Hippoglossus hippoglossus (Atlantic halibut): 117766838
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Entry
117766838 CDS
T07778
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117766838 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117766838 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117766838 (coro1a)
04147 Exosome [BR:
hhip04147
]
117766838 (coro1a)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Phagocytosis
Coronins
117766838 (coro1a)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117766838 (coro1a)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117766838 (coro1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Trimer_CC
Beta-prop_IFT140_1st
WDCP
Beta-prop_HPS5
Beta-prop_WDR19_1st
FlaC_arch
DUF7310
Motif
Other DBs
NCBI-GeneID:
117766838
NCBI-ProteinID:
XP_034450101
LinkDB
All DBs
Position
8:10990272..10999582
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AA seq
456 aa
AA seq
DB search
MSRKVVRSSKFRHVFGQALKADQCYDDIRISQMTWDSGFCSVNPKFVAMIVDASGGGAFM
VLPLSKTGRIEMSQPTVCGHTGPVLDIEFCPHNDNIIASSSEDCSVMIWEIPDGGLTAPL
TDPVVKLDGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVARGEAVVRIDSIHPDLIYS
ASWNRDGSMILTTCKDKTMRVLDPHKGTVLFEKEKAHDGSRPIRAVFVSNGKILTTGFSR
VSERQVALWDPKNFGEALTLQELDTSSGVLMPYFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMAKRGLEVNKCEIARFYKLHDRKCEPIVMTVPRKSDLFQE
DLYPDTIGPEPSVEADEWFQGKNAQPILISLKDGFVATTKAKEFKVHKTLLKTTVASAGG
PPENSGEVQSLRKEVKDLSAAIEELTKRVRELESKQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggttgtgaggagcagtaagttccgccacgtctttggccaggctctaaaa
gctgaccaatgctacgatgacatccgaatctcccagatgacctgggacagcggcttctgc
tccgttaaccccaagttcgttgccatgatcgtggacgcgagcggcggaggagccttcatg
gtgctgcccctgagcaagacggggcgtatcgagatgagtcagcccactgtgtgcggccac
acaggtcccgtcctggacatcgagttttgtccacacaatgacaacatcatcgccagcagt
tctgaggactgtagcgtcatgatctgggagatcccggatggcgggctgacagcccctctc
acagatcccgtggtgaagttggacggccactccaaacgtgttggcatcctgagctggcac
cccactgcccacaatgtgctgatgagtgcaggctgtgataacgtggtgatcctctggaat
gtggctcgtggggaggcggtggtgaggatcgacagcatccaccccgacctcatctacagc
gccagctggaacagggacggctccatgatcctcaccacctgcaaggacaagaccatgcgg
gtgctggacccacacaagggcaccgtcctctttgagaaggagaaggctcatgatggctcc
aggccgatcagggcggtgttcgtgtccaacggcaagatcctcactacgggcttcagtcgt
gtgagtgagaggcaggtggcgctgtgggatccgaagaacttcggtgaggcgctgaccctg
caggagctggacaccagcagcggtgtccttatgccttattttgacccggacactggcatc
gtctacctctgtggcaagggggacagcagcatccgatactttgaggtgacggacgaagct
ccttatgttcactacctctccatgtacagcagcaaggagagccagaaggggatgggatac
atggccaagagaggcctggaggtcaacaaatgtgaaattgccaggttctacaaactccat
gacaggaaatgtgagcccatagtcatgacagtaccacgcaagtctgacctgttccaggag
gatctgtacccggacaccatcggccctgagccctcggtcgaagctgacgagtggtttcaa
ggcaagaatgcccagcctattctgatatccctaaaggatgggttcgtagcaaccaccaag
gccaaggagttcaaagttcacaagactctcctgaagaccacggttgcttctgctgggggt
ccaccagaaaacagcggggaggtccagtccttgaggaaggaggtgaaggacctcagtgca
gcgatagaggagctgaccaagcgtgtgagggagctggagagcaagcaataa
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