Hippoglossus hippoglossus (Atlantic halibut): 117767037
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Entry
117767037 CDS
T07778
Symbol
cacnb1
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1 isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04260
Cardiac muscle contraction
hhip04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117767037 (cacnb1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117767037 (cacnb1)
04261 Adrenergic signaling in cardiomyocytes
117767037 (cacnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117767037 (cacnb1)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117767037 (cacnb1)
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GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
117767037
NCBI-ProteinID:
XP_034450456
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Position
8:9444514..9476284
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AA seq
624 aa
AA seq
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MERTERIQRPFMGSADSYTSRPSDSDVSLEEDPEALRKEADRQALATLEKAKTKPVAFAV
RTNVGYNPGPSDDVPVQGMAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKL
ENTRLLQEQRMRQNRLSSSKSGGSSSLDVATGTRRPTPPGTANMDMSTVTFDVDPLDLDA
EEPPESLGGDPRSSKGMSGSVTSPQANAHRLPFFKKMEHVPPYDVVPSMRPIILVGPSLK
GYEVTDMMQKALFDFLKHKFEGRIAITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLD
VLAEVQSEIERIFELARTLQLVALDADTINHPSQLAKTSLAPIIVYIKIASPKVLQRLIK
SRGKSQAKYLTVQTAAADKLAQCPPELFDIILDENQLEDACEHLADYLEAYWKATHPPSS
NPPNPLLNRTMATAALAASPEPVSNLQGSYLGRGEQKREGPLTDCGGSGTLHDFQTDLGG
KPQQQQQTYLRSSRGQPRGSSGRGLSRQDTFDSETQGSRDSAYTEAGDSCMDIETDPYEE
PEPYRGSGGSRLHLAQHHGRQASWEDEGAEPDQENLNHPPIPSQTQPHGRAKLKERYCQD
PVDTGANMSHNKNQDEWGRDVYIR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaccgagaggattcagagacccttcatgggctcggcagactcctacaccagc
cggccgtcggactcagatgtgtccctggaggaggacccagaggctctgaggaaggaggct
gacagacaggcgctcgccacactcgagaaagcaaagaccaaaccagtggcgtttgctgtg
cggacaaatgtcggttacaaccccggccccagcgatgacgttcctgtgcagggcatggcc
atatcgtttgaagccaaagacttcctgcacattaaagagaagtacaacaacgactggtgg
atcgggcgtctggtgaaggaaggttgtgaggtgggcttcatccccagcccggtcaaactg
gagaacacccgtctgctgcaggagcaaaggatgagacagaaccgactcagctccagtaaa
tctggaggaagctccagtctggacgttgccacgggaacccgcaggcccacccctcctggc
acagctaacatggacatgtccactgtgacctttgacgttgaccccctcgacctggatgct
gaggagccccctgagtccctggggggtgaccctcgctcctccaagggcatgtcaggcagc
gtaacgtcccctcaggccaacgcccaccgactgcccttctttaagaagatggagcatgtc
ccaccgtacgacgtggttccctccatgagacccatcatcctggtcgggccgtcactcaaa
ggctacgaggtgacagacatgatgcagaaagcgctctttgactttctgaaacacaagttc
gagggcaggatagccatcacacgggtgacagccgacatctccctggccaaacgctccgtc
ctcaacaaccccagcaaacacaccatcattgagcgctccagtacccgctccagcctggac
gtactggcggaggtgcagagtgagatcgagcgtatctttgagctggcccgcaccctccag
ctggtcgctctggatgcagacaccatcaaccacccctctcagctggcgaagacctccctc
gcccccatcattgtctatatcaaaatagcctcacctaaggttctccagagactcattaaa
tccagagggaagtctcaggctaaatacctaactgtgcagacggcggcagcagacaaactg
gctcagtgccctcctgagctgtttgacatcatcctggacgagaaccagctggaggacgcc
tgcgagcacctggccgactacctggaggcttactggaaggcgacgcaccccccgagcagc
aacccgcccaaccccctgctcaaccgcaccatggccacggcagccctggccgcctccccc
gagcccgtctccaacctgcaggggtcgtacctggggcgtggcgagcagaaacgagaaggg
cctctgacagattgcggcgggagcggcactctacatgactttcagacagacctgggagga
aagcctcagcagcagcagcagacgtacctgcgctcctcccgtggccagccacgaggaagc
agcggccgaggcctttcaaggcaggacaccttcgactccgagacccagggcagccgggac
tcggcctacaccgaggccggtgactcctgcatggacattgagactgacccctacgaggag
cccgagccttaccgaggcagcgggggcagccgcctgcacctagcgcagcatcacggcaga
caggcatcctgggaggacgagggcgccgagccggaccaggagaacctcaaccaccctccg
atcccgagccagacgcagccgcacggacgagccaagctgaaggagcgttactgccaggac
cctgtggacacaggggccaacatgagccacaacaagaatcaggacgagtgggggagggac
gtctacatccgctga
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