KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117766804
Entry
117766804         CDS       T07778                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117766804 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhip03400]
    117766804 (aptx)
Enzymes [BR:hhip01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     117766804 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     117766804 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     117766804 (aptx)
DNA repair and recombination proteins [BR:hhip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     117766804 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     117766804 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_6 FHA zf-C2H2_4
Other DBs
NCBI-GeneID: 117766804
NCBI-ProteinID: XP_034450039
LinkDB
Position
1:complement(18776440..18779584)
AA seq 333 aa
MPVCWLVSEERRHKPIQLPHLQTVVLGRGPQTTIKDKKCSRQQVELKAECNKGYVKVKQL
GGNPTSVDSVVVGADNEVKMKPGQQLHIVNKLYPYTVQFKEDITGNHSGTKRPRESAPED
KESQREAQKMKAAKETEKVSVSVSPGEATKTSESVGHWSQGLKTSMQDPKMQIYKDDKVV
VIKDKYPKARYHWLVLPWQVIPSLKALRDEHCDLVKHMQQVADRMVQQCPDSSSLSFRTG
YHVIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESQDVVQMLETNGRVTVKEGS
SELLKLPLRCHVCRKELPTIPALKEHLKSHFPR
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgccggtttgttggctcgttagcgaagagaggcgtcacaaacccattcagctgccccac
ctgcagactgtcgtcctgggtcgaggtccacaaaccaccattaaagacaagaagtgctcc
cgacagcaagttgaattgaaagcagaatgcaacaaaggttatgtcaaagttaaacagctg
ggtgggaatcccacctccgtagactctgtagtggtgggtgcagacaatgaggtcaaaatg
aagccggggcagcagcttcatatcgtcaataagctctatccgtacactgtacagttcaag
gaggatatcactggtaaccacagtggcaccaaaagacctcgggagtcggctccagaggac
aaagagagccagagagaggctcagaaaatgaaagcagccaaagagacagagaaggtctct
gtgtcagtcagtcctggagaagctacaaaaaccagtgaaagtgttggtcattggagccaa
ggtctgaagacgtcgatgcaagacccaaagatgcagatatacaaagatgataaagtagtc
gtaatcaaagataaataccccaaagctcgctaccactggctggtcctcccatggcaggtc
atccccagtctgaaggcgctgcgtgacgagcactgtgacctggtgaaacacatgcagcag
gttgctgaccggatggttcagcagtgccctgattctagctcactaagtttccgcacaggg
taccatgtcatcccgagtatgagtcatgttcatctccatgttattagccaggactttgac
tctccttgtttaaagaacaaaaaacactggaactctttcaccactgactacttcattgag
tctcaagatgtcgttcagatgcttgaaaccaatggaagagtcacagtgaaagaaggcagc
agtgagttgttgaaacttcctctccgatgtcacgtgtgtcgcaaagagctccccactata
ccagctctgaaggagcacctgaagtctcactttcccagataa

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