KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117766780
Entry
117766780         CDS       T07778                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hhip03041]
    117766780
Spliceosome [BR:hhip03041]
 Complex B
  Other components
   Complex B specific factors
    117766780
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_WDR75_1st LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_EIPR1 Beta-prop_VPS8 Mala_s_1-like TFIIIC_delta Beta-prop_IP5PC_F Cytochrom_D1 PROPPIN VPS8_N WD40_like DUF7165
Other DBs
NCBI-GeneID: 117766780
NCBI-ProteinID: XP_034450024
LinkDB
Position
1:complement(18785829..18793713)
AA seq 599 aa
MLLSLHPHASGRRCAAPRPCEAAAVTRFEIASALQEKENKKQKRRWRHKRSTCSGWSSAH
AFHVALARSEPPLRQSGAATAGDNTSAMAVEMEPSDVIRLIMQYLKENNLYRTLTTLQEE
TTVSLNTVESIDSFIADINRGHWDSVLLAIESLKLPDNTLIDLYEQVVMELIEMREVGAA
RSLLRQTDPMIMLKQTQPERYVHLENLLSCSYFDPREAYPKGSSKEKRRRAIAEALVREV
SVVPPSRLMGLLEQVGSLRLQQLPGHLSPESPIDTSGNKERHVVKESFPTQLYRHIKFGR
RSHVECACFSPDGKYLITGSVDGFIEVWNFYTGKISKDLKYQAQDSFMMMDDAVLCMCFG
QDTDLLATGSQNGKIKVWKIQSGLCLRRFEHAHSKGVTSLCFSMDSSQILSASFDQTIRI
HELRSGKTLKELNGHSSFVNDASFTQDGFHIISASSDGTVKIWNTKTSDCIHTVKSLSQT
SEVPINNVIPLPQNPEHFVVCSHSSKVVVLSMDGQTVKTFSSDGKEATDFVCCTLSPRGE
WIYCVGEDLVLYCFNYTTGRLEKTLTVHEKDVIGIAHHPHENLIATYSEDGLLRLWMPS
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgttgctttctttacatcctcatgcgtcagggaggaggtgtgcagcgccacgaccctgc
gaggcggcggcagtcacacggtttgagattgcttctgctctgcaagaaaaggagaacaaa
aaacagaaaaggcgctggagacacaagaggagcacgtgtagtgggtggtcctcagcacac
gcatttcacgtggctctggcgagaagcgagccgccactccgtcagtccggtgctgcaaca
gcgggggacaacaccagcgccatggccgtggagatggagccctcggatgtgatccgcctg
ataatgcagtacctcaaggagaacaacctctaccggaccctgaccaccttacaggaggaa
accaccgtctccctcaacacggtggagagcatcgacagtttcatcgcagatataaaccgc
ggccactgggactctgtcctgttagccatcgagtccctgaagctgccagacaacacgctg
atcgacctctacgagcaggttgtgatggagctgattgagatgagggaggtgggagcagct
cgctcgctcctcagacaaaccgaccccatgatcatgttgaagcagactcagccggagaga
tacgtccacctggagaacctgctgtcgtgctcctactttgaccctcgtgaggcgtacccg
aaggggagcagcaaggagaagcgacgcagggcgatagctgaggcgctggtgagggaggtg
agtgtggtgcctccttctcgcctcatgggactcctggaacaagttggttcgctgagacta
cagcagcttccaggtcatctctccccagaaagccccatcgacacgtctggcaacaaggag
agacatgtggtgaaagagagcttcccaacgcagctgtaccgacacatcaagtttggacga
cggtcacatgtggagtgtgcctgtttctctcctgatggaaagtacctcataaccggatcg
gtggacgggttcattgaggtgtggaacttctacactggaaaaattagtaaggatttaaag
taccaggcacaagacagcttcatgatgatggatgatgctgtgctgtgtatgtgctttggc
caggacaccgatcttctggcaaccggatctcagaatggcaaaataaaggtgtggaagatc
cagagcgggttgtgtctgcgcaggttcgagcacgctcacagcaaaggtgtgaccagtctg
tgcttctccatggacagcagccagatcctcagtgcctcatttgatcagaccatcagaatc
catgaactgaggtcaggaaagacactcaaggagttaaatggccattcatcgtttgtgaat
gatgcatccttcactcaagatggattccacatcatcagcgcctcatctgatggcaccgtg
aagatttggaacacgaagacgagcgactgcatccacactgtcaaatctctgtcccagacg
tcagaggtccccatcaacaacgtgattcctcttccccagaacccagagcactttgtggtt
tgcagccactcaagcaaagtggtcgtgttgagcatggacggtcagaccgtgaagacgttc
agctcagacgggaaggaagccacagactttgtgtgctgcaccctgtcgccccgcggggag
tggatttactgtgtgggagaggatctggtcctgtactgcttcaactatacgacagggagg
ctggagaaaacgctgacagttcatgagaaagacgtcatcggcattgctcaccatccacac
gagaatctgattgccacatacagtgaggacggcctcctgaggctgtggatgccgtcgtaa

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