Hippoglossus hippoglossus (Atlantic halibut): 117767239
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Entry
117767239 CDS
T07778
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117767239 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117767239 (thoc5)
03041 Spliceosome [BR:
hhip03041
]
117767239 (thoc5)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117767239 (thoc5)
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117767239 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
117767239
NCBI-ProteinID:
XP_034450582
LinkDB
All DBs
Position
9:complement(17883365..17890644)
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AA seq
714 aa
AA seq
DB search
MFALRGVTKCEVRLHSLTINRPRRILYSKAMSSDALKKRKSKVVRSEGGTPEMKRGRGEG
DQQDARVYNEEVELDGRDPEQDYLQYKESCESLATLMNEIQELKSNGAKEGCAEVEQRRM
QSCIHFMNLKKLNRLAHMRLKRGRDQTHDAKQKVDVLHLQLQNLLYEVMHLQKEISKCLE
FKSKHEEIDLVSEEEFYQEAPAEISRPNLTKNDPHQLTLARLDWELEQRKRLAEKYKESQ
STKEKNQKSIEVKKEHLTSLQPGLNAIMQASVPVQEYLSMPFEQTQKQTEIARHLPPPLY
VLFVQANAYGQACDKNLSVSISGDVEEAKALSKPPEDSQDDDSDSDAEEEQEKTKRRRPT
TGGQLDDKRREMLKRHPLSLCLDLKCKDGSILHLFFYYLMNLNIMTVKTKVSTTTDLTTA
ISAGDLLKSETLVSCLYSSDQGRETPNPANRYQFDKVGIVCFADYVEELGHPYMWVQSLG
GLHFPSDASDGVRVGSSLSASHMENTMKLLRGRVQSRLALHKQFASLEHSIIPVSAECQH
LFPAKVVSRLARWTTIAHQEYMDLPYTRHVTEAGLAKETGLYFMAVVERGTARLQAAVVL
SPRYPAISPLFSLSLSWKGERSGRTDDNLRAMECEVNVFKNELQGPRPGHQLLTNQIERL
CVCLDVYLETEGQDDSVEGPREFPREKMCLRTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgcttcgcggtgtgacaaagtgtgaagtacgtttgcattcgctcacgattaat
agacccaggcgtattttatactccaaagccatgtcgtcggacgccctgaagaagcgaaag
tcgaaggtcgtccgcagtgaaggaggaaccccggagatgaaacgaggtcgcggagagggg
gaccagcaggatgcacgtgtgtataatgaggaggtggagctggatggccgtgacccggag
caagactatctgcagtacaaagagtcgtgtgagagtttggccacgctcatgaatgagatc
caggagcttaaatctaatggagccaaggaggggtgtgccgaggtcgagcagagacgtatg
cagagctgcatccacttcatgaatctgaaaaaactcaatcgtctggctcacatgcgacta
aagagaggcagagaccaaacacatgatgcaaagcagaaagtggacgtgctgcaccttcag
ctacagaacctgctgtacgaagttatgcatcttcagaaggagatcagcaagtgtctagag
ttcaaatccaagcacgaggagatagacttggtctctgaggaagagttctaccaggaggcc
ccagcagagatatccaggcccaacctcacaaaaaatgacccccaccaactcacactggct
cgactggactgggagcttgaacagagaaagaggttggcagagaaatacaaggagtcacag
tccacaaaggagaagaaccagaagagcattgaggtgaagaaggaacatctgacaagttta
cagccaggactgaacgccatcatgcaggcctctgtcccagtgcaggagtacctctccatg
ccttttgaacagacacagaaacagactgagatcgcccgccatctccctccacctctgtat
gtcctgtttgttcaagccaatgcctacggccaggcctgcgacaagaacctgagtgtgtca
atcagtggtgatgtggaagaggccaaggccttgtcaaaacctccagaagattcccaggat
gatgatagtgattcagatgctgaggaagagcaagagaaaacgaagaggagaaggccaact
acaggtggtcagctggacgacaaaagacgagagatgctgaagaggcatcctctgtccctc
tgcttagacctcaagtgtaaagatggcagcatcctccatctcttcttctactacctgatg
aatctgaacattatgacggtcaagaccaaggtctccaccaccacagacctgaccacagcc
atcagtgcaggagatttgctgaaatcagagactctagtcagctgtctctactctagtgac
cagggacgggaaacacccaatccagcgaatcgttaccagtttgataaagtggggattgtt
tgctttgctgattacgtggaggagctgggccatccctacatgtgggttcagagtctcgga
ggactgcattttccgagtgatgcttcagacggtgtgcgtgtgggcagttcactgagtgcc
agccacatggagaacaccatgaagctgctgaggggacgggtccagtcccgcttggctttg
cacaaacagtttgcctctttagagcacagcatcatcccagtctctgctgagtgtcagcac
ctgtttcctgccaaggttgtctcccgtttagctcgctggaccacgatcgctcaccaggag
tacatggatctgccatatacgcgtcatgtgactgaggctggtctggcaaaggagactggt
ctgtacttcatggcagtggttgaacgaggcacagctcgtctccaggccgcagtggtgctg
agtccacgttacccagcgatctctcctcttttctccctctccctcagctggaagggtgaa
cgcagtggacgcactgatgacaaccttcgagccatggaatgtgaggtcaacgtgttcaaa
aacgaactacagggaccacgtccaggacaccagctcctgaccaatcagattgaacgcctt
tgtgtctgcctggatgtgtatttggagactgaaggacaagatgacagcgtggagggacca
cgagagttcccccgtgaaaagatgtgcctgcgcacagtcaggggtccaaatcgtctgaag
ccgttcaagtacaaccaccctcaaggcttcttcagtcatcgctga
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integrated database retrieval system
