Hippoglossus hippoglossus (Atlantic halibut): 117766892
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Entry
117766892 CDS
T07778
Name
(RefSeq) protein jagged-1a-like isoform X1
KO
K06052
jagged-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04330
Notch signaling pathway
hhip04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117766892
04371 Apelin signaling pathway
117766892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hhip04090
]
117766892
CD molecules [BR:
hhip04090
]
Proteins
117766892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_2
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
117766892
NCBI-ProteinID:
XP_034450217
LinkDB
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Position
1:30537325..30561651
Genome browser
AA seq
1231 aa
AA seq
DB search
MSRTRSSVLLLLRLLLLCAGVQVSSASGRFELHILSMQNVNGRLQSGACCDGAPDVKEER
CTVDECDTFFRVCLKEFQLKVSSGPCSFGIASTPVLGGNSFSLPNTKSDKSRIMLSFSFA
WPRSYTLIVEALDFNNDSSSSAIERAVHSGMINPSRQWQDLNHNGPVAQFRFQVRLSCDE
HYFGFSCNKFCRPRDDFFGHFECDHNGNKTCLEGWSGPDCSTAICRQGCSTEHGSCKVPG
ECRCLYGWQGDYCDQCISHPGCVHGSCVEPWQCLCDTNYGGQLCDKDLNTCGTRQPCLNE
GTCSNTGPDKYHCSCPDGFSGVNCQSADHACLSNPCVNAGRCVETSQGFECRCSPGWTGP
SCSINVDECLVNPCGHGGTCQDLVNGLKCICPPQWVGKTCLIDANECNDDPCVNANSCRN
LIGGYFCECVLGWTGQNCDMNVNDCRGQCHNGATCEDLVNGYKCVCLAGFIGEHCDKDVD
ECTSGPCLNGGRCHNDVIGFHCLCPPGFSGSRCQLDVDHCLHSPCQNGGQCFNLVNDYVC
KCPEDYEGRNCSRLKDHCRSTPCKVIDSCTVAVASNSTPSGVRLILSNVCGPHGRCRSHV
GGQFSCECEGGFTGTYCHENINDCEGAPCLNGGTCMDQISRYQCVCAEGWDGATCRHDVD
DCSSDPCHNAGVCRDLVNDFYCHCHNGWKGKTCHSRERQCDESTCNNGGTCHDEGDAFRC
VCAVGWDGNTCNIAKNSSCLSRPCENGGTCVVDGDVFNCVCKEGWEGATCSHNANDCSAH
PCYNSGTCVDGDNWYRCECAAGFTGPDCRINVNECQSSPCGLGYACVDEINGYRCICPPG
SSGPHCQEVMGGSCVVGGLVALDGSRWDEDCNTCHCHKGRITCSELWCGPKLCSFQGPTH
GSECPAGQTCIAVPDERCFVQPCHSQGECWSPAYRALPTARCRPESSCTNVTFSFNKDVM
AKGVTVERICRELRTLYVVQNLSSDSSISMTCEPSLSTSNEIHVAISPDNQSGGTTFVKE
ITDRIMDLVSKRNANSSIIGAIAEVRVQRRQSRSRNDLLVPLLVSVAIAIWVLSVASMLQ
WCLKRRRKQSVHTAVSTQASSSLAATAEENNALHNSVSAARDQLNHIKNLIEKNPPNHHQ
HLLLLHHHHLHKDQNSVNAKIRKSDTGSQSGNDKVDKRLQKGRFPRAPPAYLLVDWEECP
PNLPTGSKLWTNKQDNRQLQSQSVSRAEFIV
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggacccggagctcggtcctcctgctgctccgcctgctgctgctctgtgcaggg
gtccaggtctcttcagcttctggacgctttgagcttcatattctgtcgatgcagaatgta
aacgggcgcctgcagagcggcgcctgctgcgatggagccccggacgtgaaggaggagcgt
tgcacggtggacgaatgtgacaccttcttccgggtgtgtctgaaggagttccagctgaag
gtgtcctcggggccctgcagcttcggcatcgcctccacgcccgtgctcggtgggaatagc
ttttcattgcccaacaccaagagtgacaagtccaggatcatgttgtcgttcagctttgcg
tggccgaggtcatacacgttgatagtggaagctttggacttcaacaacgactcgtcctct
agcgcgatcgagagggccgtccactcggggatgatcaacccgagccgtcagtggcaggac
ctgaaccataacggccctgtggcccagttccgcttccaggtccgcctcagctgcgacgag
cactacttcggcttcagctgcaacaagttctgccggccacgagacgacttcttcggacac
tttgagtgtgaccacaacggaaacaagacgtgcctggagggctggtccggtccggactgt
agcacagcgatctgtcgacagggctgcagcacagaacacgggtcgtgtaaagttcctgga
gagtgcaggtgtctgtatggatggcagggtgattactgtgatcagtgtatctctcacccc
ggctgtgttcacggcagctgtgtggagccctggcaatgtctgtgtgacaccaactatgga
ggacagctgtgtgacaaagatctgaacacgtgtgggacacggcagccatgtttgaatgaa
ggaacctgcagcaacacgggacctgataaataccactgctcctgtcccgacggattctcc
ggggtcaactgtcaaagcgccgaccacgcctgtctgtccaacccctgtgtgaatgcgggc
cgctgtgtggaaaccagtcaggggtttgagtgtcgctgttcccccggctggaccggaccc
tcctgctccatcaatgtggacgaatgtctggtgaacccctgtggtcatggagggacgtgt
caggacctggtcaatggtttgaagtgcatctgtcctcctcagtgggtgggaaagacctgc
ctcatagatgccaacgagtgcaacgacgacccctgtgtcaacgccaactcctgtcggaat
ctgattggcggatacttctgcgagtgcgtcctcggttggacgggccagaactgcgatatg
aacgttaacgattgccgcggccagtgtcacaacggagctacgtgcgaggacctggtgaat
ggttataagtgcgtgtgcctggcgggtttcatcggcgaacactgtgacaaggacgtggac
gagtgcaccagtgggccgtgcctcaacggcggccgttgccacaacgacgttattggcttc
cactgcctgtgtccgcccggtttctctggaagtcgctgtcagttggacgtcgatcactgc
ctccatagtccgtgtcaaaatggcggccagtgtttcaacctggtgaacgactacgtctgc
aaatgtcctgaagactacgagggcaggaactgctcacgcctgaaggaccactgccgcagc
acgccctgcaaagtgattgacagctgcactgtggcagtggcgtccaacagcacaccgagt
ggggtgcgtttgattttgtccaacgtgtgcggcccacacgggcggtgtcggagccacgtc
ggcggacagttcagctgcgagtgtgagggcggcttcacgggcacgtactgtcatgagaac
attaatgactgtgagggcgccccctgtctgaatggaggcacctgtatggatcagatcagt
cgttatcagtgtgtctgtgctgaaggctgggacggcgccacctgccgacacgacgtggac
gactgcagctcagatccctgtcacaacgccggcgtctgtcgggacctcgtcaacgacttc
tactgccactgtcacaacggctggaagggaaagacctgtcactcaagagaacgtcagtgt
gacgagtcgacctgtaacaacggaggaacttgtcacgatgaaggcgacgccttcaggtgt
gtttgtgctgtcggctgggacggaaacacgtgtaacatcgcaaagaacagcagctgcctg
tcacgtccctgtgagaacggaggcacctgcgtggtggacggagacgtctttaactgtgtc
tgtaaggaaggctgggagggcgccacctgcagccacaatgccaatgactgcagtgctcat
ccctgttacaacagtgggacgtgtgtggacggagacaactggtatcgatgtgaatgtgct
gcagggttcaccggcccagactgcaggatcaacgtcaacgagtgccagtcgtcaccctgc
ggcctcggctacgcctgcgtggatgaaatcaacggttaccgctgcatttgtccaccaggg
agcagcggtccccactgccaggaagtgatgggggggtcctgtgtggtcggtgggctggtg
gctctggatggaagcagatgggatgaagactgcaacacctgccactgccacaaggggaga
atcacctgctctgagctttggtgcggaccgaaactttgtagcttccagggtccgactcac
ggctcagagtgtccggccggtcagacctgcatcgccgtcccggacgagcgctgctttgtc
cagccctgccacagccagggggagtgctggagccccgcctaccgggccctgcccacagcc
aggtgtcgcccagagagcagctgcaccaacgtcaccttctccttcaacaaggacgtcatg
gcaaagggtgtgacggtggagcggatttgcagagagctcaggaccctctacgttgtccag
aacctatcgtcggactcttccatctctatgacctgcgagccctcgctcagcaccagcaac
gagatccatgttgccatctcgccagacaaccagagcggaggaacgacattcgtcaaggag
atcaccgacaggatcatggatctggtcagcaagaggaacgccaacagcagcatcatcggc
gccatcgccgaggtccgcgtgcagcgacgacagagccgcagccgcaacgacctcctggtg
cccttgctggtctccgtggcgatcgccatctgggtgttgtcggttgcttcgatgttgcaa
tggtgcttgaaaaggcggaggaagcagagcgtccacactgcggtcagcacccaggcctcg
tcatctttggcagccacagcggaggaaaacaacgccctccacaacagcgtcagcgccgcc
cgcgaccagctcaaccacatcaagaacctcattgagaaaaacccaccaaaccaccatcag
cacctcctcctgctccatcatcaccacctccacaaggaccagaactccgtcaacgccaag
atcaggaagtcagacaccgggagccaatcaggcaatgacaaggtggacaagaggctgcag
aagggaaggttccccagggcgccaccagcgtacttgctggtcgactgggaggaatgcccc
cccaatctgccaacaggctcaaaactctggaccaacaaacaggacaacaggcagctgcag
tcacagagcgtcagcagggcggagtttatcgtttaa
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