Hippoglossus hippoglossus (Atlantic halibut): 117766633
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Entry
117766633 CDS
T07778
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03420
Nucleotide excision repair
hhip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117766633 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
117766633 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hhip03051
]
117766633 (rad23aa)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117766633 (rad23aa)
Proteasome [BR:
hhip03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117766633 (rad23aa)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117766633 (rad23aa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
Ubiquitin_2
OTU1_UBXL
DUF3306
Motif
Other DBs
NCBI-GeneID:
117766633
NCBI-ProteinID:
XP_034449761
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Position
8:complement(21777357..21783492)
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AA seq
363 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKPAAAASPPASEAPKPPVQDSGSTSTAVPATTPAPAPTPAAAP
VPPEEAKEEPSAADTEPQQPASSSGGSQGLDASSALVTGAEYEAMLTEIMSMGYERERVV
AALRASFNNPHRAVEYLLTGIPSSPVQESNPPVPAPAPGPTEAPSLAEGENPLAFLRTQP
QFQHMRQAIQQNPALLPALLQQLGRENPQLLQQISQYQELFIQMLNEPVGEGGDAPEVGE
MGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEPLVIQAYFACEKNENLAANFLLNQGM
EDD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaccctgaagaccctgcagcagcagacgatccagatcgagatagaccccgag
caaacggtgaaggcgttgaaagagaagatagaagcagaaagaggtaaagacaacttcccc
gtgtccggccagaagctgatctacgccgggaagatcctgcaggacgacacgcccatcaag
gactacaagatcgatgagaagaactttgtggtggtgatggtgtccaaggccaagcctgca
gctgccgcctcgcccccggcctcagaagctcccaagccccccgtacaggactctggctcc
acgtcaacagctgtgccggccacaaccccggccccggccccgaccccagcagctgccccc
gtcccccccgaggaggccaaagaggagccgagtgccgcggatacagaaccacaacaacca
gccagctccagcggtgggagccagggcctggatgcctcctcagcactggtgactggggcc
gagtacgaggcgatgctgacggagatcatgtctatgggctatgaaagggagcgagtggtg
gctgcactacgggccagtttcaacaacccccacagagctgtagaatacctcctcactggt
atccccagcagcccagtccaggagagtaatccaccagtgccggcccctgcacctggaccc
acggaagccccgtctctagcggagggagaaaatccacttgcattcctgcggacccagccc
cagtttcagcacatgagacaggccatccagcagaaccctgctctgctgcctgctctcctg
cagcaactaggaagagagaaccctcaacttctacagcaaatcagtcaatatcaggagcta
ttcatccagatgttgaacgagccagtgggggagggaggagacgcaccagaggttggagag
atgggggcggcgggggaggagggcgcgcctgtcaactatatccaggttacacctcaggag
aaggaagccatcgaaaggttaaaagcgttgggtttccctgagcctctggtgatccaggcc
tacttcgcctgcgagaagaacgagaacctggcggccaactttctcctcaaccagggaatg
gaggatgactga
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