggtc
atcttcaaggtggccatgagtctgctgaggagccacaaacctctgatccttcagcacgac
agcctggagtccattgtggacttcatcaagaccacgctgcccaacctgggcctggtgcag
atggagaaaaccatcaaccaggtttgtgagatggacgtgtcgaagcagctccaggcctat
gaggtggagtaccacgtcctgcaggacgagctgctggacacgcccccgactctcaaccag
caccagcgagctgcgcagctggagaggaccaatcagagcctccgacagcagaacctcgac
ctgctggaggagctgcaggtgtctcatgctcacgtgcacagcctcgagagccgagtggag
gagtttgtccagtcggagggtcgactgacggagcaagtctctgcactggaggaggagaag
aagcagctgctgagcacggtcacgcacctccaggacctcctcaccagcctgggcatacaa
agctcccttgatggacacgcaccccccccagctgctgaaagacacgcagcctcagcagca
gcagcagcaacaaccaaccagactgtggaatcacttctccacctgttggctcttccagag
agttcatga
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