Hippoglossus hippoglossus (Atlantic halibut): 117766665
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Entry
117766665 CDS
T07778
Symbol
cacna1ia
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117766665 (cacna1ia)
04020 Calcium signaling pathway
117766665 (cacna1ia)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117766665 (cacna1ia)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117766665 (cacna1ia)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
117766665
NCBI-ProteinID:
XP_034449820
LinkDB
All DBs
Position
8:complement(16620522..16768226)
Genome browser
AA seq
2364 aa
AA seq
DB search
MTSEVCPVPLGSVSSAVPGQSEDYGSTQADDIIEEVGPGDDVSIGSDLSTLVLPFPELAP
VVFFCLKQTTCPRNWCIRMVSSPWFERISIMVILLNCVTLGMYQPCENIDCTSDRCQILQ
AFDAFIYIFFALEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMTGMVEYSLDLQNINLSA
IRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLR
NRCYPEKNFTLSSGMTLPTPYYQPEEDDERPFICSLPSDNGIMSCTDVPARREGGRTCCL
DKEDALHRQALGLSLEPLTNGSGAGEAMGLCINWNQYYTRCHTGNSNPHKSAINFDNIVY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETK
QREHQLMQEQRAQCLSSSTLASMAEPGDCYEEIFQLVCHVLRKAKRRSTALYYTLRGKPP
PAGGGRGNRRAGGKMNGERHHSRHPKSSHCPHQSKQDHGSQTEANSISLSVPQNPEDCPI
CALSLKDGARAAGDSDNREEDEEDAVKETDKEENHLEERGEGEKKKKKKKKRRTCFGLCR
DLWKGMRRKLWGIVESKYFSRGIMIAILINTISMGIEHHNQPEELTNVLEICNIVFTSMF
TLEMILKLTAFGFFEYLRNPYNIFDGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVR
FMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKN
FDSLLWAIVTVFQILTQEDWNMVLYNGMASTSPCAALYFVALMTFGNYVLFNLLVAILVE
GFQAEGDANRSYSEDDRSSCNFEETEKQKDSLQLSDPKICTLTPNGHMDLSSLPAGLFPG
ERLTFALGSRKNSAISLGRANLEQRALYPCRRYHNWGRTLPHHPQALWARRSSWNSLGGG
RPCSSSSPCASPSFTPTSARPFYGYGLGGLGGLVGGSLRIRGPRASSSPHRHFHGVHPDE
EEALLSPPAVASHSLHLPHPMLPGHFVPRRDRRALSLELPHLLQVPGPPHPPPLPPPPHH
LPPPMALHRKKSVSGGMIISAGGGGGLDSLGGLGGVHQDCNGKTPLSQLLQPPTRHQTEQ
AGGADPQSQLMTDVFPQVNARSKDREDLDDDIEYSLCFRIQKMLEAYRPDWCESREDWSV
FLFSPQNKFRQICQSIIAHKLFDYVVLAFIFSNCITVALERPKILQGSLERVFLTISNYI
FTAIFVSEMTLKVVSMGLYVGDQAYLRSSWNVLDGFLVFVSLIDIVVSMAGGAKILGVLR
VLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKF
FYCFGPDVKNITNKSDCLQANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDA
VAVDQQPVTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEK
RQRRMEKKRRKAHKLPYYASYCNVRLMIHTLCTNHYLDLIITFIICINVITMSLEHFNQP
HSLDLALKYCNYFFTSTFVLESVLKLIAFGFRRFFKERWNQLDLAIVLLSVMGIILEEIE
ISSALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFI
YAALGVELFGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECP
PDHGTDMDYACNPSLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMD
AEIELELAQGTLCCMGAPSCGGGGVEKGLVVAGSGPGGPAGGRERGDGRGEAGRKMRHAA
ATAHQGLYNSRSSSRTLYSPAQESQWLDSVSLLIKDTLEGEMLMIDNLSGSVFHHYSSPA
PICKDCKSHPQEQIRMAEIEQASLKSEQLSDKSSSPALPDDLSLDENTSYQLLARGGKGS
SSSDSEEAGGGGHQTRTVVQSQVQGLGQPCRALCTGSEMDTTLQEMDLQTHQAHMRSPHC
SPGGVSRSSNKDRNKEGAGGDRGISPLFHLPAEFFHPAGVIIPAPPRSRSLRLTRSHKLT
SPASWASLRSPGAHREMLCTQFPSHSDSSLATGSSEGSLQTTLEEGLSFSISPPQNLELP
LPTAPLPLVCPLPLPEDRTILSSPVQTLRPRSSPSSALTLQATRGHQRSQSSGRGSTSPC
YTRDDSIDPSDEDLGIGIGSSIGGCGSSQAGNSEHLSETLSSLSLTSLLSPSSLVYPGGA
VKKCNSTGSLDQGGVLLSSRGKDGRREILGLELMDPQGFLANPWTGALVDKRRGDGSVEI
GVGEEGFKGKSSSQTTVGPCRKNR
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggtgtgtcctgtgccgctggggagcgtctcctcagcagtgccagggcag
agtgaggactacggctcgacgcaggctgatgacatcattgaggaagtgggtccgggcgac
gatgtcagcatcggcagtgacctcagcactctcgtgctgcccttcccggagctggcgccc
gtggtctttttttgccttaagcagaccacctgtcctcgcaactggtgcatccgcatggtc
tccagcccgtggttcgagaggattagcatcatggtgatcctgctcaactgtgtgacactg
ggcatgtaccagccctgtgagaacatcgactgcacctcggaccgctgccagattctgcag
gccttcgatgcgttcatctacatcttcttcgcgttggagatggtggtgaagatggtggcg
cttgggatctttggccgtcgctgttacctgggagacacctggaacaggctggacttcttc
atcgtcatgactgggatggtggaatactcgctggacctgcagaatatcaacctgtcggcc
attcggacggtgagggttcttcggccgctcaaagccatcaacagagtaccaagtatgcgg
atcctggtgaacctgctgctcgacactctgcccatgctgggcaacgtgctgttgctctgc
ttcttcgtcttcttcatcttcggcatcatcggcgtgcagctgtgggcggggctactgagg
aaccgctgctacccggagaagaacttcactctgtcgtcaggtatgactcttccaactccg
tactatcagccggaggaggacgatgaacgccccttcatctgctccttgccgtctgacaat
ggcatcatgtcgtgtaccgatgtgccggcgaggcgcgaaggaggccgcacctgctgcctg
gacaaggaggatgcgctccacagacaagctctgggcctgagtctggagccgctgaccaac
ggcagtggtgcaggtgaagcgatgggtctgtgtatcaactggaaccagtattacactcgc
tgccacacagggaacagtaaccctcacaaaagtgccatcaactttgacaacatcgtctac
gcctggattgtcatttttcaggtgatcactctggagggctgggtggagatcatgtactac
gtgatggatgctcactccttctacaacttcatctacttcatcttactcatcattattggt
tcgttcttcatgatcaacctgtgcctggtggtcatcgccacccagttctctgagaccaaa
cagcgggagcaccagctgatgcaggagcaaagggctcagtgcctgtcctcctccacgttg
gccagcatggctgagccgggagattgctacgaggagatcttccagctggtctgccacgtc
ctccgcaaggctaagaggagatcgacggctctctactacacgctgaggggcaagcccccg
ccagctggtggaggcaggggtaacaggcgcgccggagggaagatgaacggagagcggcat
cactccagacacccaaaatcatcccactgtccacaccagagcaagcaagaccacggctct
cagacggaagccaactccatcagtctgtctgtccctcaaaatccagaggactgccccata
tgtgcgctgtcgctgaaagacggggcaagggcagcgggagactctgacaaccgcgaggag
gacgaggaggatgctgtgaaagaaacggacaaggaagagaaccacttagaggagagggga
gaaggggagaagaagaagaagaagaagaagaagaggaggacgtgcttcggactctgtagg
gacctttggaagggtatgaggaggaaactttggggcattgtggagagcaagtacttcagc
cggggcatcatgatcgccattctcatcaacaccatcagtatgggcatcgagcatcataac
cagcccgaggagctgaccaacgtcctggagatctgcaacatcgtcttcaccagcatgttc
acgctggagatgatcctcaagctgactgcgttcggcttctttgagtacctgaggaacccc
tacaacatatttgatggcatcattgttatcatcagtgtgtgtgaaatcatcggccaagca
gacggcggcctgtcagtgctgaggaccttccggctgctgagggtcattaagctggtgagg
ttcatgcctgcactgaggcggcagctggtggtgctgatgaagacgatggacaacgtggcc
accttctgtatgctgctcatgctgttcatcttcatcttcagtatcctggggatgcatata
tttggctgcaagttcagtctgaagacagaggccggagacacggtgcccgacaggaagaac
tttgactccctgctctgggccattgtcactgtctttcagattctgactcaggaggactgg
aacatggtgctctacaacggcatggcctccacctccccctgtgctgctctctattttgtg
gctctcatgacgtttggaaactatgtgctcttcaacttactggtcgccatcttggttgag
ggcttccaagctgagggcgacgcaaaccgctcctactcggaagatgacaggtcctcctgt
aattttgaggagactgaaaagcagaaagactctctgcagctctcagacccaaagatctgt
acgctgacccccaatgggcacatggacttgtcctccctgcctgctggtctgtttccagga
gagaggttgacctttgctcttggctccaggaagaatagcgctatttctcttggcagggcc
aacctggagcagagggctttgtatccctgtcggcgttaccacaactggggacgcacgctg
cctcaccaccctcaggccctgtgggcccgtcgttccagctggaacagcctgggaggcggc
cggccttgttcttcctcatctccctgcgccagtccatccttcactcccacttccgcaagg
cccttctatggctacggcctaggtggtctgggagggttggttggagggagcctgcgtatc
cgtggtccccgtgcctcgtcatccccgcaccgacacttccatggcgtccacccagacgag
gaggaggctctgctctctcctcccgctgttgcttcccactctcttcacctcccccaccct
atgctcccaggtcactttgtacccaggagggaccgcagagctctatcactggagctgccc
cacctgctgcaggtgccgggacccccacaccctccaccactgccgccgccgccacaccac
ctaccgccccccatggcactccacaggaagaagagcgtctctggtgggatgataatcagc
gcaggtggtggcggtggcctcgacagtctgggtgggttagggggggtccaccaggactgt
aacgggaagacaccgctgtctcagcttctccagcccccaactagacaccagaccgagcag
gccggaggggcggacccccagagccagctgatgactgacgtcttcccccaggtgaacgcg
cgcagcaaggaccgggaggacctggatgatgacatcgaatatagcttgtgcttccgcatc
cagaagatgttagaggcgtacagaccggactggtgtgagagcagagaggactggtccgtc
ttcctgttctccccacagaacaagttcaggcagatatgccagtcgattatagcccataag
ctgtttgactatgtggtgctggccttcatcttctccaactgcatcacggtagctctggag
aggcccaagatattacagggcagcttggaaagagtctttctcaccatctccaactacatc
tttacggccatcttcgtgagcgagatgacactcaaggtggtctccatgggtctgtatgtg
ggtgaccaggcttacctgcggagcagctggaacgtcctggatggcttcctggtgtttgtg
tctttgatcgacatcgttgtgtccatggcgggtggggccaagatcctgggggtgcttcga
gtcctcaggttgctcaggacattgcgtcctctcagggtgatcagcagagctccgggtctg
aagctggtggtggagaccctcatcacttccctcaagcccattggcaacatcgtcctcatc
tgctgtgctttcttcatcatctttggtattctcggtgtacagctgtttaaaggcaagttc
ttctactgcttcggccccgacgtcaagaacattaccaacaagtctgactgtctgcaagcc
aactacaagtgggttcaccacaagtacaactttgacaacctgggacaggctctgatgtcc
ctgtttgtccttgcctccaaagacggctgggttaacatcatgtatcacggcctggatgct
gttgctgtggaccaacagccggtgaccaacaacaacccgtggatgctgctgtatttcatc
tccttcctgctcatcgtcagcttcttcgtcctgaacatgtttgtcggcgtggtggtggag
aacttccacaagtgccgccagcaccaggaggtggaggaggccaagaggcgagaggagaag
cgtcagcggcgcatggaaaagaagaggaggaaagcccacaagctgccgtactacgccagc
tactgcaacgtgcgcctgatgatccacacactgtgcacaaaccactacctggacctcatc
atcaccttcatcatctgcatcaacgtcatcaccatgtccctcgagcacttcaatcaacct
cactctctggatcttgccctgaagtactgcaactatttcttcacctccacttttgttttg
gagtctgtgctcaaactcatcgccttcggctttcgacgcttcttcaaagaaaggtggaac
cagttggacctggccattgtgcttctgtccgtgatgggcatcattctggaggagattgag
atcagctccgctctgcccatcaaccccaccatcatcagaatcatgagagtactgaggata
gcacgagtgctgaagctgctgaagatggcgacaggaatgagggccctgttggatacggtg
gtccaagccctgcctcaggtgggtaacctgggcttgctcttcatgctgctgtttttcatc
tacgccgccttaggagtagagcttttcggagaactagtttgcaatgcggactacccatgt
gagggtatgagtcgtcacgctacttttgagaactttggcatggccttccttaccttgttt
caagtctccacgggcgacaactggaatggcatcatgaaggacacattgcgggagtgcccg
cccgaccacggcaccgacatggactacgcctgcaatccgagccttcagtttatctcgccc
atgtattttgtctccttcgtgctcaccgcccagttcgtgctcatcaatgtggtggtggct
gtgctgatgaagcacctggacgactccaacaaggaggcccaagaggaggcggagatggat
gcagaaattgagctggagctggcccagggcaccctctgttgcatgggcgcccccagttgc
gggggtgggggggtggagaagggactggtcgtcgcaggatcagggcccggaggcccggca
ggaggccgggagagaggagacggccgaggagaagcagggaggaagatgaggcacgcagca
gccactgcacaccaaggactgtacaactcccgcagctccagtcggaccctttactcacca
gcacaagagagccagtggctggacagcgtttctcttctgatcaaggacacgctagagggg
gagatgctgatgatcgacaacctctctggctctgtcttccaccactactcctcccctgca
cccatctgcaaagactgcaagagccacccgcaagagcagatcaggatggcagagattgag
caggcgtctctgaaatcagagcagctgtcggacaagtcttcgtcccctgcgctgccagac
gacctgagcctggacgagaacacttcctaccagctgctggcgcgagggggcaagggaagt
agcagcagtgactctgaggaggccggaggtggaggccaccagactcgaaccgtggtgcag
agtcaggtgcaggggctgggtcagccctgcagggccctctgcactggttctgagatggac
accactcttcaggagatggacctgcaaacacaccaagcacacatgcgttcacctcactgc
agccccggtggcgtttcaaggagcagcaacaaggacagaaacaaagaaggagcaggagga
gacagaggcatttctcctctcttccatctgcctgcagagttcttccaccccgcaggagta
atcatcccagcgcctccccgcagtaggagcctaaggttgacaaggagccataagctgact
tccccagcctcctgggcttcactccgctccccgggagcccatagagagatgctctgtaca
cagttcccgtcccacagtgactcgtcccttgctacaggcagctctgaaggtagcctccag
accaccctggaagagggactgagcttcagcatctctccgccacagaacttggagctgcca
ctgccaacagctcccttaccacttgtgtgccctctcccattgcctgaagataggactatc
ctctcctccccggtccagaccctgagaccaaggtccagtccctcgtcagctttaaccctt
caggccaccaggggccaccagcggagccagagcagcgggcgaggtagcaccagcccatgc
tacacccgcgacgactccattgacccttcagatgaagacctaggcataggcattggatcg
tcaattggtggttgtggctccagccaagcgggcaacagtgaacacttgtcagagacactg
agcagcttgtcactgacatcactgctgtcccccagctccctggtgtacccgggaggagca
gtgaagaagtgcaacagcacaggcagcctggaccaagggggggtgttgctgtcatcccgg
ggcaaggatggccgcagggagattctgggcctggagcttatggacccccagggcttcttg
gccaatccctggacaggggcattagtcgataaaagaagaggagacggaagtgtggaaata
ggagttggagaagaaggattcaaagggaagagctcaagccaaacaaccgtggggccttgt
cgaaaaaacagatga
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