Hippoglossus hippoglossus (Atlantic halibut): 117766714
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Entry
117766714 CDS
T07778
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117766714 (cacna1ha)
04020 Calcium signaling pathway
117766714 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117766714 (cacna1ha)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117766714 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117766714
NCBI-ProteinID:
XP_034449891
LinkDB
All DBs
Position
8:18142784..18240032
Genome browser
AA seq
2504 aa
AA seq
DB search
MTDGEGRARFQYAECQEGQEEVQEEVRLAIPTPYRNDAPGHDDDPGGGSDEEEEEEKEEI
ERRRGRRSSRGQGGEWSPEVQEHEEQEPELEVEVGPTLGVRIRAPIRDPDCVSEEEEQQP
YPALVPVAFLCLKQTTRPRNWCLRVVCNPWFEHVSMLVILLNCVTLGMFQPCEDVSCQLE
WCRTLKVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGVMEYSVDGH
NASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQL
WAGLLRNRCFLGEDVKTLYNKSLEPYYMSEEGEESPFICSAPRENGMLRCNDLPPYIEEK
MECSLEAPHQSSNGCVNWNRYYNVCQAGNFNPHKGAVNFDNIGYAWIAIFQVITLEGWVD
IMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENALMREQRARYMS
NDSTLASYSEPGSCYEEMLRYISHLYRKFTRRLQRIYSGWHSKRRKKVNPNGSGGGSNGG
GNGHGHGSSRGCGGSGPNSALWLRPIHNLLQHHQHQHCRLSNGGQHTISVGTAEHTDREG
GGEELEMKSLPVRRGSTHENNSGGSGAHPAVVSPGMGVLLGRLNGGMNYPTILPSFVCSY
SSKTPPPHSQQCRPGPEQHPTNHPASEHTETLNKLYKLMGQHSRQRLLYQLAGVVPSPLL
LELLSCPLCARSLETLELELGDLEGGRGEDGLHDFPQSGDLRGGRGRSRRRGVVEYKNGA
VRAWVNFREKLKRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEQLTDVLEISNIVFTSM
FVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLV
RFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFGLKTEDEDTIPDRK
NFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILV
EGFQAEGDANRSESDDEKKSDNFEEDEKVEQLRDTELKMYSLMMTANGHVDPRGSMAPPI
IMRTAATPMPTPKSSLGPESILGDELVGMPRYGEVGLGFSETGAGHTESRRGSSTSIDPL
AYDQHSLSLSSPGRRSPLPPRSWGSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGGEEE
NGGEAKGEAGGNNRLRPGSLELLQASTLLPSIIAEYGDCNGRTLTYDPNVNSDAKDDSSP
EEDLDDDSSLYYWIKKKLLDMKPRWCKEHEDWALYLFSPESLLRVWCQSVISHKIFDHVV
LVFIFLNCITIALERPGIQLGSTERVFLSVSNYVFTVIFFAEMAVKVVALGFCFGKQSYL
QSSWNVLDGLLVFVSLVDILVSLAYTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVV
ETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYICEGLDTKNVTNKSDCVPPNLRW
IRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLL
IVSFFVLNMFVGVVVENFHKCRQDQEEEETRLREEKRLKMIEKKRRSKENGGAEAKQRPY
YADYSPVRLSIHTLCTSHYLDLFITFIICINVFTMSIEHYNQPKYLEEVLKYCNYVFTFI
FVIEALLKLLAFGIHRFFKDRWNQLDIAIVALSIVGITLEELKMNAALPINPTIIRIMRV
LRIARVLKLLKMAKGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGRLKCTED
NPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECHKDDVHCLPYLPLVSPIY
FVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMAMERQRKQSTTSHGS
SVEGAYVGPCPQSPEQEEEVQCEDPDLLSSRKMSVSRMHSLPNDSYMFRPVRPASAPYAL
EEVDLSPQHHQHSGSVTSVQSQPCESGALLQVPDVSPVHPRSPPALTLPRIAPPTPSLSP
RALRKQVAVKVDSVETQGCEQQERPNPVHRPPPSPSPLSPHASSPSPHPPPPPPPSSPSA
LPLPPSLASAYPLPPASPSPLPPHLSCPSSLPPPPSSPALLLPPPRSPRLPLRPASLRRP
RPPSAASLCDPADEEVYHITSRRGRDEESKGKVGRSHSLSPYTSPHSLDSSPLPPPLPPS
SSKSTLNLLQAGLEDSDFRKGSSIDNQAFLDKPSSLAVGYPDDHRRHSIEVCLPQAVIPD
DEQPFAQEAHRSEKGGQAFPVRVQSVGGGHRKKKMSPPCISIHPPSEKEPPQTSSPPKLA
DCSMMLRRRTPSYDLTPHSQTPSPMHTALTPIHKPLQAHSPTHTLTLSRGSTPTHTQSYT
PPHPSTPTHPHIPISPNIFIQPHAPLGPNTFSQSRSHSPAARHSSLTGDCIPLPQFTFDQ
PQSRYMSGLSPGLSDADTATCSSPFDNRLGSAAGFSAKNRRTAQ
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcgcgctttcagtacgcagagtgccaggaggggcaggag
gaggtgcaggaggaggtgaggctcgccataccgacgccctacaggaacgatgccccgggt
cacgatgatgaccctggcggaggcagtgatgaagaggaggaggaggagaaggaggaaatt
gagaggagaagggggcgtaggagcagccgtggtcagggaggcgaatggagtcctgaggtt
caggagcatgaggagcaagaaccggagctggaggtggaagttggaccaacactgggagtt
cgcatcagggctcctatccgcgatccagactgcgtctccgaggaggaggagcagcagccg
tacccggccctggtgcccgtggccttcctctgcttaaagcaaacgaccaggcctcgaaac
tggtgtctccgtgtcgtctgtaacccgtggttcgagcacgtgtccatgctggtgatcctg
ctcaactgtgtgactctggggatgttccagccctgtgaagatgtctcctgccagttagag
tggtgccgcaccctcaaggtgttggacgactgcatcttcgctttctttgctgtggaaatg
gtcatcaagatggtggccctgggaatcttcggccccaattgttaccttggtgacaagtgg
aaccagcttgacttcgtcattgtcatggcaggggtgatggagtactctgtggatggtcac
aacgccagtctgtcagccatccgtaccgtccgagtgctcaggccactgcgggcgatcaac
agagttccaagtatgcggatcctggtgacgctgctgctggacactctgcccatgttagga
aacgtcctcctcctctgcttctttgtctttttcatcttcggcattgtgggagtccagctg
tgggcgggacttctgcgcaaccgctgcttcctgggagaggatgtaaaaacattgtacaac
aagtccctcgagccctactacatgtctgaggagggcgaggagagcccgttcatctgctcg
gctccgcgcgagaacgggatgctgcgctgcaatgatttgccgccctacattgaggaaaag
atggaatgctcactggaggctccgcatcaaagctcaaatggctgcgtaaactggaaccgg
tactataatgtgtgtcaagccgggaacttcaaccctcacaaaggagctgtgaacttcgac
aacattggctacgcctggatagccatattccaggtcatcacactggaaggatgggtcgat
atcatgtactatgtcatggacgcacactccttctacaattttatatattttatactgctc
attattgtgggctctttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttc
tctgagacgaagcagagggagaacgccctgatgagggagcagcgcgcacgctacatgtcc
aacgactccacgctcgccagttacagcgagcccggctcatgctacgaggagatgctacgc
tacatcagccacctgtatcgcaagttcacacgcaggctgcagaggatatactccggatgg
cacagtaaacgtcgtaaaaaggtgaatcctaatggaagcggtggcggcagtaacggcggg
ggtaatggacacggccacggttccagcaggggatgcggcggatcgggacccaatagcgca
ttgtggctgaggccgatccacaacctcctgcagcaccaccagcaccagcactgtcgcctc
agcaacggcgggcagcacaccatcagcgtgggaaccgctgagcacacggacagagaggga
ggaggggaggagctggagatgaagtcgcttcctgtgcggagaggaagtacacatgaaaat
aacagcggcggtagcggtgcccacccagctgttgtcagccctggcatgggggtattgctt
gggcggctgaatggtgggatgaactatcccaccatcctgccgtcttttgtgtgcagctac
agcagcaagacgccgccgcctcactcccagcagtgcaggccgggcccagagcagcacccg
acaaatcacccggcgtcggaacacacggagacgctgaacaagctctacaagctcatggga
caacacagtcgccagaggctgttgtaccagctggcgggtgtggtgcccagccctctgctc
ctggagctgctcagctgccctttgtgtgctcgcagcctggagaccttagagctggagctg
ggagacctggagggaggaagaggagaggacggactgcacgacttcccccagagcggagac
ctgagaggtggcagaggtcgaagcaggcggcggggggtggtggagtacaaaaacggagcg
gtccgggcctgggtgaacttcagggagaagctgaagaggatcgtggagagtaaatacttc
aatcgggggatcatgatcgctatcctcgtcaacaccctcagcatggggatcgagtaccac
gagcagcccgagcagctgactgatgtgttggagatcagtaacatcgtcttcaccagtatg
ttcgtcttggagatgggcttcatgctgctggcgttcggcttgttcggatacatcaggaac
ccgtacaacatattcgatagcatcatcgttatcatcagcgtgtgggaaatcattggccag
tcagacggcgggctgtccgtcctgcgaacgtttcgtctgctgcgggtcctgaagctggtt
cgcttcctgcccgccctgcggagacaactggtggtgctgatgaagaccatggataacgtg
gccaccttctgcatgctgctgatgcttttcatcttcacgttcagtatactgggtatgcat
ctgttcggctgcaaattcggtctcaaaacggaagatgaagacacaatccctgaccgcaag
aactttgactctttactttgggccattgtcaccgtgttccagattcttacccaggaggac
tggaacgtggtgttgtataatggcatggcctctacctctccgtgggcggccctctacttt
gtcgctctcatgacatttggcaactacgtgctcttcaatttgctggtggccatcttggtc
gagggcttccaggctgagggtgacgcaaacaggtccgagtcagacgatgagaagaaatca
gacaactttgaggaggacgagaaggtagagcagctcagagacaccgaactgaagatgtac
tccctgatgatgacagctaatggtcatgttgaccctcgcggctccatggctcctcctata
atcatgcgaaccgcagccacgcccatgcccaccccgaagagctccctgggacccgaatcc
atcctcggggatgagctggtggggatgcctcgatacggcgaggtgggactgggcttttcg
gagacgggagctggtcacacagaatctcgccgtgggagctccacctccattgacccgtta
gcctatgaccagcattctctgagcctctccagtcccggacgacgctcccctctccctccc
cgctcctggggaagccgccgctccagctggaacagcctgggaagagcgccgagcctcaaa
aggcgagacaccagcggagagagggagagcctgctgtccggtgagggaggagaggaggaa
aatggcggggaagccaagggggaggccgggggaaacaaccgattacggccgggctccttg
gagctactgcaggcgtctactctcttgccttccatcatagcggagtatggggactgcaac
ggcaggaccctgacttacgaccccaacgtgaactccgacgccaaggacgattcctcgcct
gaagaagatctggacgatgatagctctctgtactactggatcaagaagaagctccttgac
atgaagccccgctggtgcaaagagcacgaggactgggcgctgtacttgttctctccagaa
agcctattgcgtgtttggtgccaaagtgtgatctctcacaaaatattcgaccatgtggtt
ctggttttcatcttcctcaactgcatcaccattgctctggaaagacctggaatacagctg
ggcagcacggagcgagtctttctgagcgtgtccaactacgtcttcactgtgatcttcttt
gctgaaatggccgttaaggttgtagctctgggtttctgcttcggcaagcagagctacctt
cagtccagctggaacgttctggacggtttgttggtgtttgtgtctctggttgacattctg
gtctctctggcctacactggtggaaacaggatcctgggcatcctgcgagtcctgcgtctg
ctccgaactctacgtccactcagggtaatcagtcgagccccaggactgaagctggtagtg
gagactctcatcacctctctcagacccatcgggaacattgtcctcatctgctgcgccttc
ttcattgtcttcggcatcttgggggttcagctgttcaaggggaagttctacatctgtgaa
ggtctggacacaaagaacgtcaccaacaagtcggactgtgtgccgccgaatttacgctgg
atacgaaggaaatacaactttgacaatctgatccaggccctgatgtcgctgttcgttctg
tcgtgtaaggacggctgggtcaacatcatgtatgacgggctggatgcggtgggagtggac
caacagcctgtgagaaaccacaacccctggatgctgctctacttcatctccttcctgctc
atcgtcagcttcttcgtcctcaacatgttcgtcggcgtcgtggtggagaacttccacaag
tgccggcaggaccaggaggaggaggagacccgcctgcgggaggagaagaggctcaaaatg
atagagaaaaagcgcaggagtaaggagaatggaggagctgaggccaagcagaggccttac
tacgcagactactctccggtgcgtctgtccatccacacactgtgcaccagccactacctg
gacctcttcatcaccttcatcatctgcatcaacgtctttaccatgagcatcgagcactac
aatcaaccgaagtatttggaggaggtcctgaagtactgcaactatgtgttcaccttcatc
ttcgtcatcgaggccctgctcaaacttctggcatttgggattcaccggttcttcaaagac
aggtggaatcagctggatatagctatcgtggcgttgtccatcgtgggcatcaccctggag
gagctgaaaatgaacgcagcgctgcccataaacccgactatcatcagaatcatgagagtg
ctcaggatagcaagagtgctgaaacttctgaagatggccaaagggatgagagctctgctg
gacacggtcatgcaagcgctgccacaggtgggaaacctcggcctcctcttcatgctgctc
ttcttcatctacgctgcgctgggagtggagctctttggcagactgaaatgcaccgaagat
aacccgtgcgagggcctgagtcgtcacgcaacttttgaaaatttcgggatggccttcctc
acactgttccgtgtgtccactggagacaactggaatgggattatgaaagatacactaagg
gaatgtcataaagatgacgtccactgtctcccctacctgcccttggtctctcccatttac
ttcgtcaccttcgtgctcatggcccagttcgtcctggtcaacgtggtggtggctgttttg
atgaagcatctcgaggaaagcaacaaggaggctaaagaggatgcggagatggatgcagag
atcgccctggaaatggcgatggagaggcaacgcaaacaaagcacaacctcccacggcagc
tcggtggaaggagcctacgttgggccgtgtccacagtcccctgaacaggaggaagaagtc
cagtgtgaagacccagacctgctgtcgtcaaggaagatgtccgtatccaggatgcactcc
ctgcctaacgacagctacatgttccgacccgtgcggcccgccagcgccccctatgctttg
gaggaggtggatctcagtccccagcaccaccagcattcaggctcagtgacgtcggttcag
tcgcagccatgtgagagtggcgctctgctgcaggttccggacgtttcccccgttcacccc
cggtcgcctcccgccctcaccctgccccgcatcgccccgcccacaccgagcctgtctccc
cgtgccctgcgcaaacaggtggcagttaaagtggattcggtggagacgcagggttgcgaa
caacaggagaggccgaaccccgtccatcgtcctcccccgtccccttctcccctctctcct
catgcctcctccccatctccccaccctcctcctcctcctcctccctcctctccctcagcc
ctccccctcccacccagcttggcctctgcctacccgcttcctcctgcgtctccctcacct
ctgcctcctcacctgtcttgcccctcttccctccctcctccgccatcttctcccgcactt
ctcctccccccgcctcgctctccgcgtctcccgctgcgccccgcaagcctccggagaccc
agaccaccctccgccgcctccctctgcgacccggccgacgaggaggtgtatcacatcacc
agccgcagggggagggatgaggagagcaaagggaaggtcggccgaagccactccctctcc
ccttacacttctccacactctctcgactcctcgccgcttcctcccccgctaccgccctcc
tcctcaaagagcacgctcaatctgcttcaggcgggattggaggacagtgacttcaggaag
ggctcaagcatcgacaaccaggccttcctggacaagccctcatcactcgccgttggttac
cctgacgaccaccgccgccattccatcgaagtctgcctcccacaggccgtcatccccgac
gatgaacaacccttcgcacaagaggcccaccggtcggagaagggtggccaggcattccct
gtccgggtgcagtcagtcggggggggccacagaaagaagaagatgagtcctccctgcata
tccatccacccgccctcagagaaggaacccccccaaacctcctcacccccaaaacttgct
gactgcagcatgatgctgaggcgcaggacaccctcctatgatttgacgccacactcacag
acgccctccccgatgcacacggcgctcacacccatccacaaacctctgcaagcacactca
ccgactcacacactgacactctcgcgggggtctactccgacacacactcagtcatacacc
cccccgcacccgtccacacccacacacccgcacatccccatcagtccaaacatcttcatc
cagcctcatgcacctctcggtccaaacaccttctcacagtcacgctcccactcccccgcg
gcgaggcactcgtccctcacgggggactgcatccccctcccccagttcaccttcgaccag
ccacagtccagatacatgagcggcctatcacccggcctgtcagacgctgacacggccacc
tgctcctcccctttcgacaacagactgggaagtgctgcgggattcagtgcaaagaaccgg
aggaccgcccagtga
DBGET
integrated database retrieval system
