Hippoglossus hippoglossus (Atlantic halibut): 117766883
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Entry
117766883 CDS
T07778
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117766883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117766883
Transporters [BR:
hhip02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117766883
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117766883
NCBI-ProteinID:
XP_034450192
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Position
8:2285139..2319006
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AA seq
584 aa
AA seq
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MESKMEKRETWMKKREYFLAVAGNVVGLGNVWRFPYLCYKNGGGVFLFPYLIFAVLCGLP
LFLLETVIGQYTQEGAITCWTKICPLAKGIGYSINVIQVYATIYILILAWALLYLISSFR
GTLPWATCSNPWNTDRCVELTSANWTALHNGNLTANWTSGNLTKSSVSEFWERGVLSMSG
GIDEIGTVKWELLLCLLACWVACYFCIWKGVRSTGKVVYVTAVFPYVMLVILLVRGLTLP
GAWQGVVYYLYPEPSRLADLQVWMEAGTQVLFSYGVGAGTLTTLGSYNKFKNNCYRDSLW
LCLLNSCTSFIAGFAVFSALGFMAQAQGIPINMVVDSGPGLAFIAFPQAAAMMPLPQLWA
ACFFIMLILLGLDTTFTGLETITSSVIDLFPETMRRPWRREILLLLLCSVCFILHILLTT
QGGIYLFQLIDYYGASGACITCVSLVQCVAVGWVFGAERMCDAVEEMTGQRPWLLFKLCW
CCFTPLICMVGFIGSFVDYQPLTFGNYVYPDWSYYLGWAIALSSIIVIPIWAIGKICLTK
GSLRQRLLVLCHPDSDHVGPKTNKENLLSETEIIPMSAPLPGML
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaaaatggaaaagagggaaacgtggatgaagaaaagggaatattttctggca
gtagcagggaatgttgtgggcctgggcaacgtgtggagattcccatacctgtgctataag
aatggaggaggtgtcttcctgtttccttatctcatctttgctgtgctgtgtggtttgcca
ctcttcctgctggagactgtgattggtcagtacacacaggagggcgccatcacctgctgg
accaagatctgcccacttgcaaagggaattggctattctatcaacgtgatccaggtgtat
gccaccatctacatccttatcctggcctgggccctcctctaccttatctcctctttcaga
ggcacactgccctgggctacctgcagcaatccctggaacacagacagatgtgtggaactc
acatctgcaaactggactgcactacacaatggcaacctgacagcaaactggacatctgga
aatctcaccaagtcttcagtctctgagttctgggagagaggagtgttgtccatgtctggg
ggaatagacgagattggcacagtgaaatgggagctcctgttgtgtctcctggcctgctgg
gtggcctgctacttctgcatctggaaaggtgtccgctccacaggaaaggtggtgtatgtc
acggcagtgttcccctatgtaatgttggtcattctgctggtcaggggcttgacactacca
ggagcctggcagggtgtggtctattacctttatccagaaccttctcgtctggcagacctt
caggtgtggatggaagccggcactcaggtcctcttctcctatggtgttggagcagggaca
ctaaccacactgggcagctacaataaattcaagaacaactgttacagggacagtctgtgg
ttgtgtctgctgaacagttgcaccagcttcattgctgggtttgctgtcttctctgctctg
ggctttatggctcaggctcagggaattcccatcaacatggttgttgattcagggcctggg
ctggcgttcattgcatttcctcaggctgcagccatgatgcccctgcctcagttgtgggct
gcctgcttcttcatcatgctcattctgttgggtctggacacaacgtttacaggtttggaa
acaataacatcatcagtgattgacttgttcccagagacgatgcgcagaccctggcgtaga
gaaatcttactcctcctcctctgctctgtctgcttcatcttgcatatccttctcaccact
cagggaggaatctatctgttccagctgattgattactatggtgctagtggagcatgtata
acctgtgtgtctctggtccagtgtgtagctgttgggtgggtctttggtgctgagcggatg
tgtgatgcagttgaggagatgacaggacagaggccgtggcttcttttcaaactgtgttgg
tgttgctttacaccactgatctgcatggttggcttcatcggctcctttgtggactatcag
cccctgacatttgggaactatgtgtatccagactggtcctactatctgggctgggccata
gccctctcctctataattgttatacccatctgggctattggcaagatctgcctcaccaag
ggctccctcagacagcgtctgttggtcctgtgtcatcctgatagtgaccatgttggtccc
aagacaaacaaagaaaatctcttgagtgaaactgaaataataccaatgtcagctcctctc
cctggcatgttatga
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